FFCP PHASE1:Mm9::chr4:135429461..135429521,-: Difference between revisions
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{{FFCP|EntrezGene=52830|HGNC=|MCL_coexpression_id=177|UniProt=Q9CR73|association_with_transcript=0bp_to_ENSMUST00000142585_5end|description=CAGE_peak_2_at_Pnrc2_5end|id=chr4:135429461..135429521,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.38e-10!130;UBERON:0000925!7.38e-10!130;UBERON:0006595!7.38e-10!130;UBERON:0001007!1.47e-09!128;UBERON:0001555!1.47e-09!128;UBERON:0007026!1.47e-09!128;UBERON:0004921!9.17e-09!126;UBERON:0004185!9.17e-09!126;UBERON:0005409!4.99e-08!59;UBERON:0004923!1.14e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.94e-11,118;UBERON:0000925,1.94e-11,118;UBERON:0006595,1.94e-11,118;UBERON:0001007,4.01e-11,116;UBERON:0001555,4.01e-11,116;UBERON:0007026,4.01e-11,116;UBERON:0005409,2.42e-10,47;UBERON:0004921,2.99e-10,114;UBERON:0004923,1.02e-07,24;UBERON:0000160,2.41e-07,31|phase1_expression=1.92178616525753,5.58360652222978,5.45999087267443,3.62957053568196,1.50268718983904,6.71517087647559,6.77476657727024,6.71441281896197,2.39340827657833,1.63845168425395,0.171217968225505,0.478632953972018,4.79362043807376,5.42006494997784,7.99463428357591,6.47920855647443,1.39912375625629,32.3348719492194,38.1178125423954,27.585327366872,2.72138528483423,7.64540324246817,6.79119451761232,8.47959840805055,7.57050627521661,3.44539178469012,9.47676391549965,8.40337807474967,4.94060890586572,3.02436155711917,5.32153225572731,0.635030673459631,0.61506478758457,15.8481681015439,3.46621943701529,4.15586613396231,4.69589519403449,23.0192396905299,19.533383613095,16.2292360631877,31.7645003536748,19.8083190637949,31.0726625939938,0.629484089877886,1.21652317463417,0.734187008646726,0,0.65407546914134,1.5378032791413,1.36100929351998,2.09979632438044,0,20.1339127269284,2.90144856804538,4.36921938885203,1.28629718017973,2.29226751951005,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,4.04954872776629,2.96659908770092,0.7104801149461,0.599200221036809,0.384218305321555,0,0.675029691658453,0.630974884054146,0,0.441737081903227,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,1.27687338085188,1.22885226604995,0.659431438650969,0.548925861614458,0,1.11673199600552,1.68828783009504,2.13917546887534,0.883885756421003,0.711858403995515,0.372798891650601,0.605809546665472,3.09843396437821,4.92769630792852,8.60423876981386,0,5.93673510801599,2.59910566979068,5.82434953226536,4.49422144421606,1.87473354835864,1.55871602761721,1.06001872353102,1.12674735821344,0,0,0,1.08245520505607,1.77351905832569,0.505524445014783,6.05174562511018,21.4918443427153,4.89859058913922,1.21439728736295,1.52232739156071,2.30615497256059,4.37095657602605,2.11659672844269,5.40366342717605,6.42706916109372,8.82056077211461,4.42305275974937,1.61766849947409,6.40440403535141,5.33362778448744,5.59175283654366,1.17112318804619,1.25668024088073,6.13096932500619,3.11519323715393,4.79922184794726,3.93917703926501,1.49790639404823,0.457500602818626,0.628271760564322,1.21677024134594,0.767146371990992,1.66230435647648,2.10913641988085,1.73126918545538,6.84238338355512,12.1306924048164,2.10441855886474,1.30120442962704,2.06911893990126,0.720248519221397,0.60281927134286,0.408218994907967,0.384341160854549,0.562210347358373,2.58703370739016,1.29340795759705,0.945530400839096,0.351902248327898,1.09597866213787,1.11218899690239,0.348252166522167,3.08673204611915,1.99034266818493,7.02213187313235,5.1469581422943,7.672414483681,3.31401236056803,1.87620847984877,2.34080679899319,2.60419209143731,2.16440654922144,3.39387648352232,3.72054311600653,2.14618721119695,2.6856028744449,2.30383789878873,4.76085645829376,2.67527071501324,4.5321996101853,3.73235195994786,3.62357330653004,2.10289948564127,0.92614151141356,6.27795687669216,3.43785736662608,1.91959425481711,1.16118335930219,2.06187938115349,3.22693639397348,5.33707305227689,6.65789691393957,5.21981967698963,5.76446341534038,6.03204501120647,6.16765063327568,5.26403035221624,2.69645822596266,6.70027954611552,7.36822711041159,1.32767530667157,2.17072173958485,1.1270773567308,1.62921062276251,1.93952487167626,1.82353131714828,2.65593455921881,3.09981310757165,4.86696056308262,4.81248939295022,4.44678940630723,0.83422552858047,3.34150291692445,1.57403478669398,1.62288097110802,2.17059443777175,2.5462585178142,1.72617682470486,1.29708181420028,0.549122826376163,4.31304619582064,3.72140947668503,4.68056509671841,4.04126204715379,4.12614051100398,6.75420929908714,6.65111484599777,1.89491411770485,1.30371981153621,1.52770577197669,2.58159273117352,3.35012514883632,3.57065461329021,2.92700471786698,4.72905432318573,3.32197034473162,4.78364305972461,7.86543910635542,6.04397436530635,5.64131328467895,4.52373851817817,8.15858525728064,2.95058563811422,4.41498794087572,2.72936002979246,2.22702204525186,0.491804836130026,1.76729649043061,1.26203287766503,0.390438744296638,1.29254038639679,0.955875191810208,3.11918143715352,0.283076530788832,0.404810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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52830 | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CR73 | |||
|association_with_transcript=0bp_to_ENSMUST00000142585_5end | |||
|cluster_id=chr4:135429461..135429521,- | |||
|description=CAGE_peak_2_at_Pnrc2_5end | |||
|id=chr4:135429461..135429521,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.38e-10!130;UBERON:0000925!7.38e-10!130;UBERON:0006595!7.38e-10!130;UBERON:0001007!1.47e-09!128;UBERON:0001555!1.47e-09!128;UBERON:0007026!1.47e-09!128;UBERON:0004921!9.17e-09!126;UBERON:0004185!9.17e-09!126;UBERON:0005409!4.99e-08!59;UBERON:0004923!1.14e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.94e-11,118;UBERON:0000925,1.94e-11,118;UBERON:0006595,1.94e-11,118;UBERON:0001007,4.01e-11,116;UBERON:0001555,4.01e-11,116;UBERON:0007026,4.01e-11,116;UBERON:0005409,2.42e-10,47;UBERON:0004921,2.99e-10,114;UBERON:0004923,1.02e-07,24;UBERON:0000160,2.41e-07,31 | |||
|phase1_expression=1.92178616525753,5.58360652222978,5.45999087267443,3.62957053568196,1.50268718983904,6.71517087647559,6.77476657727024,6.71441281896197,2.39340827657833,1.63845168425395,0.171217968225505,0.478632953972018,4.79362043807376,5.42006494997784,7.99463428357591,6.47920855647443,1.39912375625629,32.3348719492194,38.1178125423954,27.585327366872,2.72138528483423,7.64540324246817,6.79119451761232,8.47959840805055,7.57050627521661,3.44539178469012,9.47676391549965,8.40337807474967,4.94060890586572,3.02436155711917,5.32153225572731,0.635030673459631,0.61506478758457,15.8481681015439,3.46621943701529,4.15586613396231,4.69589519403449,23.0192396905299,19.533383613095,16.2292360631877,31.7645003536748,19.8083190637949,31.0726625939938,0.629484089877886,1.21652317463417,0.734187008646726,0,0.65407546914134,1.5378032791413,1.36100929351998,2.09979632438044,0,20.1339127269284,2.90144856804538,4.36921938885203,1.28629718017973,2.29226751951005,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,4.04954872776629,2.96659908770092,0.7104801149461,0.599200221036809,0.384218305321555,0,0.675029691658453,0.630974884054146,0,0.441737081903227,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,1.27687338085188,1.22885226604995,0.659431438650969,0.548925861614458,0,1.11673199600552,1.68828783009504,2.13917546887534,0.883885756421003,0.711858403995515,0.372798891650601,0.605809546665472,3.09843396437821,4.92769630792852,8.60423876981386,0,5.93673510801599,2.59910566979068,5.82434953226536,4.49422144421606,1.87473354835864,1.55871602761721,1.06001872353102,1.12674735821344,0,0,0,1.08245520505607,1.77351905832569,0.505524445014783,6.05174562511018,21.4918443427153,4.89859058913922,1.21439728736295,1.52232739156071,2.30615497256059,4.37095657602605,2.11659672844269,5.40366342717605,6.42706916109372,8.82056077211461,4.42305275974937,1.61766849947409,6.40440403535141,5.33362778448744,5.59175283654366,1.17112318804619,1.25668024088073,6.13096932500619,3.11519323715393,4.79922184794726,3.93917703926501,1.49790639404823,0.457500602818626,0.628271760564322,1.21677024134594,0.767146371990992,1.66230435647648,2.10913641988085,1.73126918545538,6.84238338355512,12.1306924048164,2.10441855886474,1.30120442962704,2.06911893990126,0.720248519221397,0.60281927134286,0.408218994907967,0.384341160854549,0.562210347358373,2.58703370739016,1.29340795759705,0.945530400839096,0.351902248327898,1.09597866213787,1.11218899690239,0.348252166522167,3.08673204611915,1.99034266818493,7.02213187313235,5.1469581422943,7.672414483681,3.31401236056803,1.87620847984877,2.34080679899319,2.60419209143731,2.16440654922144,3.39387648352232,3.72054311600653,2.14618721119695,2.6856028744449,2.30383789878873,4.76085645829376,2.67527071501324,4.5321996101853,3.73235195994786,3.62357330653004,2.10289948564127,0.92614151141356,6.27795687669216,3.43785736662608,1.91959425481711,1.16118335930219,2.06187938115349,3.22693639397348,5.33707305227689,6.65789691393957,5.21981967698963,5.76446341534038,6.03204501120647,6.16765063327568,5.26403035221624,2.69645822596266,6.70027954611552,7.36822711041159,1.32767530667157,2.17072173958485,1.1270773567308,1.62921062276251,1.93952487167626,1.82353131714828,2.65593455921881,3.09981310757165,4.86696056308262,4.81248939295022,4.44678940630723,0.83422552858047,3.34150291692445,1.57403478669398,1.62288097110802,2.17059443777175,2.5462585178142,1.72617682470486,1.29708181420028,0.549122826376163,4.31304619582064,3.72140947668503,4.68056509671841,4.04126204715379,4.12614051100398,6.75420929908714,6.65111484599777,1.89491411770485,1.30371981153621,1.52770577197669,2.58159273117352,3.35012514883632,3.57065461329021,2.92700471786698,4.72905432318573,3.32197034473162,4.78364305972461,7.86543910635542,6.04397436530635,5.64131328467895,4.52373851817817,8.15858525728064,2.95058563811422,4.41498794087572,2.72936002979246,2.22702204525186,0.491804836130026,1.76729649043061,1.26203287766503,0.390438744296638,1.29254038639679,0.955875191810208,3.11918143715352,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,2.24924921495265,3.69044221541498,1.24645922567079,1.79175655288934,5.44401405809367,1.32745138339963,0.971122544619926,2.41858845571801,2.45186603682668,0.295301892880773,1.22974059177571,2.32585463851399,3.27180356529755,3.92147116223193,2.21225730555071,3.16255825724996,2.06271086496374,5.10659408630682,2.16073312837572,1.68166288917581,1.28602221018955,1.59606210278046,1.96205699362278,3.29098041204242,1.2178597964584,2.81606049676452,4.44847348814022,6.61585194164886,1.31909002353184,1.29171541356724,1.38719727334758,2.02932984805332,1.64140899745061,5.24665505933731,1.66882771809459,9.56876932467975,2.47664241555867,4.25947412950337,7.34636982318295,8.06495943554049,14.870581258424,2.71965487990169,3.91864066506242,3.59319931891502,3.81868247206045,2.53068794864908,1.21991680276109,3.56417624711944,3.3454127362315,4.80397640241591,4.04593039154462,2.89287095038676,6.5438985496007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| |||
|short_description=p2@Pnrc2 | |||
}} |
Latest revision as of 12:44, 26 September 2015
Short description: | p2@Pnrc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pnrc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | 0bp_to_ENSMUST00000142585_5end |
EntrezGene: | Pnrc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.94e-11 | 118 |
endoderm | 1.94e-11 | 118 |
presumptive endoderm | 1.94e-11 | 118 |
digestive system | 4.01e-11 | 116 |
digestive tract | 4.01e-11 | 116 |
primitive gut | 4.01e-11 | 116 |
gastrointestinal system | 2.42e-10 | 47 |
subdivision of digestive tract | 2.99e-10 | 114 |
organ component layer | 1.02e-07 | 24 |
intestine | 2.41e-07 | 31 |