FFCP PHASE1:Mm9::chr3:95392913..95392931,+: Difference between revisions
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{{FFCP|EntrezGene=229593|HGNC=|MCL_coexpression_id=3433|UniProt=Q8R088|association_with_transcript=32bp_to_ENSMUST00000060323,ENSMUST00000098861_5end|description=CAGE_peak_3_at_Golph3l_5end|id=chr3:95392913..95392931,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.50e-25!59;UBERON:0000160!1.76e-20!43;UBERON:0004119!3.09e-15!130;UBERON:0000925!3.09e-15!130;UBERON:0006595!3.09e-15!130;UBERON:0001007!1.54e-14!128;UBERON:0001555!1.54e-14!128;UBERON:0007026!1.54e-14!128;UBERON:0004921!1.84e-13!126;UBERON:0004185!1.84e-13!126;UBERON:0004923!1.86e-11!24;UBERON:0000344!9.51e-10!15;UBERON:0001242!1.89e-08!13;UBERON:0000060!1.89e-08!13;UBERON:0001262!1.89e-08!13;UBERON:0004786!1.89e-08!13;UBERON:0002108!5.16e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.66e-21,47;UBERON:0000160,6.15e-17,31;UBERON:0004119,9.76e-12,118;UBERON:0000925,9.76e-12,118;UBERON:0006595,9.76e-12,118;UBERON:0004923,1.76e-11,24;UBERON:0001007,4.03e-11,116;UBERON:0001555,4.03e-11,116;UBERON:0007026,4.03e-11,116;UBERON:0004921,3.56e-10,114;UBERON:0000344,9.08e-10,15;UBERON:0001242,1.82e-08,13;UBERON:0001262,1.82e-08,13;UBERON:0004786,1.82e-08,13|phase1_expression=2.88267924788629,18.8446720125255,24.5699589270349,12.7034968748869,14.0250804384977,16.787927191189,19.3898491694286,0.903863264091034,0.140788722151667,0.468129052643987,0,0.319088635981346,1.54080656938085,1.48614684112296,2.33176833270964,5.4668322195253,5.59649502502517,2.20823515750766,1.50825876966313,1.69755860719212,3.14660173558958,4.96454756004426,7.83599367416806,30.0785754851605,28.4467508523291,16.0784949952206,27.1380057580217,21.5471232685889,49.2160656392008,23.4388020676736,27.4945833212578,1.27006134691926,1.84519436275371,0,13.8648777480612,11.9688944658114,14.9043630071529,3.76678467663217,5.4693474116666,6.28228492768558,4.70585190424811,4.78131839470912,3.88408282424923,4.78407908307194,3.24406179902447,3.12029478674859,0.782391344348039,1.30815093828268,1.31811709640683,1.55543919259427,1.1198913730029,4.31257693094915,2.18117387875057,2.17608642603403,2.35265659399725,3.08711323243136,2.57880095944881,3.6097046459421,0.606949382578793,1.05798195854407,0.633831403506179,0,0,3.1496490104849,5.93319817540185,1.4209602298922,0.599200221036809,1.15265491596466,1.34796496001021,1.35005938331691,1.89292465216244,0.285650984403804,0.662605622854841,1.10241719293459,0.862609239164127,0.919218786610021,1.10115880999389,0.510749352340751,0.153606533256243,0.791317726381163,0.914876436024097,0,0.279182999001381,1.12552522006336,1.22238598221448,1.17851434189467,0.569486723196412,1.4911955666024,1.51452386666368,2.79614772395106,8.69593466105033,3.44169550792555,0,2.69851595818909,1.29955283489534,1.34408066129201,6.17955448579708,1.1930122580464,0.779358013808606,0.35333957451034,2.95771181531029,0,0,0,4.11332977921307,3.04031838570118,4.54972000513305,7.65031994117702,10.616453229534,4.30482203287992,2.77576522825817,3.95805121805784,5.99600292865752,7.08396410597326,5.52666923537813,3.51866455723091,8.15743393523434,3.61498392299779,7.07688441559899,4.04417124868523,5.30019644304944,4.84875253135222,74.5567044872489,0.292780797011547,0.628340120440365,27.5893619625279,4.07371423320129,1.19980546198682,5.71816021828791,1.9472783122627,0.457500602818626,1.63350657746724,0.521472960576829,0.511430914660661,0.62336413367868,1.46017136760982,3.56437773476107,6.71797641294502,8.08712826987759,5.47148825304832,3.77349284591841,2.98872735763515,1.62055916824814,2.41127708537144,2.99360596265843,3.20284300712124,2.06143794031403,2.58703370739016,2.37124792226126,2.08016688184601,3.16712023495108,1.53437012699302,2.78047249225598,2.78601733217733,3.90986059175093,2.18937693500343,9.12877143507205,9.77922047035918,9.37739548005456,4.14251545071004,3.75241695969754,4.8616756594474,2.60419209143731,3.73852040320067,3.39387648352232,4.88321283975857,1.87791380979733,4.32031766758527,2.63295759861569,1.64167464079095,2.35099547682982,2.48539978623065,1.3173006917463,2.54992195644706,0.841159794256509,2.05809224758569,36.6764849112016,24.5939026997096,4.90562976231038,3.25131340604614,7.60318021800351,11.2942773789072,15.3440850252961,21.1150444984941,22.302865892592,13.5053142873689,16.5881237808178,19.2987777879916,16.9618755793635,19.7740269903929,47.1180948726833,44.4085039357239,0.569003702859245,4.79843752960861,4.50830942692322,3.05476991767971,5.04276466635827,2.87556861550306,3.73095569033118,4.72352473534727,4.86696056308262,4.44229790118482,2.07516838961004,4.83850806576673,4.91397487783007,5.8464149220062,6.6943840058206,8.20002343158217,7.38414970166117,5.4662266115654,2.10775794807546,4.11842119782122,1.43768206527355,3.34926852901653,2.80833905803104,2.27320990152401,1.97337154874103,0.482443521363367,6.83586803616437,2.08440552947533,3.09633455239849,4.07388205860452,4.22442446919304,5.3602002381381,6.42717830392237,5.46374214001837,5.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229593 | |||
|HGNC= | |||
|MCL_coexpression_id=3433 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R088 | |||
|association_with_transcript=32bp_to_ENSMUST00000060323,ENSMUST00000098861_5end | |||
|cluster_id=chr3:95392913..95392931,+ | |||
|description=CAGE_peak_3_at_Golph3l_5end | |||
|id=chr3:95392913..95392931,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.50e-25!59;UBERON:0000160!1.76e-20!43;UBERON:0004119!3.09e-15!130;UBERON:0000925!3.09e-15!130;UBERON:0006595!3.09e-15!130;UBERON:0001007!1.54e-14!128;UBERON:0001555!1.54e-14!128;UBERON:0007026!1.54e-14!128;UBERON:0004921!1.84e-13!126;UBERON:0004185!1.84e-13!126;UBERON:0004923!1.86e-11!24;UBERON:0000344!9.51e-10!15;UBERON:0001242!1.89e-08!13;UBERON:0000060!1.89e-08!13;UBERON:0001262!1.89e-08!13;UBERON:0004786!1.89e-08!13;UBERON:0002108!5.16e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.66e-21,47;UBERON:0000160,6.15e-17,31;UBERON:0004119,9.76e-12,118;UBERON:0000925,9.76e-12,118;UBERON:0006595,9.76e-12,118;UBERON:0004923,1.76e-11,24;UBERON:0001007,4.03e-11,116;UBERON:0001555,4.03e-11,116;UBERON:0007026,4.03e-11,116;UBERON:0004921,3.56e-10,114;UBERON:0000344,9.08e-10,15;UBERON:0001242,1.82e-08,13;UBERON:0001262,1.82e-08,13;UBERON:0004786,1.82e-08,13 | |||
|phase1_expression=2.88267924788629,18.8446720125255,24.5699589270349,12.7034968748869,14.0250804384977,16.787927191189,19.3898491694286,0.903863264091034,0.140788722151667,0.468129052643987,0,0.319088635981346,1.54080656938085,1.48614684112296,2.33176833270964,5.4668322195253,5.59649502502517,2.20823515750766,1.50825876966313,1.69755860719212,3.14660173558958,4.96454756004426,7.83599367416806,30.0785754851605,28.4467508523291,16.0784949952206,27.1380057580217,21.5471232685889,49.2160656392008,23.4388020676736,27.4945833212578,1.27006134691926,1.84519436275371,0,13.8648777480612,11.9688944658114,14.9043630071529,3.76678467663217,5.4693474116666,6.28228492768558,4.70585190424811,4.78131839470912,3.88408282424923,4.78407908307194,3.24406179902447,3.12029478674859,0.782391344348039,1.30815093828268,1.31811709640683,1.55543919259427,1.1198913730029,4.31257693094915,2.18117387875057,2.17608642603403,2.35265659399725,3.08711323243136,2.57880095944881,3.6097046459421,0.606949382578793,1.05798195854407,0.633831403506179,0,0,3.1496490104849,5.93319817540185,1.4209602298922,0.599200221036809,1.15265491596466,1.34796496001021,1.35005938331691,1.89292465216244,0.285650984403804,0.662605622854841,1.10241719293459,0.862609239164127,0.919218786610021,1.10115880999389,0.510749352340751,0.153606533256243,0.791317726381163,0.914876436024097,0,0.279182999001381,1.12552522006336,1.22238598221448,1.17851434189467,0.569486723196412,1.4911955666024,1.51452386666368,2.79614772395106,8.69593466105033,3.44169550792555,0,2.69851595818909,1.29955283489534,1.34408066129201,6.17955448579708,1.1930122580464,0.779358013808606,0.35333957451034,2.95771181531029,0,0,0,4.11332977921307,3.04031838570118,4.54972000513305,7.65031994117702,10.616453229534,4.30482203287992,2.77576522825817,3.95805121805784,5.99600292865752,7.08396410597326,5.52666923537813,3.51866455723091,8.15743393523434,3.61498392299779,7.07688441559899,4.04417124868523,5.30019644304944,4.84875253135222,74.5567044872489,0.292780797011547,0.628340120440365,27.5893619625279,4.07371423320129,1.19980546198682,5.71816021828791,1.9472783122627,0.457500602818626,1.63350657746724,0.521472960576829,0.511430914660661,0.62336413367868,1.46017136760982,3.56437773476107,6.71797641294502,8.08712826987759,5.47148825304832,3.77349284591841,2.98872735763515,1.62055916824814,2.41127708537144,2.99360596265843,3.20284300712124,2.06143794031403,2.58703370739016,2.37124792226126,2.08016688184601,3.16712023495108,1.53437012699302,2.78047249225598,2.78601733217733,3.90986059175093,2.18937693500343,9.12877143507205,9.77922047035918,9.37739548005456,4.14251545071004,3.75241695969754,4.8616756594474,2.60419209143731,3.73852040320067,3.39387648352232,4.88321283975857,1.87791380979733,4.32031766758527,2.63295759861569,1.64167464079095,2.35099547682982,2.48539978623065,1.3173006917463,2.54992195644706,0.841159794256509,2.05809224758569,36.6764849112016,24.5939026997096,4.90562976231038,3.25131340604614,7.60318021800351,11.2942773789072,15.3440850252961,21.1150444984941,22.302865892592,13.5053142873689,16.5881237808178,19.2987777879916,16.9618755793635,19.7740269903929,47.1180948726833,44.4085039357239,0.569003702859245,4.79843752960861,4.50830942692322,3.05476991767971,5.04276466635827,2.87556861550306,3.73095569033118,4.72352473534727,4.86696056308262,4.44229790118482,2.07516838961004,4.83850806576673,4.91397487783007,5.8464149220062,6.6943840058206,8.20002343158217,7.38414970166117,5.4662266115654,2.10775794807546,4.11842119782122,1.43768206527355,3.34926852901653,2.80833905803104,2.27320990152401,1.97337154874103,0.482443521363367,6.83586803616437,2.08440552947533,3.09633455239849,4.07388205860452,4.22442446919304,5.3602002381381,6.42717830392237,5.46374214001837,5.2019597555043,5.75808193086815,5.42146213435456,6.71839590334526,7.59813920209941,6.65385669474953,42.2215595029962,29.3709069262103,15.7364567366092,19.591508987636,0.963303539926752,0.820481806145422,2.78689407140348,1.51482556322624,4.10160685241134,3.51394869866975,1.93881057959519,5.25731355495614,2.22798674082394,1.41538265394416,5.26253912177363,4.09158201075837,1.58115111178609,0.963963949265421,5.81954349353901,2.49291845134157,4.0721739838394,8.41347627159931,13.2745138339963,4.61283208694465,2.72091201268276,19.8035333743693,8.85905678642318,13.2197113615889,9.30341855405596,13.0872142611902,9.9819265947722,7.9009189483954,7.37930260024991,9.28219889233682,13.2771446243977,2.34079422240703,3.23396709456886,2.7863814554107,5.32020700926821,3.38900753443934,2.63278432963394,2.74018454203139,8.68285319835728,6.77862626764225,14.1138174755176,2.80306630000516,3.06782410722221,2.5934557719107,1.90995750405018,2.29797259643086,18.6547735443104,0.741701208042039,7.17657699350981,4.33412422722767,5.74103034846106,10.360265135258,6.42462870288818,5.26189798375002,5.09935289981566,6.57771825921193,6.08079884739465,25.7761066864081,2.21435195506795,5.69294507955176,8.5324219249223,12.3362094648537,8.07941485860857,9.44050424693745,8.1826921168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| |||
|short_description=p3@Golph3l | |||
}} |
Latest revision as of 23:35, 25 September 2015
Short description: | p3@Golph3l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Golph3l_5end |
Coexpression cluster: | MCL_coexpression_mm9:3433 |
Association with transcript: | 32bp_to_ENSMUST00000060323, ENSMUST00000098861_5end |
EntrezGene: | Golph3l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.66e-21 | 47 |
intestine | 6.15e-17 | 31 |
endoderm-derived structure | 9.76e-12 | 118 |
endoderm | 9.76e-12 | 118 |
presumptive endoderm | 9.76e-12 | 118 |
organ component layer | 1.76e-11 | 24 |
digestive system | 4.03e-11 | 116 |
digestive tract | 4.03e-11 | 116 |
primitive gut | 4.03e-11 | 116 |
subdivision of digestive tract | 3.56e-10 | 114 |
mucosa | 9.08e-10 | 15 |
intestinal mucosa | 1.82e-08 | 13 |
wall of intestine | 1.82e-08 | 13 |
gastrointestinal system mucosa | 1.82e-08 | 13 |