FFCP PHASE1:Mm9::chr3:117278409..117278425,+: Difference between revisions
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{{FFCP|EntrezGene=75769|HGNC=|UniProt=Q8BJ52|association_with_transcript=30bp_to_NM_029425,uc008rda.2,uc008rdb.2_5end|description=CAGE_peak_4_at_4833424O15Rik_5end|id=chr3:117278409..117278425,+|ontology_enrichment_celltype=CL:0000540!7.27e-14!33;CL:0000047!7.27e-14!33;CL:0000031!7.27e-14!33;CL:0000404!7.27e-14!33;CL:0000221!6.96e-11!44;CL:0000133!6.96e-11!44;CL:0002319!1.03e-10!43;CL:0000393!1.85e-10!39;CL:0000211!1.85e-10!39;CL:0000117!4.62e-10!23;CL:0000337!4.62e-10!23;CL:0000055!5.93e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.15e-11,23;CL:0000337,8.15e-11,23;CL:0000540,5.06e-09,33;CL:0000047,5.06e-09,33;CL:0000031,5.06e-09,33;CL:0000404,5.06e-09,33;CL:0002319,2.42e-08,43;CL:0000221,4.59e-08,44;CL:0000133,4.59e-08,44;CL:0000393,4.08e-07,39;CL:0000211,4.08e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.87e-24!73;UBERON:0005743!7.87e-24!73;UBERON:0000073!5.21e-23!75;UBERON:0001016!5.21e-23!75;UBERON:0004121!5.25e-23!102;UBERON:0000924!5.25e-23!102;UBERON:0006601!5.25e-23!102;UBERON:0002346!5.52e-20!71;UBERON:0003075!5.52e-20!71;UBERON:0007284!5.52e-20!71;UBERON:0000033!9.53e-18!63;UBERON:0002020!1.61e-15!34;UBERON:0003056!1.88e-15!49;UBERON:0001049!5.55e-15!52;UBERON:0005068!5.55e-15!52;UBERON:0006241!5.55e-15!52;UBERON:0007135!5.55e-15!52;UBERON:0000955!1.13e-13!50;UBERON:0006238!1.13e-13!50;UBERON:0002616!5.90e-13!49;UBERON:0002791!5.94e-12!29;UBERON:0003528!5.94e-12!29;UBERON:0001893!5.94e-12!29;UBERON:0003080!6.12e-11!40;UBERON:0002780!2.36e-10!39;UBERON:0001890!2.36e-10!39;UBERON:0006240!2.36e-10!39;UBERON:0002021!1.63e-08!10;UBERON:0000411!1.63e-08!10;UBERON:0001950!1.63e-08!10;UBERON:0007811!2.20e-08!86;UBERON:0000956!8.35e-08!21;UBERON:0001869!8.35e-08!21;UBERON:0000203!8.35e-08!21;UBERON:0000153!4.42e-07!94;UBERON:0002619!6.00e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.74e-27,95;UBERON:0000924,2.74e-27,95;UBERON:0006601,2.74e-27,95;UBERON:0001017,3.70e-26,73;UBERON:0002346,3.82e-26,64;UBERON:0003075,3.82e-26,64;UBERON:0007284,3.82e-26,64;UBERON:0002020,1.10e-25,34;UBERON:0000073,2.36e-25,54;UBERON:0001016,3.20e-25,75;UBERON:0010371,7.16e-22,73;UBERON:0001049,3.57e-21,52;UBERON:0005068,3.57e-21,52;UBERON:0006241,3.57e-21,52;UBERON:0007135,3.57e-21,52;UBERON:0003056,5.60e-21,49;UBERON:0002021,9.24e-19,10;UBERON:0000411,9.24e-19,10;UBERON:0001950,9.24e-19,10;UBERON:0010314,6.61e-18,92;UBERON:0003528,8.80e-18,29;UBERON:0002791,8.80e-18,29;UBERON:0001893,8.80e-18,29;UBERON:0000955,1.90e-16,47;UBERON:0006238,1.90e-16,47;UBERON:0002616,4.56e-15,46;UBERON:0002619,8.46e-15,17;UBERON:0003080,8.88e-15,40;UBERON:0002780,1.37e-13,39;UBERON:0001890,1.37e-13,39;UBERON:0006240,1.37e-13,39;UBERON:0000956,1.45e-13,21;UBERON:0001869,1.45e-13,21;UBERON:0000203,1.45e-13,21;UBERON:0001948,1.92e-10,5;UBERON:0002315,1.92e-10,5;UBERON:0002240,1.30e-08,6;UBERON:0005174,1.30e-08,6;UBERON:0001137,1.30e-08,6;UBERON:0000025,4.54e-08,114;UBERON:0000970,1.80e-07,9;UBERON:0000019,1.80e-07,9;UBERON:0000047,1.80e-07,9;UBERON:0010312,1.80e-07,9;UBERON:0004088,1.80e-07,9;UBERON:0002104,1.80e-07,9;UBERON:0001456,1.80e-07,9;UBERON:0003072,1.80e-07,9;UBERON:0004128,1.80e-07,9;UBERON:0003071,1.80e-07,9;UBERON:0003076,3.24e-07,12;UBERON:0003057,3.24e-07,12;UBERON:0004111,4.50e-07,122|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,1.49800055259202,3.07374644257244,0.103689612308478,0.675029691658453,0.210324961351382,3.71346279724945,3.97563373712904,0.734944795289724,0.0958454710182364,0,1.10115880999389,1.65993539510744,1.22885226604995,1.45074916503213,0.548925861614458,1.56274011167028,0.837548997004143,2.25105044012672,1.22238598221448,3.83017161115768,2.84743361598206,1.3047961207771,0.075726193333184,0,3.18850937571846,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,2.04946557908083,0.41889341362691,0,0,0,0,1.9472783122627,0.915001205637253,1.88481528169297,2.25971616249959,1.53429274398198,1.87009240103604,0.973447578406546,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,1.37941262660084,1.62055916824814,0.90422890701429,2.9255694635071,3.20284300712124,2.62364828767241,3.62184719034622,0,0,0,0,0.278047249225598,0,0,0,0,0,0,1.03562886267751,1.17263029990548,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.268412837520744,3.15434922846191,1.9551876352064,0,0,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,0,0.823494773620054,0.251335208800269,0.596869416123452,0.779856348476481,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75769 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BJ52 | |||
|association_with_transcript=30bp_to_NM_029425,uc008rda.2,uc008rdb.2_5end | |||
|cluster_id=chr3:117278409..117278425,+ | |||
|description=CAGE_peak_4_at_4833424O15Rik_5end | |||
|id=chr3:117278409..117278425,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.27e-14!33;CL:0000047!7.27e-14!33;CL:0000031!7.27e-14!33;CL:0000404!7.27e-14!33;CL:0000221!6.96e-11!44;CL:0000133!6.96e-11!44;CL:0002319!1.03e-10!43;CL:0000393!1.85e-10!39;CL:0000211!1.85e-10!39;CL:0000117!4.62e-10!23;CL:0000337!4.62e-10!23;CL:0000055!5.93e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.15e-11,23;CL:0000337,8.15e-11,23;CL:0000540,5.06e-09,33;CL:0000047,5.06e-09,33;CL:0000031,5.06e-09,33;CL:0000404,5.06e-09,33;CL:0002319,2.42e-08,43;CL:0000221,4.59e-08,44;CL:0000133,4.59e-08,44;CL:0000393,4.08e-07,39;CL:0000211,4.08e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.87e-24!73;UBERON:0005743!7.87e-24!73;UBERON:0000073!5.21e-23!75;UBERON:0001016!5.21e-23!75;UBERON:0004121!5.25e-23!102;UBERON:0000924!5.25e-23!102;UBERON:0006601!5.25e-23!102;UBERON:0002346!5.52e-20!71;UBERON:0003075!5.52e-20!71;UBERON:0007284!5.52e-20!71;UBERON:0000033!9.53e-18!63;UBERON:0002020!1.61e-15!34;UBERON:0003056!1.88e-15!49;UBERON:0001049!5.55e-15!52;UBERON:0005068!5.55e-15!52;UBERON:0006241!5.55e-15!52;UBERON:0007135!5.55e-15!52;UBERON:0000955!1.13e-13!50;UBERON:0006238!1.13e-13!50;UBERON:0002616!5.90e-13!49;UBERON:0002791!5.94e-12!29;UBERON:0003528!5.94e-12!29;UBERON:0001893!5.94e-12!29;UBERON:0003080!6.12e-11!40;UBERON:0002780!2.36e-10!39;UBERON:0001890!2.36e-10!39;UBERON:0006240!2.36e-10!39;UBERON:0002021!1.63e-08!10;UBERON:0000411!1.63e-08!10;UBERON:0001950!1.63e-08!10;UBERON:0007811!2.20e-08!86;UBERON:0000956!8.35e-08!21;UBERON:0001869!8.35e-08!21;UBERON:0000203!8.35e-08!21;UBERON:0000153!4.42e-07!94;UBERON:0002619!6.00e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.74e-27,95;UBERON:0000924,2.74e-27,95;UBERON:0006601,2.74e-27,95;UBERON:0001017,3.70e-26,73;UBERON:0002346,3.82e-26,64;UBERON:0003075,3.82e-26,64;UBERON:0007284,3.82e-26,64;UBERON:0002020,1.10e-25,34;UBERON:0000073,2.36e-25,54;UBERON:0001016,3.20e-25,75;UBERON:0010371,7.16e-22,73;UBERON:0001049,3.57e-21,52;UBERON:0005068,3.57e-21,52;UBERON:0006241,3.57e-21,52;UBERON:0007135,3.57e-21,52;UBERON:0003056,5.60e-21,49;UBERON:0002021,9.24e-19,10;UBERON:0000411,9.24e-19,10;UBERON:0001950,9.24e-19,10;UBERON:0010314,6.61e-18,92;UBERON:0003528,8.80e-18,29;UBERON:0002791,8.80e-18,29;UBERON:0001893,8.80e-18,29;UBERON:0000955,1.90e-16,47;UBERON:0006238,1.90e-16,47;UBERON:0002616,4.56e-15,46;UBERON:0002619,8.46e-15,17;UBERON:0003080,8.88e-15,40;UBERON:0002780,1.37e-13,39;UBERON:0001890,1.37e-13,39;UBERON:0006240,1.37e-13,39;UBERON:0000956,1.45e-13,21;UBERON:0001869,1.45e-13,21;UBERON:0000203,1.45e-13,21;UBERON:0001948,1.92e-10,5;UBERON:0002315,1.92e-10,5;UBERON:0002240,1.30e-08,6;UBERON:0005174,1.30e-08,6;UBERON:0001137,1.30e-08,6;UBERON:0000025,4.54e-08,114;UBERON:0000970,1.80e-07,9;UBERON:0000019,1.80e-07,9;UBERON:0000047,1.80e-07,9;UBERON:0010312,1.80e-07,9;UBERON:0004088,1.80e-07,9;UBERON:0002104,1.80e-07,9;UBERON:0001456,1.80e-07,9;UBERON:0003072,1.80e-07,9;UBERON:0004128,1.80e-07,9;UBERON:0003071,1.80e-07,9;UBERON:0003076,3.24e-07,12;UBERON:0003057,3.24e-07,12;UBERON:0004111,4.50e-07,122 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,1.49800055259202,3.07374644257244,0.103689612308478,0.675029691658453,0.210324961351382,3.71346279724945,3.97563373712904,0.734944795289724,0.0958454710182364,0,1.10115880999389,1.65993539510744,1.22885226604995,1.45074916503213,0.548925861614458,1.56274011167028,0.837548997004143,2.25105044012672,1.22238598221448,3.83017161115768,2.84743361598206,1.3047961207771,0.075726193333184,0,3.18850937571846,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,2.04946557908083,0.41889341362691,0,0,0,0,1.9472783122627,0.915001205637253,1.88481528169297,2.25971616249959,1.53429274398198,1.87009240103604,0.973447578406546,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,1.37941262660084,1.62055916824814,0.90422890701429,2.9255694635071,3.20284300712124,2.62364828767241,3.62184719034622,0,0,0,0,0.278047249225598,0,0,0,0,0,0,1.03562886267751,1.17263029990548,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.268412837520744,3.15434922846191,1.9551876352064,0,0,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,0,0.823494773620054,0.251335208800269,0.596869416123452,0.779856348476481,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0.956728611944923,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0.252470927204373,0.631016438832513,0.780877488593277,0.215423397732799,0.477937595905104,0.891194696329576,1.41538265394416,0.404810701674894,0.876767573733936,1.18586333383957,7.39039027770156,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.813277868507395,0.756037385752609,1.46361807210128,0.436725127492355,0.269728692769641,0.661227645802687,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.469428954583016,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,5.64751842617067,3.22227665555024,5.15605962095457,3.78077001156113,2.05524755931193,3.7769694869485,1.35004500046361,2.2516060161211,1.35942722695261,1.55328093525546,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0,0.565879024158229,0.37456602987953,0.512201219238954,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705,1.64834360321323,0.588795680537589,0,0.177475806159338,0.238436189947321,0.436039249896986,0.564656282491984,0.25384382367503,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.689531376628944,0.409231043169689,0.464810523557898,0.578719832943424,1.24905288968973,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p4@4833424O15Rik | |||
}} |
Latest revision as of 12:32, 1 October 2015
Short description: | p4@4833424O15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_4833424O15Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_NM_029425, uc008rda.2, uc008rdb.2_5end |
EntrezGene: | 4833424O15Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.15e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.15e-11 | 23 |
neuron | 5.06e-09 | 33 |
neuronal stem cell | 5.06e-09 | 33 |
neuroblast | 5.06e-09 | 33 |
electrically signaling cell | 5.06e-09 | 33 |
neural cell | 2.42e-08 | 43 |
ectodermal cell | 4.59e-08 | 44 |
neurectodermal cell | 4.59e-08 | 44 |
electrically responsive cell | 4.08e-07 | 39 |
electrically active cell | 4.08e-07 | 39 |