FFCP PHASE1:Mm9::chr2:91077034..91077078,-: Difference between revisions
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{{FFCP|EntrezGene=107986|HGNC=|MCL_coexpression_id=33|UniProt=A2AGR6|association_with_transcript=0bp_to_ENSMUST00000111352,ENSMUST00000150427_5end|description=CAGE_peak_2_at_Ddb2_5end|id=chr2:91077034..91077078,-|ontology_enrichment_celltype=CL:0000838!2.67e-08!12;CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000542!1.32e-07!13;CL:0000051!1.32e-07!13;CL:0000791!8.95e-07!9;CL:0000789!8.95e-07!9;CL:0002420!8.95e-07!9;CL:0002419!8.95e-07!9;CL:0000790!8.95e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,5.02e-09,12;CL:0000084,2.41e-08,11;CL:0000827,2.41e-08,11;CL:0000542,8.15e-08,13;CL:0000051,8.15e-08,13;CL:0000791,2.44e-07,9;CL:0000789,2.44e-07,9;CL:0002420,2.44e-07,9;CL:0002419,2.44e-07,9;CL:0000790,2.44e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.21e-11!128;UBERON:0001555!2.21e-11!128;UBERON:0007026!2.21e-11!128;UBERON:0004119!2.44e-11!130;UBERON:0000925!2.44e-11!130;UBERON:0006595!2.44e-11!130;UBERON:0004921!7.23e-11!126;UBERON:0004185!7.23e-11!126;UBERON:0001004!1.90e-10!42;UBERON:0000065!5.13e-10!41;UBERON:0003408!3.26e-09!24;UBERON:0000072!8.45e-09!27;UBERON:0002370!9.08e-09!23;UBERON:0000974!9.08e-09!23;UBERON:0004807!9.08e-09!23;UBERON:0005058!9.08e-09!23;UBERON:0003351!9.08e-09!23;UBERON:0009113!9.08e-09!23;UBERON:0003295!9.08e-09!23;UBERON:0009722!9.08e-09!23;UBERON:0005562!9.08e-09!23;UBERON:0007690!9.08e-09!23;UBERON:0004177!1.35e-08!29;UBERON:0006562!1.72e-08!24;UBERON:0001557!1.72e-08!24;UBERON:0001042!1.72e-08!24;UBERON:0008814!1.72e-08!24;UBERON:0009145!1.72e-08!24;UBERON:0007023!2.37e-08!51;UBERON:0000064!6.36e-08!99;UBERON:0005409!9.51e-08!59;UBERON:0000063!1.03e-07!35;UBERON:0000077!1.79e-07!97;UBERON:0001041!7.81e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0001004,7.46e-12,42;UBERON:0000065,2.27e-11,41;UBERON:0003408,3.98e-11,24;UBERON:0002370,1.26e-10,23;UBERON:0000974,1.26e-10,23;UBERON:0004807,1.26e-10,23;UBERON:0005058,1.26e-10,23;UBERON:0003351,1.26e-10,23;UBERON:0009113,1.26e-10,23;UBERON:0003295,1.26e-10,23;UBERON:0009722,1.26e-10,23;UBERON:0005562,1.26e-10,23;UBERON:0007690,1.26e-10,23;UBERON:0000072,1.40e-10,27;UBERON:0006562,2.81e-10,24;UBERON:0001557,2.81e-10,24;UBERON:0001042,2.81e-10,24;UBERON:0008814,2.81e-10,24;UBERON:0009145,2.81e-10,24;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0001007,1.49e-09,116;UBERON:0001555,1.49e-09,116;UBERON:0007026,1.49e-09,116;UBERON:0000077,1.93e-09,35;UBERON:0004119,2.82e-09,118;UBERON:0000925,2.82e-09,118;UBERON:0006595,2.82e-09,118;UBERON:0004921,4.73e-09,114;UBERON:0007023,1.24e-08,51;UBERON:0002193,2.75e-08,48;UBERON:0002405,2.75e-08,48;UBERON:0002390,2.97e-07,45;UBERON:0003061,2.97e-07,45|phase1_expression=0.640595388419176,1.04692622291808,1.81999695755814,0.90739263392049,0,3.52546471014969,1.63528848416868,38.995243679356,10.6999428835267,11.9372908424217,3.93801326918661,3.19088635981346,34.924948905966,40.0385443079008,2.6648780945253,2.42970320867791,1.39912375625629,11.6721001182548,11.2433835556706,9.76096199135469,2.12608225377674,6.55320277925843,4.70159620450084,4.31979541542198,2.06468352960453,1.14846392823004,2.15380998079537,1.50829862880122,2.28028103347649,3.78045194639896,3.76941868114018,0,0,0,6.35473563452804,4.48833542467929,6.32925004413344,2.92972141515835,0.7813353445238,2.09409497589519,4.70585190424811,4.78131839470912,2.91306211818692,0.251793635951155,0.101376931219515,0,0.782391344348039,0,0,0.194429899074283,0.699932108126813,0,10.5703041816374,30.4652099644765,23.19047214083,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0,0.856952953211411,1.54607978666129,0.122490799214954,0.575072826109418,0,3.30347642998166,0.893811366596314,0.307213066512487,1.18697658957174,1.00636407962651,1.04182674111352,0.558365998002762,1.12552522006336,0.61119299110724,0,0.996601765593721,0.372798891650601,0.151452386666368,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.422530259330042,0,0,0,3.68034769719064,2.02687892380079,1.51657333504435,1.7127581957859,12.4290184150642,0.445326417194474,0,0,0,0,0.23517741427141,0.251333182659351,2.96633961281249,0.722996784599558,2.65383165584962,0.161766849947409,0.883366073841574,0.484875253135222,5.59175283654366,2.34224637609238,5.86450779077674,1.78819938646014,1.7972268675888,1.19980546198682,1.90605340609597,1.49790639404823,1.37250180845588,1.50785222535437,1.91206752211504,1.02286182932132,1.45451631191692,2.43361894601636,1.01839363850316,1.99051152976149,7.32895999457657,9.04899980311838,0.390361328888111,0.459804208866946,0.180062129805349,0.753524089178575,0.544291993210623,0.12811372028485,0.374806898238915,5.17406741478031,1.29340795759705,2.08016688184601,1.75951124163949,1.53437012699302,1.66828349535359,2.089512999133,1.4404749548556,1.39323986772945,1.40442637462647,1.54408744268829,0.852490498186778,0.621377317606506,0.469052119962192,0.36012412292203,0.71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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107986 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=A2AGR6 | |||
|association_with_transcript=0bp_to_ENSMUST00000111352,ENSMUST00000150427_5end | |||
|cluster_id=chr2:91077034..91077078,- | |||
|description=CAGE_peak_2_at_Ddb2_5end | |||
|id=chr2:91077034..91077078,- | |||
|ontology_enrichment_celltype=CL:0000838!2.67e-08!12;CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000542!1.32e-07!13;CL:0000051!1.32e-07!13;CL:0000791!8.95e-07!9;CL:0000789!8.95e-07!9;CL:0002420!8.95e-07!9;CL:0002419!8.95e-07!9;CL:0000790!8.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.02e-09,12;CL:0000084,2.41e-08,11;CL:0000827,2.41e-08,11;CL:0000542,8.15e-08,13;CL:0000051,8.15e-08,13;CL:0000791,2.44e-07,9;CL:0000789,2.44e-07,9;CL:0002420,2.44e-07,9;CL:0002419,2.44e-07,9;CL:0000790,2.44e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.21e-11!128;UBERON:0001555!2.21e-11!128;UBERON:0007026!2.21e-11!128;UBERON:0004119!2.44e-11!130;UBERON:0000925!2.44e-11!130;UBERON:0006595!2.44e-11!130;UBERON:0004921!7.23e-11!126;UBERON:0004185!7.23e-11!126;UBERON:0001004!1.90e-10!42;UBERON:0000065!5.13e-10!41;UBERON:0003408!3.26e-09!24;UBERON:0000072!8.45e-09!27;UBERON:0002370!9.08e-09!23;UBERON:0000974!9.08e-09!23;UBERON:0004807!9.08e-09!23;UBERON:0005058!9.08e-09!23;UBERON:0003351!9.08e-09!23;UBERON:0009113!9.08e-09!23;UBERON:0003295!9.08e-09!23;UBERON:0009722!9.08e-09!23;UBERON:0005562!9.08e-09!23;UBERON:0007690!9.08e-09!23;UBERON:0004177!1.35e-08!29;UBERON:0006562!1.72e-08!24;UBERON:0001557!1.72e-08!24;UBERON:0001042!1.72e-08!24;UBERON:0008814!1.72e-08!24;UBERON:0009145!1.72e-08!24;UBERON:0007023!2.37e-08!51;UBERON:0000064!6.36e-08!99;UBERON:0005409!9.51e-08!59;UBERON:0000063!1.03e-07!35;UBERON:0000077!1.79e-07!97;UBERON:0001041!7.81e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,7.46e-12,42;UBERON:0000065,2.27e-11,41;UBERON:0003408,3.98e-11,24;UBERON:0002370,1.26e-10,23;UBERON:0000974,1.26e-10,23;UBERON:0004807,1.26e-10,23;UBERON:0005058,1.26e-10,23;UBERON:0003351,1.26e-10,23;UBERON:0009113,1.26e-10,23;UBERON:0003295,1.26e-10,23;UBERON:0009722,1.26e-10,23;UBERON:0005562,1.26e-10,23;UBERON:0007690,1.26e-10,23;UBERON:0000072,1.40e-10,27;UBERON:0006562,2.81e-10,24;UBERON:0001557,2.81e-10,24;UBERON:0001042,2.81e-10,24;UBERON:0008814,2.81e-10,24;UBERON:0009145,2.81e-10,24;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0001007,1.49e-09,116;UBERON:0001555,1.49e-09,116;UBERON:0007026,1.49e-09,116;UBERON:0000077,1.93e-09,35;UBERON:0004119,2.82e-09,118;UBERON:0000925,2.82e-09,118;UBERON:0006595,2.82e-09,118;UBERON:0004921,4.73e-09,114;UBERON:0007023,1.24e-08,51;UBERON:0002193,2.75e-08,48;UBERON:0002405,2.75e-08,48;UBERON:0002390,2.97e-07,45;UBERON:0003061,2.97e-07,45 | |||
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| |||
|short_description=p2@Ddb2 | |||
}} |
Latest revision as of 02:54, 27 September 2015
Short description: | p2@Ddb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ddb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000111352, ENSMUST00000150427_5end |
EntrezGene: | Ddb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.02e-09 | 12 |
T cell | 2.41e-08 | 11 |
pro-T cell | 2.41e-08 | 11 |
lymphocyte | 8.15e-08 | 13 |
common lymphoid progenitor | 8.15e-08 | 13 |
mature alpha-beta T cell | 2.44e-07 | 9 |
alpha-beta T cell | 2.44e-07 | 9 |
immature T cell | 2.44e-07 | 9 |
mature T cell | 2.44e-07 | 9 |
immature alpha-beta T cell | 2.44e-07 | 9 |