Personal tools

FFCP PHASE1:Mm9::chr3:87710284..87710336,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=15191|HGNC=|UniProt=P51859|association_with_transcript=41bp_to_ENSMUST00000005017,NM_008231,uc008ptc.2_5end|description=CAGE_peak_1_at_Hdgf_5end|id=chr3:87710284..87710336,+|ontology_enrichment_celltype=CL:0000219!1.37e-08!54|ontology_enrichment_celltype_v019_2=CL:0000219,1.37e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001041!1.40e-11!92;UBERON:0005057!6.86e-11!51;UBERON:0000077!1.65e-10!97;UBERON:0002405!9.30e-10!70;UBERON:0003104!7.10e-09!131;UBERON:0009142!7.10e-09!131;UBERON:0002390!3.54e-07!45;UBERON:0003061!3.54e-07!45;UBERON:0005911!3.80e-07!69;UBERON:0003929!4.78e-07!55;UBERON:0004177!5.35e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.37e-11,80;UBERON:0002390,3.54e-07,45;UBERON:0003061,3.54e-07,45;UBERON:0005911,3.80e-07,69;UBERON:0003929,4.78e-07,55;UBERON:0004177,5.35e-07,29;UBERON:0005057,5.35e-07,29|phase1_expression=61.3370084411361,22.3344260889191,16.8349718574128,18.7527811010235,22.5403078475856,104.756665673019,104.892075627391,37.0583938277324,246.098686321113,284.622464007544,191.59290644434,206.689663956917,35.0961496358972,32.170708090191,240.838357792724,276.378739987112,375.664728554815,34.8585692720853,35.6497527374921,47.9560306531774,35.378008702845,143.376133534078,123.808700051855,48.6376965291956,44.9642190891653,28.137366241636,44.3684856043847,54.7296931022158,55.2968150618048,56.9588093257443,57.6499327703792,252.107177363474,198.050861602232,158.481681015439,208.262017840669,198.650401203398,204.373525618631,61.1056180875885,75.7895284188086,60.7287543009606,33.5291948177678,43.7149110373405,47.0945042440219,96.6887562052434,88.9075686795143,71.3996865908941,170.561313067873,250.946954993894,149.386604259441,97.9926691334388,186.041954340107,304.75543645374,34.5632168478937,56.5782470768849,46.0448504825176,153.069364441388,121.776711973972,75.803797564784,56.2439761189682,61.8919445748278,80.4965882452848,202.290185645272,263.231259648897,74.2417266757154,79.109309005358,65.3641705750412,140.212851722613,132.555315335936,83.0553794590906,109.084798172006,90.2294084197429,35.7063730504754,37.9893890436775,113.303989273832,119.135920475668,147.994224644213,19.82085857989,14.8117312178818,16.7431121249305,46.8196321442188,38.8822485310241,41.152156273984,14.2383329490704,23.6360296213306,16.1966142643419,43.3104020646292,31.8912564989991,31.6879057903011,153.421267693031,154.241554177949,44.3492667713567,94.6466264679525,195.831744107832,94.9877617282558,91.6184748601213,135.304119903395,74.5759870899602,179.974420642429,150.935668674267,146.989262996302,55.6331508117888,187.356657024904,191.103929779984,305.758682355932,205.666488960653,190.273258971799,198.67110689081,81.2989223599707,26.4116641320115,32.6572705942614,106.693475961174,84.9458684490874,74.2581901164508,49.135580820155,58.7943535678524,51.5233024451669,71.1921507074997,39.4756244391359,111.460929545684,87.0305652717061,114.616748080944,139.644072902944,39.1422698558057,19.3235326027621,19.2690970268379,44.4495276062949,226.929845814213,124.779768046629,205.345486950073,17.6752954497691,17.3850229071078,32.418822845119,19.1206752211504,22.2472447877388,19.9476522777178,20.4423991465375,72.5096270614252,87.4581003388954,36.8975227313165,23.5694878592851,95.2481642486991,92.1907438778226,92.5519347199495,83.9425835344933,115.389902560652,108.256093640698,98.7616176859542,32.855328083855,162.538266671363,100.415328569112,90.0869755719418,86.1439228440369,111.218899690239,98.207110959251,109.681878705434,74.8368843237534,139.03821108802,145.401567519814,172.487244133125,103.355760495215,94.0449500524196,81.0279276574567,73.6276127670004,70.0480665020758,60.1641740260775,59.296155911354,61.7028823219124,66.3227144645523,41.4690821781971,37.5943492741128,30.4008035796959,22.6609980509265,35.7866687924413,43.2144668408397,21.2392848049769,39.7211803784038,9.58214470653014,49.7167065327463,103.658089760124,99.1650588844072,103.996041286929,74.0178535367667,62.0434742327188,47.9368577803649,41.758557415917,45.127513594379,46.9996840456504,46.9537274017116,45.6215963858741,66.5126362404124,40.6339533764425,51.1793072263724,133.146866469063,111.735045332315,95.8015753221184,95.3088214316071,72.3442777135244,77.1494018793504,46.0361990264593,30.5553006317776,40.8196692387574,55.035135109123,147.6334082894,272.95859295153,254.347339676485,244.649978274721,236.129181296217,211.51236910287,159.905034918732,122.270858416595,115.27814623705,114.217547886242,86.2609239164127,88.9416864927723,62.0954969497976,68.7014548016144,87.7253352122151,98.9009218794903,50.8071272958163,102.893836591373,121.571872425751,116.614873927554,111.712558185327,120.772011615549,106.405507476048,146.350235893349,83.5466263762812,75.9623885495298,58.6793548659553,57.516023465224,50.0786447411097,62.488393307213,33.1740824666399,75.0589843669819,55.0775985781321,58.2226534702986,18.9449696185595,15.003095883802,297.869795749419,71.4492723988376,51.7433479842661,54.2709854572327,44.8080667284222,63.0877626594737,56.1452658687633,51.8030051343563,63.9600908646333,49.9757517028343,53.7591378007272,13.8168166061377,37.8980027506077,78.3488656135923,76.06821001812,39.757799636381,49.1157011857862,134.743253066015,140.882777545574,104.675819264523,101.288549258105,66.4059919558883,81.4049123479897,84.7033589682588,94.1153078935664,81.8535203053763,64.3053512307493,59.8186150839484,13.9580238359053,105.515801102348,126.124716688186,90.2358917483004,67.389288784064,67.0666754183785,56.6048630871296,61.1974547720345,86.3591885674454,39.8244293223982,52.7062871351359,105.032543123723,134.338403010993,102.833537002506,109.22569476287,92.9037492557047,42.5562021479582,16.8737024829564,131.570578214347,128.166245005161,178.527524384402,242.995309536051,208.185308819121,182.336204045599,142.951859624832,135.892860206272,145.800972363667,71.6002963511335,123.687373490224,108.775914912864,97.7448334437301,108.516825631509,101.320229578226,92.9215346591415,89.5136925505388,61.774402308231,51.5867593701336,24.853572523477,17.4744810992099,85.0749146990239,81.9019527762633,78.3638289026512,73.7502592057845,58.7967316707908,67.245697744017,61.0658564918126,45.0895181030557,24.1584120826006,23.0424005006292,83.4269358458391,134.812268167959,130.85375942799,128.231852279084,119.41080601021,108.082657001008,101.444959394854,98.9519832069667,101.168382848044,109.28056074327,94.0708307326722,83.3264880324883,87.0717166844982,71.9961717438465,93.1861876658519,471.498164966513,446.775005915189,358.265771320943,26.8533535704745,58.1815673898664,68.6818591002244,104.826137369663,41.6304846349352,32.1908550291728,23.0162618253588,28.6447756719698,30.246160092489,18.4972280338073,22.661816921691,22.2757425076496,24.3173449741079,27.1885445390523,24.8524949640874,133.366741645667,111.327939678888,99.0254913373978,95.5409398078396,142.117724261772,115.821410323509,74.2304070857395,81.1778125521243,82.4762368650965,68.2282471762253,76.2972692669622,79.223063382152,81.5617530062676,75.7417552949604,74.0917549527411,72.8729347663103,69.2988269150236,76.7778697445546,70.0546031365621,78.0154276712306,76.4598432819476,81.8163466394546,77.7301979228266,82.9928038970596,87.3335050254268,77.9300538682341,65.4882142884526,59.7168244963903,72.5193967936902,73.5096375871637,70.2319307295111,71.7112631694102,74.0708188137138,74.0598100868917,75.040671671664,78.690332050453,59.4186285451337,80.5766452681119,71.5418361937474,68.1627485079303,75.5889144122574|short_description=p1@Hdgf}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15191
|HGNC=
|TSSclassifier=NA
|UniProt=P51859
|association_with_transcript=41bp_to_ENSMUST00000005017,NM_008231,uc008ptc.2_5end
|cluster_id=chr3:87710284..87710336,+
|description=CAGE_peak_1_at_Hdgf_5end
|id=chr3:87710284..87710336,+
|ontology_enrichment_celltype=CL:0000219!1.37e-08!54
|ontology_enrichment_celltype_v019_2=CL:0000219,1.37e-08,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001041!1.40e-11!92;UBERON:0005057!6.86e-11!51;UBERON:0000077!1.65e-10!97;UBERON:0002405!9.30e-10!70;UBERON:0003104!7.10e-09!131;UBERON:0009142!7.10e-09!131;UBERON:0002390!3.54e-07!45;UBERON:0003061!3.54e-07!45;UBERON:0005911!3.80e-07!69;UBERON:0003929!4.78e-07!55;UBERON:0004177!5.35e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.37e-11,80;UBERON:0002390,3.54e-07,45;UBERON:0003061,3.54e-07,45;UBERON:0005911,3.80e-07,69;UBERON:0003929,4.78e-07,55;UBERON:0004177,5.35e-07,29;UBERON:0005057,5.35e-07,29
|phase1_expression=61.3370084411361,22.3344260889191,16.8349718574128,18.7527811010235,22.5403078475856,104.756665673019,104.892075627391,37.0583938277324,246.098686321113,284.622464007544,191.59290644434,206.689663956917,35.0961496358972,32.170708090191,240.838357792724,276.378739987112,375.664728554815,34.8585692720853,35.6497527374921,47.9560306531774,35.378008702845,143.376133534078,123.808700051855,48.6376965291956,44.9642190891653,28.137366241636,44.3684856043847,54.7296931022158,55.2968150618048,56.9588093257443,57.6499327703792,252.107177363474,198.050861602232,158.481681015439,208.262017840669,198.650401203398,204.373525618631,61.1056180875885,75.7895284188086,60.7287543009606,33.5291948177678,43.7149110373405,47.0945042440219,96.6887562052434,88.9075686795143,71.3996865908941,170.561313067873,250.946954993894,149.386604259441,97.9926691334388,186.041954340107,304.75543645374,34.5632168478937,56.5782470768849,46.0448504825176,153.069364441388,121.776711973972,75.803797564784,56.2439761189682,61.8919445748278,80.4965882452848,202.290185645272,263.231259648897,74.2417266757154,79.109309005358,65.3641705750412,140.212851722613,132.555315335936,83.0553794590906,109.084798172006,90.2294084197429,35.7063730504754,37.9893890436775,113.303989273832,119.135920475668,147.994224644213,19.82085857989,14.8117312178818,16.7431121249305,46.8196321442188,38.8822485310241,41.152156273984,14.2383329490704,23.6360296213306,16.1966142643419,43.3104020646292,31.8912564989991,31.6879057903011,153.421267693031,154.241554177949,44.3492667713567,94.6466264679525,195.831744107832,94.9877617282558,91.6184748601213,135.304119903395,74.5759870899602,179.974420642429,150.935668674267,146.989262996302,55.6331508117888,187.356657024904,191.103929779984,305.758682355932,205.666488960653,190.273258971799,198.67110689081,81.2989223599707,26.4116641320115,32.6572705942614,106.693475961174,84.9458684490874,74.2581901164508,49.135580820155,58.7943535678524,51.5233024451669,71.1921507074997,39.4756244391359,111.460929545684,87.0305652717061,114.616748080944,139.644072902944,39.1422698558057,19.3235326027621,19.2690970268379,44.4495276062949,226.929845814213,124.779768046629,205.345486950073,17.6752954497691,17.3850229071078,32.418822845119,19.1206752211504,22.2472447877388,19.9476522777178,20.4423991465375,72.5096270614252,87.4581003388954,36.8975227313165,23.5694878592851,95.2481642486991,92.1907438778226,92.5519347199495,83.9425835344933,115.389902560652,108.256093640698,98.7616176859542,32.855328083855,162.538266671363,100.415328569112,90.0869755719418,86.1439228440369,111.218899690239,98.207110959251,109.681878705434,74.8368843237534,139.03821108802,145.401567519814,172.487244133125,103.355760495215,94.0449500524196,81.0279276574567,73.6276127670004,70.0480665020758,60.1641740260775,59.296155911354,61.7028823219124,66.3227144645523,41.4690821781971,37.5943492741128,30.4008035796959,22.6609980509265,35.7866687924413,43.2144668408397,21.2392848049769,39.7211803784038,9.58214470653014,49.7167065327463,103.658089760124,99.1650588844072,103.996041286929,74.0178535367667,62.0434742327188,47.9368577803649,41.758557415917,45.127513594379,46.9996840456504,46.9537274017116,45.6215963858741,66.5126362404124,40.6339533764425,51.1793072263724,133.146866469063,111.735045332315,95.8015753221184,95.3088214316071,72.3442777135244,77.1494018793504,46.0361990264593,30.5553006317776,40.8196692387574,55.035135109123,147.6334082894,272.95859295153,254.347339676485,244.649978274721,236.129181296217,211.51236910287,159.905034918732,122.270858416595,115.27814623705,114.217547886242,86.2609239164127,88.9416864927723,62.0954969497976,68.7014548016144,87.7253352122151,98.9009218794903,50.8071272958163,102.893836591373,121.571872425751,116.614873927554,111.712558185327,120.772011615549,106.405507476048,146.350235893349,83.5466263762812,75.9623885495298,58.6793548659553,57.516023465224,50.0786447411097,62.488393307213,33.1740824666399,75.0589843669819,55.0775985781321,58.2226534702986,18.9449696185595,15.003095883802,297.869795749419,71.4492723988376,51.7433479842661,54.2709854572327,44.8080667284222,63.0877626594737,56.1452658687633,51.8030051343563,63.9600908646333,49.9757517028343,53.7591378007272,13.8168166061377,37.8980027506077,78.3488656135923,76.06821001812,39.757799636381,49.1157011857862,134.743253066015,140.882777545574,104.675819264523,101.288549258105,66.4059919558883,81.4049123479897,84.7033589682588,94.1153078935664,81.8535203053763,64.3053512307493,59.8186150839484,13.9580238359053,105.515801102348,126.124716688186,90.2358917483004,67.389288784064,67.0666754183785,56.6048630871296,61.1974547720345,86.3591885674454,39.8244293223982,52.7062871351359,105.032543123723,134.338403010993,102.833537002506,109.22569476287,92.9037492557047,42.5562021479582,16.8737024829564,131.570578214347,128.166245005161,178.527524384402,242.995309536051,208.185308819121,182.336204045599,142.951859624832,135.892860206272,145.800972363667,71.6002963511335,123.687373490224,108.775914912864,97.7448334437301,108.516825631509,101.320229578226,92.9215346591415,89.5136925505388,61.774402308231,51.5867593701336,24.853572523477,17.4744810992099,85.0749146990239,81.9019527762633,78.3638289026512,73.7502592057845,58.7967316707908,67.245697744017,61.0658564918126,45.0895181030557,24.1584120826006,23.0424005006292,83.4269358458391,134.812268167959,130.85375942799,128.231852279084,119.41080601021,108.082657001008,101.444959394854,98.9519832069667,101.168382848044,109.28056074327,94.0708307326722,83.3264880324883,87.0717166844982,71.9961717438465,93.1861876658519,471.498164966513,446.775005915189,358.265771320943,26.8533535704745,58.1815673898664,68.6818591002244,104.826137369663,41.6304846349352,32.1908550291728,23.0162618253588,28.6447756719698,30.246160092489,18.4972280338073,22.661816921691,22.2757425076496,24.3173449741079,27.1885445390523,24.8524949640874,133.366741645667,111.327939678888,99.0254913373978,95.5409398078396,142.117724261772,115.821410323509,74.2304070857395,81.1778125521243,82.4762368650965,68.2282471762253,76.2972692669622,79.223063382152,81.5617530062676,75.7417552949604,74.0917549527411,72.8729347663103,69.2988269150236,76.7778697445546,70.0546031365621,78.0154276712306,76.4598432819476,81.8163466394546,77.7301979228266,82.9928038970596,87.3335050254268,77.9300538682341,65.4882142884526,59.7168244963903,72.5193967936902,73.5096375871637,70.2319307295111,71.7112631694102,74.0708188137138,74.0598100868917,75.040671671664,78.690332050453,59.4186285451337,80.5766452681119,71.5418361937474,68.1627485079303,75.5889144122574
|short_description=p1@Hdgf
}}

Latest revision as of 19:12, 25 September 2015

Short description:p1@Hdgf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hdgf_5end
Coexpression cluster:NA
Association with transcript: 41bp_to_ENSMUST00000005017, NM_008231, uc008ptc.2_5end
EntrezGene:Hdgf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hdgf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G761.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I422.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7104.76
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8104.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E937.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7246.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2284.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6191.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1206.69
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E832.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1240.84
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3276.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5375.66
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A435.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A647.96
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2143.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9123.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D148.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D244.96
GP2+ M cell, pool1.CNhs13228.11845-124H928.14
GP2+ M cell, pool2.CNhs13231.11846-124I144.37
GP2+ M cell, pool3.CNhs13240.11847-124I254.73
Ileum epithelium, pool1.CNhs13199.10252-104B955.30
Ileum epithelium, pool2.CNhs13232.10253-104C156.96
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C857.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3252.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6198.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9158.48
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5208.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6198.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7204.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G861.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H175.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H360.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G933.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D896.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D988.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B371.40
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7170.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2250.95
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8149.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C397.99
Mouse Astrocytes, donor2.CNhs12078.11552-120C4186.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C4304.76
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I956.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A146.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1153.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1121.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C575.80
Mouse Granule cells, donor1.CNhs12131.11713-123C356.24
Mouse Granule cells, donor2.CNhs12357.11731-123E361.89
Mouse Granule cells, donor3.CNhs12108.11636-122C780.50
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6202.29
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1263.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C774.24
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E779.11
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D265.36
Mouse Microglia, donor1.CNhs12629.11718-123C8140.21
Mouse Microglia, donor2.CNhs12634.11736-123E8132.56
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D583.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5109.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D990.23
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2113.30
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2119.14
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6147.99
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.88
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.69
Mouse Schwann, donor1.CNhs12507.11728-123D9153.42
Mouse Schwann, donor2.CNhs12573.11746-123F9154.24
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G344.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F794.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C4195.83
Mouse hepatocyte, donor3.CNhs12615.11637-122C894.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F491.62
Mouse hepatocyte, donor8.CNhs13091.11824-124F6135.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A774.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7179.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3150.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8146.99
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G655.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1187.36
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8191.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6305.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1205.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2190.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3198.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B681.30
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D732.66
adrenal gland, embryo E14.CNhs11038.406-44C5106.69
adrenal gland, embryo E16.CNhs11004.1254-43D684.95
adrenal gland, embryo E17.CNhs11043.1263-45I174.26
adrenal gland, embryo E18.CNhs11026.1262-18F549.14
adrenal gland, neonate N00.CNhs11191.1311-23C158.79
adrenal gland, neonate N25.CNhs11223.1377-27I351.52
amnion, adult pregnant day17.5.CNhs10488.583-22A871.19
aorta, adult.CNhs10498.46-23H139.48
bone (os femoris), adult.CNhs10483.56-12G2111.46
bone (os femoris), neonate N02.CNhs11227.1985-43F587.03
bone (os femoris), neonate N16.CNhs11225.1525-43A6114.62
bone (os femoris), neonate N20.CNhs11195.1350-25C3139.64
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H744.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7226.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1124.78
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4205.35
corpora quadrigemina, adult.CNhs10501.16-22A417.68
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F132.42
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F219.95
diencephalon, neonate N30.CNhs11201.1388-42B220.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B172.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A287.46
epididymis, adult.CNhs10490.58-23B236.90
eyeball, adult.CNhs10484.31-12G423.57
eyeball, embryo E12.CNhs11016.345-16C695.25
eyeball, embryo E14.CNhs10521.399-16E292.19
eyeball, embryo E15.CNhs10593.426-16C992.55
eyeball, embryo E17.CNhs11023.1261-18D483.94
eyeball, neonate N00.CNhs11207.633-15C6115.39
eyeball, neonate N01.CNhs11140.1532-43E7108.26
eyeball, neonate N02.CNhs11205.1551-44G898.76
eyeball, neonate N16.CNhs11188.777-19A232.86
forelimb, embryo E11.CNhs10596.335-25E2162.54
forelimb, embryo E12.CNhs10600.359-14H2100.42
forelimb, embryo E13.CNhs10589.384-1E290.09
forelimb, embryo E14.CNhs10577.413-26A886.14
forelimb, embryo E15.CNhs11007.437-20E7111.22
forelimb, embryo E17.CNhs10598.1517-43C498.21
forelimb, embryo E18.CNhs11008.1520-43B5109.68
gonad, embryo E13.CNhs11044.1564-45I674.84
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8139.04
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2145.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5172.49
heart, embryo E11.CNhs10586.331-24E9103.36
heart, embryo E12.CNhs11015.353-12F594.04
heart, embryo E13.CNhs11013.376-3I981.03
heart, embryo E14.CNhs10597.403-26D473.63
heart, embryo E15.CNhs11017.431-16C870.05
heart, embryo E16.CNhs11021.457-17C660.16
heart, embryo E17.CNhs11025.479-18E559.30
heart, embryo E18.CNhs11030.1283-20G361.70
heart, neonate N00.CNhs11213.639-21E366.32
heart, neonate N03.CNhs11221.1349-25I241.47
heart, neonate N10.CNhs11118.749-24G137.59
heart, neonate N16.CNhs11209.782-15G130.40
heart, neonate N20.CNhs11127.821-26I622.66
heart, neonate N25.CNhs11196.1351-25D335.79
heart, neonate N30.CNhs11202.1390-42D243.21
hippocampus, adult.CNhs10478.13-16E821.24
hippocampus, neonate N00.CNhs11228.627-43G139.72
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A349.72
intestine, embryo E12.CNhs11019.1251-16I5103.66
intestine, embryo E13.CNhs11010.381-16D599.17
intestine, embryo E15.CNhs10602.976-16D8104.00
intestine, embryo E16.CNhs10585.463-22H474.02
intestine, embryo E17.CNhs10582.482-18D362.04
intestine, embryo E18.CNhs10526.1289-20F747.94
intestine, neonate N00.CNhs11126.644-26D141.76
intestine, neonate N01.CNhs11192.1322-23E945.13
intestine, neonate N06.CNhs11102.688-20B847.00
intestine, neonate N07.CNhs11095.720-20F246.95
intestine, neonate N10.CNhs11098.755-23A545.62
intestine, neonate N20.CNhs11187.827-18D166.51
intestine, neonate N25.CNhs11121.1352-25E340.63
intestine, neonate N30.CNhs11131.1384-42G151.18
kidney, embryo E14.CNhs10606.411-4I9133.15
kidney, embryo E15.CNhs10997.434-16F8111.74
kidney, embryo E16.CNhs10584.464-22A595.80
kidney, embryo E17.CNhs11028.483-18I295.31
kidney, embryo E18.CNhs11001.1288-20C772.34
kidney, neonate N00.CNhs11214.646-21G777.15
kidney, neonate N10.CNhs11206.758-6D546.04
kidney, neonate N20.CNhs11113.832-19I130.56
kidney, neonate N25.CNhs11122.1353-25F340.82
kidney, neonate N30.CNhs11203.1385-42H155.04
liver, adult pregnant day01.CNhs10466.508-5B2147.63
liver, embryo E12.CNhs10601.355-15F8272.96
liver, embryo E13.CNhs10524.378-3H6254.35
liver, embryo E14.CNhs10594.409-16E1244.65
liver, embryo E15.CNhs10520.433-16D7236.13
liver, embryo E16.CNhs10523.462-17F5211.51
liver, embryo E17.CNhs10510.481-18A3159.91
liver, embryo E18.CNhs10579.499-43G4122.27
liver, neonate N00.CNhs11117.641-24F4115.28
liver, neonate N03.CNhs11123.1345-25G2114.22
liver, neonate N06.CNhs11101.684-20A886.26
liver, neonate N07.CNhs11103.716-20H288.94
liver, neonate N10.CNhs11115.751-24B962.10
liver, neonate N20.CNhs11220.823-25A368.70
liver, neonate N25.CNhs11198.1368-26H187.73
liver, neonate N30.CNhs11106.1382-42D198.90
lung, adult.CNhs10474.28-22B150.81
lung, embryo E12.CNhs10522.354-16G2102.89
lung, embryo E14.CNhs10604.404-26F8121.57
lung, embryo E15.CNhs11020.432-17C5116.61
lung, embryo E16.CNhs10998.458-17B6111.71
lung, embryo E17.CNhs10605.480-44A6120.77
lung, embryo E18.CNhs10583.1287-20I6106.41
lung, neonate N00.CNhs11224.640-42C6146.35
lung, neonate N06.CNhs11212.683-20E583.55
lung, neonate N07.CNhs11111.715-19A375.96
lung, neonate N10.CNhs11219.750-23E658.68
lung, neonate N20.CNhs11109.822-18A457.52
lung, neonate N25.CNhs11119.1359-25C750.08
lung, neonate N30.CNhs11133.1394-42H262.49
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A175.06
mammary gland, adult lactating day02.CNhs10480.595-22B655.08
mammary gland, adult pregnant day19.CNhs10476.588-5H258.22
medulla oblongata, adult.CNhs10477.17-12C218.94
medulla oblongata, neonate N30.CNhs11200.1396-42A315.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7297.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C271.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E151.74
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E254.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E344.81
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D763.09
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D856.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D951.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D463.96
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D549.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D653.76
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I737.90
ovary, embryo E18.CNhs11040.505-44H778.35
ovary, neonate N00.CNhs11217.1299-22I476.07
oviduct, adult pregnant day01.CNhs10500.988-6G639.76
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F4134.74
pancreas, embryo E15.CNhs11042.1556-45F2140.88
pancreas, embryo E16.CNhs11003.460-26E5104.68
pancreas, embryo E17.CNhs10599.1558-45G3101.29
pancreas, embryo E18.CNhs10580.1535-43I766.41
pancreas, neonate N00.CNhs11105.645-26G981.40
pancreas, neonate N01.CNhs11138.1531-43D784.70
pancreas, neonate N02.CNhs11139.1539-43D894.12
pancreas, neonate N16.CNhs11136.787-43B681.85
pancreas, neonate N25.CNhs11094.1555-45E264.31
pancreas, neonate N30.CNhs11182.1548-44H559.82
pituitary gland, adult.CNhs10493.21-1G813.96
pituitary gland, embryo E12.CNhs11018.346-16E6105.52
pituitary gland, embryo E13.CNhs11009.370-44C7126.12
pituitary gland, embryo E14.CNhs11037.398-44A590.24
pituitary gland, embryo E15.CNhs10592.427-16B967.39
pituitary gland, embryo E16.CNhs11036.449-43F667.07
pituitary gland, embryo E17.CNhs11039.1265-44F556.60
pituitary gland, neonate N00.CNhs11190.1308-22E961.20
placenta, adult pregnant day10.CNhs10472.539-13I786.36
placenta, adult pregnant day17.CNhs10464.577-18G339.82
prostate, adult.CNhs10470.859-1F852.71
skin, adult.CNhs10492.30-1C3105.03
skin, neonate N00.CNhs11124.650-25G4134.34
skin, neonate N03.CNhs11215.662-22H3102.83
skin, neonate N06.CNhs11097.693-20I5109.23
skin, neonate N10.CNhs11108.762-6C492.90
small intestine, neonate N16.CNhs11114.790-21I142.56
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G2131.57
spleen, embryo E16.CNhs11035.461-43C1128.17
spleen, embryo E18.CNhs11011.1271-21F2178.53
spleen, neonate N10.CNhs11116.752-24D1243.00
spleen, neonate N20.CNhs11112.824-19H1208.19
spleen, neonate N25.CNhs11099.1354-25G3182.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6142.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9135.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3145.80
stomach, adult.CNhs10503.33-1H671.60
stomach, embryo E12.CNhs10588.356-43E3123.69
stomach, embryo E15.CNhs10603.1252-16G8108.78
stomach, embryo E16.CNhs11022.459-17D497.74
stomach, embryo E17.CNhs11006.1035-18D5108.52
stomach, embryo E18.CNhs10999.1286-20C6101.32
stomach, neonate N03.CNhs11193.1340-24B892.92
stomach, neonate N07.CNhs11210.718-18A989.51
stomach, neonate N25.CNhs11104.1355-25E461.77
stomach, neonate N30.CNhs11134.1386-42I151.59
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F585.07
testis, embryo E15.CNhs11034.443-27C581.90
testis, embryo E16.CNhs11033.470-26G578.36
testis, embryo E17.CNhs11029.486-18I573.75
testis, embryo E18.CNhs11027.503-18G558.80
testis, neonate N00.CNhs11189.1300-22B767.25
testis, neonate N07.CNhs11222.726-26I461.07
testis, neonate N10.CNhs11204.763-44D945.09
testis, neonate N20.CNhs11110.839-18H324.16
testis, neonate N30.CNhs11130.1391-42E223.04
thymus, adult.CNhs10471.38-12B583.43
thymus, embryo E14.CNhs11041.402-44I4134.81
thymus, embryo E15.CNhs11005.430-45I2130.85
thymus, embryo E16.CNhs11002.456-26C5128.23
thymus, embryo E17.CNhs10581.478-18C1119.41
thymus, embryo E18.CNhs10595.1273-19G4108.08
thymus, neonate N02.CNhs11181.1541-43F8101.44
thymus, neonate N03.CNhs11137.2104-43C798.95
thymus, neonate N06.CNhs11197.681-26C4101.17
thymus, neonate N07.CNhs11211.713-19D3109.28
thymus, neonate N10.CNhs11194.748-24E494.07
thymus, neonate N20.CNhs11186.820-7A283.33
thymus, neonate N25.CNhs11125.1362-25G787.07
thymus, neonate N30.CNhs11132.1393-42G272.00
tongue, adult.CNhs10499.32-1B493.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3471.50
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7446.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5358.27
urinary bladder, adult.CNhs10481.879-12E426.85
uterus, adult pregnant day19.CNhs10497.590-15F558.18
uterus, adult.CNhs10509.92-27E568.68
vagina, adult.CNhs10502.89-27D5104.83
vesicular gland, adult.CNhs10491.51-27F841.63
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I8133.37
whole body, embryo E12.CNhs10587.857-27C9111.33
whole body, embryo E13.CNhs10512.372-23H299.03
whole body, embryo E14.5.CNhs10578.420-27D295.54
whole body, embryo E14.CNhs10519.395-14B1142.12
whole body, embryo E16.CNhs10514.453-14F2115.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G574.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G581.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G582.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G568.23
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G576.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G579.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G581.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G575.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G574.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G572.87
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G569.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G576.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G570.05
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G578.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G576.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G581.82
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G577.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G582.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G587.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G577.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G565.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G559.72
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G572.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G573.51
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G571.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G574.07
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G574.06
whole body, embryo E17.5.CNhs10513.490-9F975.04
whole body, embryo E17.CNhs10517.475-3I578.69
whole body, embryo E18.CNhs10516.493-3B359.42
whole body, neonate N00.CNhs10525.657-19C280.58
whole body, neonate N01.CNhs10576.659-23C671.54
whole body, neonate N06.CNhs10515.692-21D168.16
whole body, neonate N10.CNhs10518.761-6B475.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell1.37e-0854

Uber anatomy
Ontology termp-valuen
foregut1.37e-1180
hematopoietic system3.54e-0745
blood island3.54e-0745
endo-epithelium3.80e-0769
gut epithelium4.78e-0755
hemopoietic organ5.35e-0729
immune organ5.35e-0729
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:87710284..87710336,%2B&oldid=4208964"