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FFCP PHASE1:Mm9::chr4:140257425..140257436,+: Difference between revisions

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{{FFCP|EntrezGene=108911|HGNC=|MCL_coexpression_id=3464|UniProt=Q8BK67|association_with_transcript=-20bp_to_ENSMUST00000038893_5end|description=CAGE_peak_4_at_Rcc2_5end|id=chr4:140257425..140257436,+|ontology_enrichment_celltype=CL:0000988!8.80e-12!32;CL:0002032!8.80e-12!32;CL:0000037!8.80e-12!32;CL:0000566!8.80e-12!32;CL:0000837!8.80e-12!32;CL:0002031!3.81e-08!25;CL:0000034!4.14e-08!97;CL:0002320!1.45e-07!46;CL:0000134!1.45e-07!46;CL:0000723!2.09e-07!91;CL:0000048!2.09e-07!91;CL:0000542!7.60e-07!13;CL:0000051!7.60e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,6.66e-12,32;CL:0002032,6.66e-12,32;CL:0000037,6.66e-12,32;CL:0000837,6.66e-12,32;CL:0000034,2.57e-08,97;CL:0002031,3.00e-08,25;CL:0002320,1.11e-07,46;CL:0000134,1.11e-07,46;CL:0000723,1.32e-07,91;CL:0000048,1.32e-07,91;CL:0000542,7.40e-07,13;CL:0000051,7.40e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.02e-12!45;UBERON:0003061!2.02e-12!45;UBERON:0002193!1.53e-10!48;UBERON:0004177!2.48e-09!29;UBERON:0000072!6.93e-08!27;UBERON:0002384!1.45e-07!46;UBERON:0002370!3.52e-07!23;UBERON:0000974!3.52e-07!23;UBERON:0004807!3.52e-07!23;UBERON:0005058!3.52e-07!23;UBERON:0003351!3.52e-07!23;UBERON:0009113!3.52e-07!23;UBERON:0003295!3.52e-07!23;UBERON:0009722!3.52e-07!23;UBERON:0005562!3.52e-07!23;UBERON:0007690!3.52e-07!23;UBERON:0006562!9.98e-07!24;UBERON:0001557!9.98e-07!24;UBERON:0001042!9.98e-07!24;UBERON:0008814!9.98e-07!24;UBERON:0009145!9.98e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-12,45;UBERON:0003061,1.05e-12,45;UBERON:0002193,7.71e-11,48;UBERON:0002405,7.71e-11,48;UBERON:0004177,1.58e-09,29;UBERON:0005057,1.58e-09,29;UBERON:0000072,4.55e-08,27;UBERON:0002384,1.11e-07,46;UBERON:0000077,1.55e-07,35;UBERON:0002370,2.30e-07,23;UBERON:0000974,2.30e-07,23;UBERON:0004807,2.30e-07,23;UBERON:0005058,2.30e-07,23;UBERON:0003351,2.30e-07,23;UBERON:0009113,2.30e-07,23;UBERON:0003295,2.30e-07,23;UBERON:0009722,2.30e-07,23;UBERON:0005562,2.30e-07,23;UBERON:0007690,2.30e-07,23;UBERON:0000153,5.71e-07,43;UBERON:0006562,6.68e-07,24;UBERON:0001557,6.68e-07,24;UBERON:0001042,6.68e-07,24;UBERON:0008814,6.68e-07,24;UBERON:0009145,6.68e-07,24|phase1_expression=4.00372117761985,0.348975407639361,0,0.60492842261366,0,1.00727563147134,1.86890112476421,4.00282302668886,7.03943610758334,4.68129052643987,8.04724450659873,7.0199499915896,5.13602189793617,3.93391810885488,4.99664642723494,4.656931149966,6.99561878128147,5.0473946457318,2.87940310572051,3.81950686618227,1.53077922271926,7.64540324246817,5.22399578277871,0.319984845586813,1.83527424853736,0.57423196411502,1.29228598847722,0.646413698057667,2.47030445293286,2.52030129759931,1.55211357458713,6.35030673459631,10.4561013889377,15.8481681015439,2.3108129580102,4.98703936075477,3.06254034393554,0,0.7813353445238,0,0.588231488031014,2.04913645487534,0.485510353031154,1.38486499773135,1.52065396829272,2.0190142737785,0.782391344348039,2.8343270329458,1.75748946187577,1.74986909166855,2.37976916763116,2.87505128729943,4.86569557567435,7.97898356212479,5.37750078627942,2.57259436035947,3.72493471920384,3.09403255366465,4.04632921719196,5.81890077199236,4.43681982454325,4.74382344896785,1.77858959222228,4.04954872776629,5.93319817540185,8.5257613793532,3.29560121570245,4.99483796918021,6.42875596312561,6.21027316325777,8.83364837675805,0.285650984403804,1.98781686856452,7.4719387521122,6.90087391331302,1.83843757322004,3.30347642998166,2.17068474744819,2.30409799884365,3.56092976871523,3.56801810049398,4.68822033501084,3.07101298901519,1.68828783009504,1.22238598221448,1.17851434189467,2.84743361598206,1.67759501242771,1.21161909333094,0.906858721281426,1.44932244350839,0,0.679971333707751,1.61910957491345,0.649776417447669,1.34408066129201,0.842666520790511,2.72688516124892,1.55871602761721,1.7666978725517,3.52108549441701,1.28326477414318,0,0,5.41227602528035,4.05375784760158,7.58286667522175,1.25602267690966,1.55362730188303,2.07818994690755,4.3371331691534,3.04465478312141,1.15307748628029,3.46662073271032,1.99900802130698,3.26733137457156,0.247194967734374,0.578397427679647,0,2.58826959915855,2.65009822152472,2.42437626567611,1.86391761218122,3.51336956413857,1.04723353406728,1.78819938646014,10.0644704584973,7.7987355029143,9.40319680340679,1.04853447583376,0.457500602818626,3.14135880282161,1.56441888173049,1.27857728665165,2.0778804455956,1.94689515681309,2.64782346010822,3.35898820647251,2.0217820674694,1.68353484709179,3.6433724029557,5.0578462975364,3.06105620669094,1.9591626318643,2.4493139694478,3.45907044769094,4.96619140166563,1.03481348295606,8.83828771024653,4.16033376369202,5.27853372491847,3.94552318369635,1.94633074457919,2.43776516565517,3.08673204611915,4.37875387000685,9.83098462238529,4.11756651383544,8.24074148247219,2.27838349789052,3.28336483973535,1.44049649168812,2.13070262026689,0.983821158737019,1.54267112887378,0.697601834251224,1.87791380979733,1.5179494507732,1.15191894939436,0.492502392237286,0.89175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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108911
|HGNC=
|MCL_coexpression_id=3464
|TSSclassifier=NA
|UniProt=Q8BK67
|association_with_transcript=-20bp_to_ENSMUST00000038893_5end
|cluster_id=chr4:140257425..140257436,+
|description=CAGE_peak_4_at_Rcc2_5end
|id=chr4:140257425..140257436,+
|ontology_enrichment_celltype=CL:0000988!8.80e-12!32;CL:0002032!8.80e-12!32;CL:0000037!8.80e-12!32;CL:0000566!8.80e-12!32;CL:0000837!8.80e-12!32;CL:0002031!3.81e-08!25;CL:0000034!4.14e-08!97;CL:0002320!1.45e-07!46;CL:0000134!1.45e-07!46;CL:0000723!2.09e-07!91;CL:0000048!2.09e-07!91;CL:0000542!7.60e-07!13;CL:0000051!7.60e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000988,6.66e-12,32;CL:0002032,6.66e-12,32;CL:0000037,6.66e-12,32;CL:0000837,6.66e-12,32;CL:0000034,2.57e-08,97;CL:0002031,3.00e-08,25;CL:0002320,1.11e-07,46;CL:0000134,1.11e-07,46;CL:0000723,1.32e-07,91;CL:0000048,1.32e-07,91;CL:0000542,7.40e-07,13;CL:0000051,7.40e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!2.02e-12!45;UBERON:0003061!2.02e-12!45;UBERON:0002193!1.53e-10!48;UBERON:0004177!2.48e-09!29;UBERON:0000072!6.93e-08!27;UBERON:0002384!1.45e-07!46;UBERON:0002370!3.52e-07!23;UBERON:0000974!3.52e-07!23;UBERON:0004807!3.52e-07!23;UBERON:0005058!3.52e-07!23;UBERON:0003351!3.52e-07!23;UBERON:0009113!3.52e-07!23;UBERON:0003295!3.52e-07!23;UBERON:0009722!3.52e-07!23;UBERON:0005562!3.52e-07!23;UBERON:0007690!3.52e-07!23;UBERON:0006562!9.98e-07!24;UBERON:0001557!9.98e-07!24;UBERON:0001042!9.98e-07!24;UBERON:0008814!9.98e-07!24;UBERON:0009145!9.98e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-12,45;UBERON:0003061,1.05e-12,45;UBERON:0002193,7.71e-11,48;UBERON:0002405,7.71e-11,48;UBERON:0004177,1.58e-09,29;UBERON:0005057,1.58e-09,29;UBERON:0000072,4.55e-08,27;UBERON:0002384,1.11e-07,46;UBERON:0000077,1.55e-07,35;UBERON:0002370,2.30e-07,23;UBERON:0000974,2.30e-07,23;UBERON:0004807,2.30e-07,23;UBERON:0005058,2.30e-07,23;UBERON:0003351,2.30e-07,23;UBERON:0009113,2.30e-07,23;UBERON:0003295,2.30e-07,23;UBERON:0009722,2.30e-07,23;UBERON:0005562,2.30e-07,23;UBERON:0007690,2.30e-07,23;UBERON:0000153,5.71e-07,43;UBERON:0006562,6.68e-07,24;UBERON:0001557,6.68e-07,24;UBERON:0001042,6.68e-07,24;UBERON:0008814,6.68e-07,24;UBERON:0009145,6.68e-07,24
|phase1_expression=4.00372117761985,0.348975407639361,0,0.60492842261366,0,1.00727563147134,1.86890112476421,4.00282302668886,7.03943610758334,4.68129052643987,8.04724450659873,7.0199499915896,5.13602189793617,3.93391810885488,4.99664642723494,4.656931149966,6.99561878128147,5.0473946457318,2.87940310572051,3.81950686618227,1.53077922271926,7.64540324246817,5.22399578277871,0.319984845586813,1.83527424853736,0.57423196411502,1.29228598847722,0.646413698057667,2.47030445293286,2.52030129759931,1.55211357458713,6.35030673459631,10.4561013889377,15.8481681015439,2.3108129580102,4.98703936075477,3.06254034393554,0,0.7813353445238,0,0.588231488031014,2.04913645487534,0.485510353031154,1.38486499773135,1.52065396829272,2.0190142737785,0.782391344348039,2.8343270329458,1.75748946187577,1.74986909166855,2.37976916763116,2.87505128729943,4.86569557567435,7.97898356212479,5.37750078627942,2.57259436035947,3.72493471920384,3.09403255366465,4.04632921719196,5.81890077199236,4.43681982454325,4.74382344896785,1.77858959222228,4.04954872776629,5.93319817540185,8.5257613793532,3.29560121570245,4.99483796918021,6.42875596312561,6.21027316325777,8.83364837675805,0.285650984403804,1.98781686856452,7.4719387521122,6.90087391331302,1.83843757322004,3.30347642998166,2.17068474744819,2.30409799884365,3.56092976871523,3.56801810049398,4.68822033501084,3.07101298901519,1.68828783009504,1.22238598221448,1.17851434189467,2.84743361598206,1.67759501242771,1.21161909333094,0.906858721281426,1.44932244350839,0,0.679971333707751,1.61910957491345,0.649776417447669,1.34408066129201,0.842666520790511,2.72688516124892,1.55871602761721,1.7666978725517,3.52108549441701,1.28326477414318,0,0,5.41227602528035,4.05375784760158,7.58286667522175,1.25602267690966,1.55362730188303,2.07818994690755,4.3371331691534,3.04465478312141,1.15307748628029,3.46662073271032,1.99900802130698,3.26733137457156,0.247194967734374,0.578397427679647,0,2.58826959915855,2.65009822152472,2.42437626567611,1.86391761218122,3.51336956413857,1.04723353406728,1.78819938646014,10.0644704584973,7.7987355029143,9.40319680340679,1.04853447583376,0.457500602818626,3.14135880282161,1.56441888173049,1.27857728665165,2.0778804455956,1.94689515681309,2.64782346010822,3.35898820647251,2.0217820674694,1.68353484709179,3.6433724029557,5.0578462975364,3.06105620669094,1.9591626318643,2.4493139694478,3.45907044769094,4.96619140166563,1.03481348295606,8.83828771024653,4.16033376369202,5.27853372491847,3.94552318369635,1.94633074457919,2.43776516565517,3.08673204611915,4.37875387000685,9.83098462238529,4.11756651383544,8.24074148247219,2.27838349789052,3.28336483973535,1.44049649168812,2.13070262026689,0.983821158737019,1.54267112887378,0.697601834251224,1.87791380979733,1.5179494507732,1.15191894939436,0.492502392237286,0.891756905004413,0.584799949701329,1.09775057645525,0.671032093801859,1.89260953707715,3.91037527041281,0.991256348951394,1.58670339998127,4.69234151177515,3.71578674976702,2.57734922644187,1.61346819698674,2.2237804384487,2.09248188723815,1.42358718463353,0.823494773620054,1.50801125280162,1.98956472041151,0.974820435595601,4.49409704327111,1.72910439899755,0.398282546508734,4.93136542478012,3.88444942873078,0,3.66572390121566,2.32742984601151,2.52488951605147,1.96033265085198,0.738050739898011,0.470996183524124,0.863780147452604,0.889357881261447,7.50802975722423,4.12773889737726,5.62155280962134,4.66578279193557,4.3411888755435,3.05551022137704,2.5892652370573,1.62135226775035,3.0201755450689,1.43768206527355,1.11642284300551,1.24815069245824,1.01031551178845,1.25578189465339,0.964887042726734,2.21703828199926,4.16881105895066,4.4000543639347,3.90413697282933,3.28566347603903,2.1775813467436,2.38043640886014,1.75620283072019,2.52216230569906,1.55025282754142,3.02964060449226,1.47476983244164,2.07221978239075,2.16973587872267,0,1.08781136763742,0.491764273019036,3.03530420935206,2.72936002979246,1.99259867206745,5.24591825205361,0.757412781613119,4.10160685241134,3.12350995437311,3.44677436372478,4.30143836314594,2.45078541490634,2.54768877709949,2.42886421004937,2.92255857911312,2.37172666767914,0.963963949265421,2.6968616189571,2.67098405500883,1.62886959353576,1.97964147567043,2.65490276679926,5.09839335925461,2.72091201268276,1.50884063804718,2.95301892880773,1.22974059177571,2.84271122485043,1.09060118843252,1.78248689192361,2.52829406348653,3.16255825724996,3.09406629744561,3.06395645178409,4.50152735078276,4.65691261617916,5.5727629108214,3.54680467284547,3.21063871683727,2.13913726782757,3.65357938937519,1.17335854031855,2.1183207086382,2.64634077665954,1.48397627647332,2.58343082713449,2.77439454669517,3.46179797609096,3.44695889464629,2.04036585640896,2.41052892613663,4.27177201994632,4.74689796315412,5.37064129372164,6.78126445216888,5.05768642567793,4.34678529092393,5.94924504978494,6.43776680688827,7.18639863783004,0.954670618015114,3.95419991976419,2.64315307264903,2.05210147561422,2.92723614420256,1.9652630737156,2.29269388854195,1.98368293740806,1.57053565190418,1.94422459937689,0,2.25477175473676,5.83114529571517,2.81279433777066,3.11121901350476,5.03723311563151,4.56181538825101,2.58185925020659,2.3436789271911,3.46035836604846,1.69108884578204,1.72818003754719,4.4241556887945,4.45995473638361,7.70332178736204,6.75588279484534,7.6981479137017,6.35780335300048,6.73094517311826,5.90758108698309,6.96668504642219,7.23964663222498,5.94874492307359,4.97035191772737,6.73482891482306,4.79195298944433,1.81384306892169,1.77588762699252,2.51198798506532,1.84673078000486,1.73870634628971,1.12609485270709,3.29672923681077,3.85863082342319,3.51100472824754,1.12950368523413,0.920650473014354,1.14579102687879,1.20297227640581,2.05524755931193,1.5107877947794,1.35004500046361,0.45032120322422,2.26571204492102,1.55328093525546,6.43481555021895,2.39414924040619,4.78054096111576,3.40349403895612,4.19226325255965,2.38996560985018,1.55572709461131,2.47242068686673,0.962757628775446,2.77966932940177,1.01391719956096,1.13175804831646,1.68554713445788,1.98477972455095,2.1825478203133,0.952587382566147,1.62238056322798,1.35036454324594,2.06042950401653,1.32479028120958,2.40008476669791,1.06485483695602,1.90748951957857,2.90692833264657,2.72917203204459,1.69229215783353,2.92684756596436,1.8414879800649,1.90125759384206,1.68342681497322,1.77952527186261,2.1670986122624,1.22769312950907,1.85924209423159,2.12197272079256,4.49659040288303,1.63752125911786,1.71896843238639,1.3390183244819,3.52946270591225,1.15933917810211
|short_description=p4@Rcc2
}}

Latest revision as of 15:03, 26 September 2015

Short description:p4@Rcc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rcc2_5end
Coexpression cluster:MCL_coexpression_mm9:3464
Association with transcript: -20bp_to_ENSMUST00000038893_5end
EntrezGene:Rcc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rcc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.02
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.40
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E28.84
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.19
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I27.70
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C17.70
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C75.91
thymus, neonate N06.CNhs11197.681-26C46.97
thymus, neonate N07.CNhs11211.713-19D37.24
thymus, neonate N10.CNhs11194.748-24E45.95
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G76.73
thymus, neonate N30.CNhs11132.1393-42G24.79
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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