FFCP PHASE1:Mm9::chr5:110973394..110973419,+: Difference between revisions
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{{FFCP|EntrezGene=231605|HGNC=|MCL_coexpression_id=1|UniProt=G3X942|association_with_transcript=30bp_to_ENSMUST00000040001,NM_198306,uc008yqz.2_5end|description=CAGE_peak_2_at_Galnt9_5end|id=chr5:110973394..110973419,+|ontology_enrichment_celltype=CL:0000117!2.19e-19!23;CL:0000337!2.19e-19!23;CL:0000540!2.91e-12!33;CL:0000047!2.91e-12!33;CL:0000031!2.91e-12!33;CL:0000404!2.91e-12!33;CL:0000221!2.03e-10!44;CL:0000133!2.03e-10!44;CL:0002319!6.04e-10!43;CL:0000393!3.54e-09!39;CL:0000211!3.54e-09!39;CL:0000055!1.99e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.48e-21,23;CL:0000337,4.48e-21,23;CL:0000540,1.75e-13,33;CL:0000047,1.75e-13,33;CL:0000031,1.75e-13,33;CL:0000404,1.75e-13,33;CL:0000393,8.19e-11,39;CL:0000211,8.19e-11,39;CL:0002319,1.87e-09,43;CL:0000221,3.73e-09,44;CL:0000133,3.73e-09,44;CL:0002610,2.54e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.75e-35!52;UBERON:0005068!1.75e-35!52;UBERON:0006241!1.75e-35!52;UBERON:0007135!1.75e-35!52;UBERON:0000073!2.52e-34!75;UBERON:0001016!2.52e-34!75;UBERON:0000955!4.54e-34!50;UBERON:0006238!4.54e-34!50;UBERON:0001017!2.46e-33!73;UBERON:0005743!2.46e-33!73;UBERON:0002616!4.12e-33!49;UBERON:0000033!2.51e-31!63;UBERON:0003080!9.69e-28!40;UBERON:0002020!1.52e-27!34;UBERON:0002346!7.82e-27!71;UBERON:0003075!7.82e-27!71;UBERON:0007284!7.82e-27!71;UBERON:0002780!9.06e-27!39;UBERON:0001890!9.06e-27!39;UBERON:0006240!9.06e-27!39;UBERON:0004121!1.45e-25!102;UBERON:0000924!1.45e-25!102;UBERON:0006601!1.45e-25!102;UBERON:0003056!3.95e-25!49;UBERON:0002791!2.83e-23!29;UBERON:0003528!2.83e-23!29;UBERON:0001893!2.83e-23!29;UBERON:0007811!3.64e-20!86;UBERON:0000153!1.14e-18!94;UBERON:0000956!2.21e-16!21;UBERON:0001869!2.21e-16!21;UBERON:0000203!2.21e-16!21;UBERON:0002619!1.28e-13!17;UBERON:0002021!3.22e-12!10;UBERON:0000411!3.22e-12!10;UBERON:0001950!3.22e-12!10;UBERON:0002420!5.10e-08!8;UBERON:0007245!5.10e-08!8;UBERON:0010009!5.10e-08!8;UBERON:0010011!5.10e-08!8;UBERON:0000454!5.10e-08!8;UBERON:0003076!6.01e-08!12;UBERON:0003057!6.01e-08!12;UBERON:0004111!7.99e-08!122;UBERON:0000025!1.12e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.62e-48,54;UBERON:0001049,2.43e-44,52;UBERON:0005068,2.43e-44,52;UBERON:0006241,2.43e-44,52;UBERON:0007135,2.43e-44,52;UBERON:0002020,1.68e-40,34;UBERON:0001017,3.36e-40,73;UBERON:0001016,6.63e-39,75;UBERON:0000955,4.11e-36,47;UBERON:0006238,4.11e-36,47;UBERON:0002346,1.56e-34,64;UBERON:0003075,1.56e-34,64;UBERON:0007284,1.56e-34,64;UBERON:0002616,1.80e-34,46;UBERON:0003528,2.90e-32,29;UBERON:0002791,2.90e-32,29;UBERON:0001893,2.90e-32,29;UBERON:0010371,2.74e-29,73;UBERON:0003080,4.33e-29,40;UBERON:0004121,6.10e-29,95;UBERON:0000924,6.10e-29,95;UBERON:0006601,6.10e-29,95;UBERON:0002780,1.92e-27,39;UBERON:0001890,1.92e-27,39;UBERON:0006240,1.92e-27,39;UBERON:0002021,5.85e-23,10;UBERON:0000411,5.85e-23,10;UBERON:0001950,5.85e-23,10;UBERON:0003056,1.39e-22,49;UBERON:0000956,1.13e-21,21;UBERON:0001869,1.13e-21,21;UBERON:0000203,1.13e-21,21;UBERON:0010314,1.39e-21,92;UBERON:0002619,6.91e-21,17;UBERON:0000025,7.28e-16,114;UBERON:0003076,2.33e-15,12;UBERON:0003057,2.33e-15,12;UBERON:0004111,2.70e-14,122;UBERON:0002420,1.37e-11,8;UBERON:0007245,1.37e-11,8;UBERON:0010009,1.37e-11,8;UBERON:0010011,1.37e-11,8;UBERON:0000454,1.37e-11,8;UBERON:0002240,4.10e-11,6;UBERON:0005174,4.10e-11,6;UBERON:0001137,4.10e-11,6;UBERON:0011216,1.42e-10,194;UBERON:0001948,2.68e-09,5;UBERON:0002315,2.68e-09,5;UBERON:0000483,2.49e-08,174;UBERON:0002950,2.54e-08,4;UBERON:0001891,2.54e-08,4;UBERON:0009616,2.54e-08,4;UBERON:0010286,2.54e-08,4;UBERON:0000119,3.83e-08,176;UBERON:0004684,2.54e-07,3;UBERON:0002275,2.54e-07,3;UBERON:0000369,9.77e-07,5;UBERON:0002435,9.77e-07,5;UBERON:0000204,9.77e-07,5;UBERON:0010082,9.77e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.414758449233911,1.21505344498522,0.210324961351382,1.42825492201902,1.98781686856452,0.734944795289724,0.670918297127655,2.75765635983006,4.40463523997555,3.44755812830007,3.84016333140609,1.31886287730194,1.82975287204819,2.08365348222704,3.35019598801657,1.12552522006336,2.59757021220577,1.17851434189467,1.42371680799103,1.3047961207771,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,5.27005434620785,5.86450779077674,0,0,0,0,2.84602214869163,0.457500602818626,5.02617408451458,5.21472960576829,5.62574006126727,2.90903262383384,4.70499662896497,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,1.74937841044784,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063236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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231605 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=G3X942 | |||
|association_with_transcript=30bp_to_ENSMUST00000040001,NM_198306,uc008yqz.2_5end | |||
|cluster_id=chr5:110973394..110973419,+ | |||
|description=CAGE_peak_2_at_Galnt9_5end | |||
|id=chr5:110973394..110973419,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.19e-19!23;CL:0000337!2.19e-19!23;CL:0000540!2.91e-12!33;CL:0000047!2.91e-12!33;CL:0000031!2.91e-12!33;CL:0000404!2.91e-12!33;CL:0000221!2.03e-10!44;CL:0000133!2.03e-10!44;CL:0002319!6.04e-10!43;CL:0000393!3.54e-09!39;CL:0000211!3.54e-09!39;CL:0000055!1.99e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.48e-21,23;CL:0000337,4.48e-21,23;CL:0000540,1.75e-13,33;CL:0000047,1.75e-13,33;CL:0000031,1.75e-13,33;CL:0000404,1.75e-13,33;CL:0000393,8.19e-11,39;CL:0000211,8.19e-11,39;CL:0002319,1.87e-09,43;CL:0000221,3.73e-09,44;CL:0000133,3.73e-09,44;CL:0002610,2.54e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.75e-35!52;UBERON:0005068!1.75e-35!52;UBERON:0006241!1.75e-35!52;UBERON:0007135!1.75e-35!52;UBERON:0000073!2.52e-34!75;UBERON:0001016!2.52e-34!75;UBERON:0000955!4.54e-34!50;UBERON:0006238!4.54e-34!50;UBERON:0001017!2.46e-33!73;UBERON:0005743!2.46e-33!73;UBERON:0002616!4.12e-33!49;UBERON:0000033!2.51e-31!63;UBERON:0003080!9.69e-28!40;UBERON:0002020!1.52e-27!34;UBERON:0002346!7.82e-27!71;UBERON:0003075!7.82e-27!71;UBERON:0007284!7.82e-27!71;UBERON:0002780!9.06e-27!39;UBERON:0001890!9.06e-27!39;UBERON:0006240!9.06e-27!39;UBERON:0004121!1.45e-25!102;UBERON:0000924!1.45e-25!102;UBERON:0006601!1.45e-25!102;UBERON:0003056!3.95e-25!49;UBERON:0002791!2.83e-23!29;UBERON:0003528!2.83e-23!29;UBERON:0001893!2.83e-23!29;UBERON:0007811!3.64e-20!86;UBERON:0000153!1.14e-18!94;UBERON:0000956!2.21e-16!21;UBERON:0001869!2.21e-16!21;UBERON:0000203!2.21e-16!21;UBERON:0002619!1.28e-13!17;UBERON:0002021!3.22e-12!10;UBERON:0000411!3.22e-12!10;UBERON:0001950!3.22e-12!10;UBERON:0002420!5.10e-08!8;UBERON:0007245!5.10e-08!8;UBERON:0010009!5.10e-08!8;UBERON:0010011!5.10e-08!8;UBERON:0000454!5.10e-08!8;UBERON:0003076!6.01e-08!12;UBERON:0003057!6.01e-08!12;UBERON:0004111!7.99e-08!122;UBERON:0000025!1.12e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.62e-48,54;UBERON:0001049,2.43e-44,52;UBERON:0005068,2.43e-44,52;UBERON:0006241,2.43e-44,52;UBERON:0007135,2.43e-44,52;UBERON:0002020,1.68e-40,34;UBERON:0001017,3.36e-40,73;UBERON:0001016,6.63e-39,75;UBERON:0000955,4.11e-36,47;UBERON:0006238,4.11e-36,47;UBERON:0002346,1.56e-34,64;UBERON:0003075,1.56e-34,64;UBERON:0007284,1.56e-34,64;UBERON:0002616,1.80e-34,46;UBERON:0003528,2.90e-32,29;UBERON:0002791,2.90e-32,29;UBERON:0001893,2.90e-32,29;UBERON:0010371,2.74e-29,73;UBERON:0003080,4.33e-29,40;UBERON:0004121,6.10e-29,95;UBERON:0000924,6.10e-29,95;UBERON:0006601,6.10e-29,95;UBERON:0002780,1.92e-27,39;UBERON:0001890,1.92e-27,39;UBERON:0006240,1.92e-27,39;UBERON:0002021,5.85e-23,10;UBERON:0000411,5.85e-23,10;UBERON:0001950,5.85e-23,10;UBERON:0003056,1.39e-22,49;UBERON:0000956,1.13e-21,21;UBERON:0001869,1.13e-21,21;UBERON:0000203,1.13e-21,21;UBERON:0010314,1.39e-21,92;UBERON:0002619,6.91e-21,17;UBERON:0000025,7.28e-16,114;UBERON:0003076,2.33e-15,12;UBERON:0003057,2.33e-15,12;UBERON:0004111,2.70e-14,122;UBERON:0002420,1.37e-11,8;UBERON:0007245,1.37e-11,8;UBERON:0010009,1.37e-11,8;UBERON:0010011,1.37e-11,8;UBERON:0000454,1.37e-11,8;UBERON:0002240,4.10e-11,6;UBERON:0005174,4.10e-11,6;UBERON:0001137,4.10e-11,6;UBERON:0011216,1.42e-10,194;UBERON:0001948,2.68e-09,5;UBERON:0002315,2.68e-09,5;UBERON:0000483,2.49e-08,174;UBERON:0002950,2.54e-08,4;UBERON:0001891,2.54e-08,4;UBERON:0009616,2.54e-08,4;UBERON:0010286,2.54e-08,4;UBERON:0000119,3.83e-08,176;UBERON:0004684,2.54e-07,3;UBERON:0002275,2.54e-07,3;UBERON:0000369,9.77e-07,5;UBERON:0002435,9.77e-07,5;UBERON:0000204,9.77e-07,5;UBERON:0010082,9.77e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.414758449233911,1.21505344498522,0.210324961351382,1.42825492201902,1.98781686856452,0.734944795289724,0.670918297127655,2.75765635983006,4.40463523997555,3.44755812830007,3.84016333140609,1.31886287730194,1.82975287204819,2.08365348222704,3.35019598801657,1.12552522006336,2.59757021220577,1.17851434189467,1.42371680799103,1.3047961207771,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,5.27005434620785,5.86450779077674,0,0,0,0,2.84602214869163,0.457500602818626,5.02617408451458,5.21472960576829,5.62574006126727,2.90903262383384,4.70499662896497,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,1.74937841044784,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0.220528398054962,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,5.64751842617067,5.52390283808612,5.72895513439397,10.1393377582776,5.48066015816514,3.7769694869485,4.05013500139084,7.65546045481175,7.70342095273148,6.21312374102184,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.459483751644906,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0.561142271657738,0.474540072496697,0.29551344712669,0,0.154936841185966,0,1.24905288968973,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@Galnt9 | |||
}} |
Latest revision as of 15:11, 1 October 2015
Short description: | p2@Galnt9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Galnt9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 30bp_to_ENSMUST00000040001, NM_198306, uc008yqz.2_5end |
EntrezGene: | Galnt9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.48e-21 | 23 |
neuroblast (sensu Vertebrata) | 4.48e-21 | 23 |
neuron | 1.75e-13 | 33 |
neuronal stem cell | 1.75e-13 | 33 |
neuroblast | 1.75e-13 | 33 |
electrically signaling cell | 1.75e-13 | 33 |
electrically responsive cell | 8.19e-11 | 39 |
electrically active cell | 8.19e-11 | 39 |
neural cell | 1.87e-09 | 43 |
ectodermal cell | 3.73e-09 | 44 |
neurectodermal cell | 3.73e-09 | 44 |
raphe nuclei neuron | 2.54e-07 | 3 |