FFCP PHASE1:Mm9::chr4:126431114..126431124,+: Difference between revisions
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{{FFCP|EntrezGene=100317|HGNC=|MCL_coexpression_id=163|UniProt=|association_with_transcript=44bp_to_ENSMUST00000136035_5end|description=CAGE_peak_3_at_AU040320_5end|id=chr4:126431114..126431124,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.28e-09,6;CL:0000677,1.28e-09,6;CL:0000584,1.28e-09,6;CL:0000075,4.81e-08,7;CL:0002563,9.92e-08,9;CL:0002251,9.92e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.10e-11!43;UBERON:0005409!6.60e-09!59;UBERON:0000344!3.21e-08!15;UBERON:0001242!5.67e-07!13;UBERON:0000060!5.67e-07!13;UBERON:0001262!5.67e-07!13;UBERON:0004786!5.67e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-15,31;UBERON:0000344,1.23e-14,15;UBERON:0001242,3.76e-12,13;UBERON:0001262,3.76e-12,13;UBERON:0004786,3.76e-12,13;UBERON:0005409,7.24e-09,47;UBERON:0004923,9.91e-09,24;UBERON:0003350,9.92e-08,9;UBERON:0004808,9.92e-08,9;UBERON:0001277,9.92e-08,9|phase1_expression=0.160148847104794,7.32848356042658,10.4649825059593,8.16653370528441,9.01612313903425,5.03637815735669,5.37309073369709,0.258246646883153,0.985521055061667,0.468129052643987,0.34243593645101,0.0797721589953364,0.856003649656029,0.699363219351979,0.333109761815663,0,0,0.630924330716475,0.548457734422955,0.42438965179803,0.340173160604279,3.07801948722744,3.39559725880616,4.95976510659561,5.73523202667925,6.31655160526522,7.32295393470427,4.95583835177545,2.66032787238923,2.52030129759931,4.8780712344167,0,0,0,0.288851619751275,0.498703936075477,1.63335485009895,5.02237956884289,2.3440060335714,6.80580867165938,4.70585190424811,2.04913645487534,4.85510353031154,0.503587271902309,0.405507724878058,0,1.56478268869608,0.436050312760893,1.31811709640683,0.777719596297134,1.1198913730029,1.43752564364972,0,0,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,1.61853168687678,1.5869729378161,0.633831403506179,1.35537812827653,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0,0.311068836925433,0,0.210324961351382,0.856952953211411,0.220868540951614,0,0.191690942036473,0.919218786610021,0,0.383062014255563,0,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.702222100658759,0.681721290312231,1.03914401841148,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.79928715803342,1.8125651855302,0.148442139064825,0.693941307064543,0.304465478312141,0.461230994512117,0.60289056221049,0.352766121407114,0.251333182659351,0.988779870937496,0.722996784599558,0.884610551949874,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,0,1.27728527604296,0.958520996047362,1.79970819298022,0.635351135365324,0.599162557619291,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0.83115217823824,0.648965052271031,0.305518091550949,0.870848794270651,2.0217820674694,0,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0.431135985865684,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0.702213187313235,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0,0,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0,0.658650345873152,0.134206418760372,0.420579897128254,0.205809224758569,4.95628174475697,2.90895623329899,0.213288250535234,0.232236671860439,0.77320476793256,1.21010114774006,0.444756087689741,1.71203063501303,0.949058123089023,2.63518327558417,1.00534083520108,1.59165177632921,2.14460495831032,3.59527763461689,0.864552199498777,1.7922714592893,0.189667900953082,0,2.25415471346161,0,0.581857461502877,0.140271639780637,0.632365371242573,0.147610147979602,0.470996183524124,0.616985819609003,0,0.333690211432188,0.393117990226406,0.449724224769707,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,1.5601883655728,0,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,1.36593553500459,0.315270288212382,0.221464689648775,0.637819074629948,0.983179888294428,0.690739927463582,0.867894351489069,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,0.35163505977661,0.819674726883377,0.504941854408746,0.94652465824877,0.390438744296638,1.07711698866399,1.19484398976276,1.33679204449436,1.13230612315533,0.809621403349789,0.584511715822624,1.97643888973262,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,0,1.209294227859,1.69744571780308,2.36241514304618,0.922305443831782,2.32585463851399,0.727067458955011,0.712994756769443,0.632073515871632,3.16255825724996,1.03135543248187,1.36175842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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100317 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=44bp_to_ENSMUST00000136035_5end | |||
|cluster_id=chr4:126431114..126431124,+ | |||
|description=CAGE_peak_3_at_AU040320_5end | |||
|id=chr4:126431114..126431124,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.28e-09,6;CL:0000677,1.28e-09,6;CL:0000584,1.28e-09,6;CL:0000075,4.81e-08,7;CL:0002563,9.92e-08,9;CL:0002251,9.92e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.10e-11!43;UBERON:0005409!6.60e-09!59;UBERON:0000344!3.21e-08!15;UBERON:0001242!5.67e-07!13;UBERON:0000060!5.67e-07!13;UBERON:0001262!5.67e-07!13;UBERON:0004786!5.67e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-15,31;UBERON:0000344,1.23e-14,15;UBERON:0001242,3.76e-12,13;UBERON:0001262,3.76e-12,13;UBERON:0004786,3.76e-12,13;UBERON:0005409,7.24e-09,47;UBERON:0004923,9.91e-09,24;UBERON:0003350,9.92e-08,9;UBERON:0004808,9.92e-08,9;UBERON:0001277,9.92e-08,9 | |||
|phase1_expression=0.160148847104794,7.32848356042658,10.4649825059593,8.16653370528441,9.01612313903425,5.03637815735669,5.37309073369709,0.258246646883153,0.985521055061667,0.468129052643987,0.34243593645101,0.0797721589953364,0.856003649656029,0.699363219351979,0.333109761815663,0,0,0.630924330716475,0.548457734422955,0.42438965179803,0.340173160604279,3.07801948722744,3.39559725880616,4.95976510659561,5.73523202667925,6.31655160526522,7.32295393470427,4.95583835177545,2.66032787238923,2.52030129759931,4.8780712344167,0,0,0,0.288851619751275,0.498703936075477,1.63335485009895,5.02237956884289,2.3440060335714,6.80580867165938,4.70585190424811,2.04913645487534,4.85510353031154,0.503587271902309,0.405507724878058,0,1.56478268869608,0.436050312760893,1.31811709640683,0.777719596297134,1.1198913730029,1.43752564364972,0,0,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,1.61853168687678,1.5869729378161,0.633831403506179,1.35537812827653,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0,0.311068836925433,0,0.210324961351382,0.856952953211411,0.220868540951614,0,0.191690942036473,0.919218786610021,0,0.383062014255563,0,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.702222100658759,0.681721290312231,1.03914401841148,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.79928715803342,1.8125651855302,0.148442139064825,0.693941307064543,0.304465478312141,0.461230994512117,0.60289056221049,0.352766121407114,0.251333182659351,0.988779870937496,0.722996784599558,0.884610551949874,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,0,1.27728527604296,0.958520996047362,1.79970819298022,0.635351135365324,0.599162557619291,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0.83115217823824,0.648965052271031,0.305518091550949,0.870848794270651,2.0217820674694,0,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0.431135985865684,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0.702213187313235,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0,0,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0,0.658650345873152,0.134206418760372,0.420579897128254,0.205809224758569,4.95628174475697,2.90895623329899,0.213288250535234,0.232236671860439,0.77320476793256,1.21010114774006,0.444756087689741,1.71203063501303,0.949058123089023,2.63518327558417,1.00534083520108,1.59165177632921,2.14460495831032,3.59527763461689,0.864552199498777,1.7922714592893,0.189667900953082,0,2.25415471346161,0,0.581857461502877,0.140271639780637,0.632365371242573,0.147610147979602,0.470996183524124,0.616985819609003,0,0.333690211432188,0.393117990226406,0.449724224769707,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,1.5601883655728,0,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,1.36593553500459,0.315270288212382,0.221464689648775,0.637819074629948,0.983179888294428,0.690739927463582,0.867894351489069,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,0.35163505977661,0.819674726883377,0.504941854408746,0.94652465824877,0.390438744296638,1.07711698866399,1.19484398976276,1.33679204449436,1.13230612315533,0.809621403349789,0.584511715822624,1.97643888973262,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,0,1.209294227859,1.69744571780308,2.36241514304618,0.922305443831782,2.32585463851399,0.727067458955011,0.712994756769443,0.632073515871632,3.16255825724996,1.03135543248187,1.36175842301515,0.36012218806262,0.129358683782755,0.643011105094777,0.354680467284547,0.535106452806212,0.493647061806363,0.608929898229199,1.17335854031855,0.42366414172764,3.08739757276947,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0,2.91480836629851,0.370850604021019,0.683483523191411,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,0.679913719975421,0.979660166265606,0.690999869022119,0.954670618015114,0.474503990371703,0.813277868507395,0.324016022465404,0.836353184057875,0.218362563746178,0.539457385539283,0.495920734352016,0.26175594198403,1.03691978633434,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0.234714477291508,0.39061315453185,0.104859344425711,0.724752362478018,0.576060012515731,0.316011120628178,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,1.19208812868759,0.721172697119813,0.295379054349154,0.302899349844443,0.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| |||
|short_description=p3@AU040320 | |||
}} |
Latest revision as of 08:37, 26 September 2015
Short description: | p3@AU040320 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AU040320_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 44bp_to_ENSMUST00000136035_5end |
EntrezGene: | AU040320 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.28e-09 | 6 |
gut absorptive cell | 1.28e-09 | 6 |
enterocyte | 1.28e-09 | 6 |
columnar/cuboidal epithelial cell | 4.81e-08 | 7 |
intestinal epithelial cell | 9.92e-08 | 9 |
epithelial cell of alimentary canal | 9.92e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-15 | 31 |
mucosa | 1.23e-14 | 15 |
intestinal mucosa | 3.76e-12 | 13 |
wall of intestine | 3.76e-12 | 13 |
gastrointestinal system mucosa | 3.76e-12 | 13 |
gastrointestinal system | 7.24e-09 | 47 |
organ component layer | 9.91e-09 | 24 |
epithelium of mucosa | 9.92e-08 | 9 |
gastrointestinal system epithelium | 9.92e-08 | 9 |
intestinal epithelium | 9.92e-08 | 9 |