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FFCP PHASE1:Mm9::chr3:118265080..118265106,+: Difference between revisions

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{{FFCP|EntrezGene=99586|HGNC=|MCL_coexpression_id=175|UniProt=Q8CHR6,Q3UEP3|association_with_transcript=0bp_to_ENSMUST00000149101,ENSMUST00000150950,NM_170778,uc008rdf.1,uc008rdg.1,uc008rdh.1_5end|description=CAGE_peak_1_at_Dpyd_5end|id=chr3:118265080..118265106,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.33e-10!43;UBERON:0009854!1.25e-09!23;UBERON:0009856!1.25e-09!23;UBERON:0002107!3.29e-09!22;UBERON:0007499!3.29e-09!22;UBERON:0006925!3.29e-09!22;UBERON:0009497!3.29e-09!22;UBERON:0000015!3.29e-09!22;UBERON:0002423!3.29e-09!22;UBERON:0006235!3.29e-09!22;UBERON:0008835!3.29e-09!22;UBERON:0003894!3.29e-09!22;UBERON:0004161!3.29e-09!22;UBERON:0008836!3.29e-09!22;UBERON:0000344!7.22e-09!15;UBERON:0002365!1.05e-08!25;UBERON:0002330!1.05e-08!25;UBERON:0001007!3.55e-08!128;UBERON:0001555!3.55e-08!128;UBERON:0007026!3.55e-08!128;UBERON:0001242!5.52e-08!13;UBERON:0000060!5.52e-08!13;UBERON:0001262!5.52e-08!13;UBERON:0004786!5.52e-08!13;UBERON:0005409!7.61e-08!59;UBERON:0004921!1.55e-07!126;UBERON:0004185!1.55e-07!126;UBERON:0004119!1.61e-07!130;UBERON:0000925!1.61e-07!130;UBERON:0006595!1.61e-07!130;UBERON:0000468!5.12e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-15,31;UBERON:0005409,8.94e-11,47;UBERON:0001007,9.57e-10,116;UBERON:0001555,9.57e-10,116;UBERON:0007026,9.57e-10,116;UBERON:0009854,1.19e-09,23;UBERON:0009856,1.19e-09,23;UBERON:0002107,3.13e-09,22;UBERON:0007499,3.13e-09,22;UBERON:0006925,3.13e-09,22;UBERON:0009497,3.13e-09,22;UBERON:0000015,3.13e-09,22;UBERON:0002423,3.13e-09,22;UBERON:0006235,3.13e-09,22;UBERON:0008835,3.13e-09,22;UBERON:0003894,3.13e-09,22;UBERON:0004161,3.13e-09,22;UBERON:0008836,3.13e-09,22;UBERON:0004921,4.92e-09,114;UBERON:0000344,6.89e-09,15;UBERON:0004119,7.61e-09,118;UBERON:0000925,7.61e-09,118;UBERON:0006595,7.61e-09,118;UBERON:0002365,1.01e-08,25;UBERON:0002330,1.01e-08,25;UBERON:0001242,5.30e-08,13;UBERON:0001262,5.30e-08,13;UBERON:0004786,5.30e-08,13|phase1_expression=27.8658993962341,236.954301787126,204.294658485902,627.310774250366,545.475449911572,56.7431939062187,53.4972946963754,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,10.8855411393369,0,0,64.7969312313297,57.1229109857253,124.034104248844,107.690499039769,92.4371588222464,152.018735565099,152.730258634518,22.3947815761858,0,0,0,60.0811369082651,43.553477083925,67.1717182103194,0,0,0,0,0,0,1.1330713617802,2.63580021170738,0.367093504323363,6.25913075478431,3.48840250208714,0,3.30530828426282,3.21968769738334,0,0,0,0,0.514518872071894,3.72493471920384,4.12537673821954,1.41621522601718,0,1.90149421051854,6.43804610931351,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0,1.34796496001021,0.270011876663381,1.26194976810829,2.57085885963423,3.97563373712904,4.04219637409348,3.1629005436018,4.5960939330501,2.20231761998777,6.51205424234457,8.1411462625809,3.03338461779446,2.56165402086747,3.12548022334056,4.74611098302348,12.380777420697,11.7654650788144,7.95497180778903,6.26435395516053,2.23679334990361,1.06016670666458,2.56943304363071,13.0439019915755,452.582959292209,168.632890759522,641.707094857365,645.227982525535,694.889701887967,115.726202188564,0,0,0,20.703982707172,0,0,0,3.89683873820185,1.77351905832569,5.05524445014783,246.979731832327,8.2860122767095,26.1258164754092,5.20455980298408,10.9607572192371,11.761390360059,15.5244319769201,27.2805800554835,21.9916534826932,1.48316980640624,41.9338135067744,0.884610551949874,4.36770494858005,2.87093973998512,1.45462575940567,44.7340226923493,3.51336956413857,1.8850203613211,174.221711652259,0,0,0,10.6351353977424,7.32000964509802,7.91622418311046,9.73416193076748,10.4843337505436,8.10373373782284,10.707923362472,15.6832620329487,13.9335807083304,19.9650979162603,28.6200924005605,6.76626303406059,3.67843367093557,6.84236093260327,9.64510834148576,11.9063873514824,10.6334387836425,7.12133106653939,12.9351685369508,4.095791865724,10.2117283290622,10.9089696981648,5.91828477554452,14.4584569597311,4.52727816478817,8.0255033199098,6.96619933864726,0,0,0,0.828503090142008,2.81431271977315,2.16074473753218,2.60419209143731,3.34499193970586,2.62254091908543,3.48800917125612,4.56064782379353,6.77238985729583,4.77223564749093,7.05920095540109,8.67436262140656,8.91819923294527,5.48875288227627,13.6890547135579,21.449574753541,8.12946437796347,397.493795929509,166.868307564696,5.11891801284562,9.52170354627798,25.3868898804524,75.6313217337535,100.737253861726,107.477478753596,210.690903325763,130.606271096141,131.950984620141,138.871617484723,143.688532206792,181.561520548153,174.855682348628,197.149860521824,1.13800740571849,3.54170389090159,9.01661885384643,4.07302655690629,6.59438456369928,8.90724912607046,16.1885535038099,36.7549268469209,39.8776768717092,47.2611137820496,510.49142384407,4.17112764290235,5.30709286805648,7.64531182108503,12.9830477688642,20.9824128984603,29.2819729548633,51.4976086036951,233.4747265560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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=99586
|HGNC=
|MCL_coexpression_id=175
|TSSclassifier=NA
|UniProt=Q8CHR6,Q3UEP3
|association_with_transcript=0bp_to_ENSMUST00000149101,ENSMUST00000150950,NM_170778,uc008rdf.1,uc008rdg.1,uc008rdh.1_5end
|cluster_id=chr3:118265080..118265106,+
|description=CAGE_peak_1_at_Dpyd_5end
|id=chr3:118265080..118265106,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!5.33e-10!43;UBERON:0009854!1.25e-09!23;UBERON:0009856!1.25e-09!23;UBERON:0002107!3.29e-09!22;UBERON:0007499!3.29e-09!22;UBERON:0006925!3.29e-09!22;UBERON:0009497!3.29e-09!22;UBERON:0000015!3.29e-09!22;UBERON:0002423!3.29e-09!22;UBERON:0006235!3.29e-09!22;UBERON:0008835!3.29e-09!22;UBERON:0003894!3.29e-09!22;UBERON:0004161!3.29e-09!22;UBERON:0008836!3.29e-09!22;UBERON:0000344!7.22e-09!15;UBERON:0002365!1.05e-08!25;UBERON:0002330!1.05e-08!25;UBERON:0001007!3.55e-08!128;UBERON:0001555!3.55e-08!128;UBERON:0007026!3.55e-08!128;UBERON:0001242!5.52e-08!13;UBERON:0000060!5.52e-08!13;UBERON:0001262!5.52e-08!13;UBERON:0004786!5.52e-08!13;UBERON:0005409!7.61e-08!59;UBERON:0004921!1.55e-07!126;UBERON:0004185!1.55e-07!126;UBERON:0004119!1.61e-07!130;UBERON:0000925!1.61e-07!130;UBERON:0006595!1.61e-07!130;UBERON:0000468!5.12e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-15,31;UBERON:0005409,8.94e-11,47;UBERON:0001007,9.57e-10,116;UBERON:0001555,9.57e-10,116;UBERON:0007026,9.57e-10,116;UBERON:0009854,1.19e-09,23;UBERON:0009856,1.19e-09,23;UBERON:0002107,3.13e-09,22;UBERON:0007499,3.13e-09,22;UBERON:0006925,3.13e-09,22;UBERON:0009497,3.13e-09,22;UBERON:0000015,3.13e-09,22;UBERON:0002423,3.13e-09,22;UBERON:0006235,3.13e-09,22;UBERON:0008835,3.13e-09,22;UBERON:0003894,3.13e-09,22;UBERON:0004161,3.13e-09,22;UBERON:0008836,3.13e-09,22;UBERON:0004921,4.92e-09,114;UBERON:0000344,6.89e-09,15;UBERON:0004119,7.61e-09,118;UBERON:0000925,7.61e-09,118;UBERON:0006595,7.61e-09,118;UBERON:0002365,1.01e-08,25;UBERON:0002330,1.01e-08,25;UBERON:0001242,5.30e-08,13;UBERON:0001262,5.30e-08,13;UBERON:0004786,5.30e-08,13
|phase1_expression=27.8658993962341,236.954301787126,204.294658485902,627.310774250366,545.475449911572,56.7431939062187,53.4972946963754,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,10.8855411393369,0,0,64.7969312313297,57.1229109857253,124.034104248844,107.690499039769,92.4371588222464,152.018735565099,152.730258634518,22.3947815761858,0,0,0,60.0811369082651,43.553477083925,67.1717182103194,0,0,0,0,0,0,1.1330713617802,2.63580021170738,0.367093504323363,6.25913075478431,3.48840250208714,0,3.30530828426282,3.21968769738334,0,0,0,0,0.514518872071894,3.72493471920384,4.12537673821954,1.41621522601718,0,1.90149421051854,6.43804610931351,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0,1.34796496001021,0.270011876663381,1.26194976810829,2.57085885963423,3.97563373712904,4.04219637409348,3.1629005436018,4.5960939330501,2.20231761998777,6.51205424234457,8.1411462625809,3.03338461779446,2.56165402086747,3.12548022334056,4.74611098302348,12.380777420697,11.7654650788144,7.95497180778903,6.26435395516053,2.23679334990361,1.06016670666458,2.56943304363071,13.0439019915755,452.582959292209,168.632890759522,641.707094857365,645.227982525535,694.889701887967,115.726202188564,0,0,0,20.703982707172,0,0,0,3.89683873820185,1.77351905832569,5.05524445014783,246.979731832327,8.2860122767095,26.1258164754092,5.20455980298408,10.9607572192371,11.761390360059,15.5244319769201,27.2805800554835,21.9916534826932,1.48316980640624,41.9338135067744,0.884610551949874,4.36770494858005,2.87093973998512,1.45462575940567,44.7340226923493,3.51336956413857,1.8850203613211,174.221711652259,0,0,0,10.6351353977424,7.32000964509802,7.91622418311046,9.73416193076748,10.4843337505436,8.10373373782284,10.707923362472,15.6832620329487,13.9335807083304,19.9650979162603,28.6200924005605,6.76626303406059,3.67843367093557,6.84236093260327,9.64510834148576,11.9063873514824,10.6334387836425,7.12133106653939,12.9351685369508,4.095791865724,10.2117283290622,10.9089696981648,5.91828477554452,14.4584569597311,4.52727816478817,8.0255033199098,6.96619933864726,0,0,0,0.828503090142008,2.81431271977315,2.16074473753218,2.60419209143731,3.34499193970586,2.62254091908543,3.48800917125612,4.56064782379353,6.77238985729583,4.77223564749093,7.05920095540109,8.67436262140656,8.91819923294527,5.48875288227627,13.6890547135579,21.449574753541,8.12946437796347,397.493795929509,166.868307564696,5.11891801284562,9.52170354627798,25.3868898804524,75.6313217337535,100.737253861726,107.477478753596,210.690903325763,130.606271096141,131.950984620141,138.871617484723,143.688532206792,181.561520548153,174.855682348628,197.149860521824,1.13800740571849,3.54170389090159,9.01661885384643,4.07302655690629,6.59438456369928,8.90724912607046,16.1885535038099,36.7549268469209,39.8776768717092,47.2611137820496,510.49142384407,4.17112764290235,5.30709286805648,7.64531182108503,12.9830477688642,20.9824128984603,29.2819729548633,51.4976086036951,233.474726556051,121.081583215944,231.466812509041,238.914488403179,291.755224362114,351.337219224432,407.052731281219,651.298753840546,4.80358294433172,3.7898282354097,6.51859905768104,8.48725428875941,13.3773441524446,20.2682571504597,21.4239276797412,16.0009591243395,22.3841904630791,25.2469746199603,19.1345722388985,9.99566219766002,7.59813920209941,8.96824163205372,0,0,4.42587845717133,6.89841865761831,12.36239542906,7.97039468826982,0.163934945376675,6.81671503451807,11.3582958989852,12.4940398174924,15.5104846367615,6.69112634267146,12.0311284004493,14.7199796010193,21.8597778904443,28.0565623594859,25.693705566524,9.3183181762324,22.2845933776982,11.2181330310371,17.7546785695398,22.9308470931824,9.2921596837974,2.6705869977048,1.81394134178851,3.20628635585027,2.36241514304618,4.30409207121498,27.9102556621679,6.5436071305951,7.12994756769443,5.37262488490887,4.21674434299995,4.12542172992747,22.8094535855038,7.38250485528372,4.78627129996192,9.85950361145325,17.0246624296583,13.0209236849512,15.6321569572015,8.22055362609418,0.469343416127421,0.847328283455281,11.2469483008031,21.9298716412168,19.2142667768128,3.98065304525829,3.58117032009409,2.79039529566604,214.8213765962,14.6485988588303,1.36696704638282,4.33412422722767,4.07427960213366,1.69531611304222,0.546776910884101,0.686334519619568,0,0,0,5.72802370809068,7.43389584915668,13.2157653632452,20.629020096964,12.5452977608681,17.9057302271866,12.9469772529428,31.8215804542543,6.28214260761671,40.9583315602065,39.7657160375632,1.69107881605257,4.63501292736334,4.46737924234164,4.86127970860119,4.52059382172059,6.75824501963113,17.9556575128004,14.9735042570543,10.3810750981454,3.8653459332161,7.20075015644664,3.16011120628178,7.70355818102624,9.96296284498824,5.58659538804519,5.90788095702689,4.17230845040656,3.00488623799922,3.10148007066612,2.82706059854813,1.5241361331,1.71404514732629,1.55932609183604,0.865906574762965,2.33753804363138,7.70883304291719,0,0.179427713218951,0,14.4892195524143,2.25218970541418,15.9341913112521,22.93741656146,4.01257683228291,7.34177395402186,7.36520378411483,4.01026859407578,6.35856774671644,8.90607275701835,3.0215755895588,8.10027000278167,4.5032120322422,4.53142408984205,3.10656187051092,4.56664329370377,7.98049746802062,7.17081144167364,10.4535888339366,5.03071590307158,11.2144540154509,24.2248933303761,22.0457511245617,19.5760717851007,22.7427490587418,18.7574681918777,20.5602712110823,21.0693391807235,19.2075457214608,21.7106072652218,17.6228665774737,21.9021376035777,22.5703787942535,23.0768104449852,23.8462250617724,23.6579784145937,23.9592338315106,21.9361294751535,22.8193874112756,19.5747511263888,22.3382564834026,24.8782043106971,18.6779495120868,25.3953692891762,24.6902599529405,22.4220184254689,20.4889323341172,24.9630936333511,20.7615367189194,17.9403148212461,7.49431733813838,20.5859815431959,30.5116896748584,22.7633115161924,11.4707537942148,6.72416723299222
|short_description=p1@Dpyd
}}

Latest revision as of 12:38, 1 October 2015

Short description:p1@Dpyd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dpyd_5end
Coexpression cluster:MCL_coexpression_mm9:175
Association with transcript: 0bp_to_ENSMUST00000149101, ENSMUST00000150950, NM_170778, uc008rdf.1, uc008rdg.1, uc008rdh.1_5end
EntrezGene:Dpyd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dpyd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5236.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6204.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I3627.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I4545.48
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I756.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I853.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D164.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.12
GP2+ M cell, pool1.CNhs13228.11845-124H9124.03
GP2+ M cell, pool2.CNhs13231.11846-124I1107.69
GP2+ M cell, pool3.CNhs13240.11847-124I292.44
Ileum epithelium, pool1.CNhs13199.10252-104B9152.02
Ileum epithelium, pool2.CNhs13232.10253-104C1152.73
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F560.08
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F643.55
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F767.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7452.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C4168.63
Mouse hepatocyte, donor3.CNhs12615.11637-122C8641.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F4645.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F6694.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7115.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6246.98
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D726.13
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F515.52
adrenal gland, neonate N00.CNhs11191.1311-23C127.28
adrenal gland, neonate N25.CNhs11223.1377-27I321.99
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H141.93
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H7174.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.93
epididymis, adult.CNhs10490.58-23B219.97
eyeball, adult.CNhs10484.31-12G428.62
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D49.65
eyeball, neonate N00.CNhs11207.633-15C611.91
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E210.91
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B58.03
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E36.77
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G18.67
heart, neonate N20.CNhs11127.821-26I68.92
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D213.69
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I3397.49
intestine, adult.CNhs10496.178-9A3166.87
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D825.39
intestine, embryo E16.CNhs10585.463-22H475.63
intestine, embryo E17.CNhs10582.482-18D3100.74
intestine, embryo E18.CNhs10526.1289-20F7107.48
intestine, neonate N00.CNhs11126.644-26D1210.69
intestine, neonate N01.CNhs11192.1322-23E9130.61
intestine, neonate N06.CNhs11102.688-20B8131.95
intestine, neonate N07.CNhs11095.720-20F2138.87
intestine, neonate N10.CNhs11098.755-23A5143.69
intestine, neonate N20.CNhs11187.827-18D1181.56
intestine, neonate N25.CNhs11121.1352-25E3174.86
intestine, neonate N30.CNhs11131.1384-42G1197.15
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G78.91
kidney, neonate N10.CNhs11206.758-6D516.19
kidney, neonate N20.CNhs11113.832-19I136.75
kidney, neonate N25.CNhs11122.1353-25F339.88
kidney, neonate N30.CNhs11203.1385-42H147.26
liver, adult pregnant day01.CNhs10466.508-5B2510.49
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E17.65
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F520.98
liver, embryo E17.CNhs10510.481-18A329.28
liver, embryo E18.CNhs10579.499-43G451.50
liver, neonate N00.CNhs11117.641-24F4233.47
liver, neonate N03.CNhs11123.1345-25G2121.08
liver, neonate N06.CNhs11101.684-20A8231.47
liver, neonate N07.CNhs11103.716-20H2238.91
liver, neonate N10.CNhs11115.751-24B9291.76
liver, neonate N20.CNhs11220.823-25A3351.34
liver, neonate N25.CNhs11198.1368-26H1407.05
liver, neonate N30.CNhs11106.1382-42D1651.30
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A620.27
lung, embryo E18.CNhs10583.1287-20I621.42
lung, neonate N00.CNhs11224.640-42C616.00
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A325.25
lung, neonate N10.CNhs11219.750-23E619.13
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D528.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.69
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I722.28
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I417.75
oviduct, adult pregnant day01.CNhs10500.988-6G622.93
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G927.91
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G822.81
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B917.02
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F515.63
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F811.25
skin, adult.CNhs10492.30-1C321.93
skin, neonate N00.CNhs11124.650-25G419.21
skin, neonate N03.CNhs11215.662-22H33.98
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I1214.82
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D420.63
stomach, embryo E17.CNhs11006.1035-18D512.55
stomach, embryo E18.CNhs10999.1286-20C617.91
stomach, neonate N03.CNhs11193.1340-24B812.95
stomach, neonate N07.CNhs11210.718-18A931.82
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I140.96
submandibular gland, adult.CNhs10469.59-29C139.77
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B717.96
testis, neonate N07.CNhs11222.726-26I414.97
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I29.96
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E414.49
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E515.93
vagina, adult.CNhs10502.89-27D522.94
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I84.57
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.85
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.76
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B320.59
whole body, neonate N00.CNhs10525.657-19C230.51
whole body, neonate N01.CNhs10576.659-23C622.76
whole body, neonate N06.CNhs10515.692-21D111.47
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.75e-1531
gastrointestinal system8.94e-1147
digestive system9.57e-10116
digestive tract9.57e-10116
primitive gut9.57e-10116
digestive tract diverticulum1.19e-0923
sac1.19e-0923
liver3.13e-0922
epithelial sac3.13e-0922
digestive gland3.13e-0922
epithelium of foregut-midgut junction3.13e-0922
anatomical boundary3.13e-0922
hepatobiliary system3.13e-0922
foregut-midgut junction3.13e-0922
hepatic diverticulum3.13e-0922
liver primordium3.13e-0922
septum transversum3.13e-0922
liver bud3.13e-0922
subdivision of digestive tract4.92e-09114
mucosa6.89e-0915
endoderm-derived structure7.61e-09118
endoderm7.61e-09118
presumptive endoderm7.61e-09118
exocrine gland1.01e-0825
exocrine system1.01e-0825
intestinal mucosa5.30e-0813
wall of intestine5.30e-0813
gastrointestinal system mucosa5.30e-0813
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