FFCP PHASE1:Mm9::chr2:62250014..62250031,-: Difference between revisions
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{{FFCP|EntrezGene=13482|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=46bp_to_ENSMUST00000149306_5end|description=CAGE_peak_5_at_Dpp4_5end|id=chr2:62250014..62250031,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!8.94e-11!147;UBERON:0001041!2.20e-09!92;UBERON:0000926!5.79e-09!193;UBERON:0004120!5.79e-09!193;UBERON:0006603!5.79e-09!193;UBERON:0005057!2.25e-08!51;UBERON:0000077!5.09e-08!97;UBERON:0005911!1.41e-07!69;UBERON:0002405!1.48e-07!70;UBERON:0003104!7.15e-07!131;UBERON:0009142!7.15e-07!131;UBERON:0001007!7.17e-07!128;UBERON:0001555!7.17e-07!128;UBERON:0007026!7.17e-07!128;UBERON:0004921!9.06e-07!126;UBERON:0004185!9.06e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.60e-09,69;UBERON:0001041,3.11e-08,80;UBERON:0001048,9.17e-08,134;UBERON:0000065,1.19e-07,41;UBERON:0001004,2.77e-07,42;UBERON:0002193,2.90e-07,48;UBERON:0002405,2.90e-07,48;UBERON:0003081,4.26e-07,87;UBERON:0002390,5.66e-07,45;UBERON:0003061,5.66e-07,45;UBERON:0002370,6.08e-07,23;UBERON:0000974,6.08e-07,23;UBERON:0004807,6.08e-07,23;UBERON:0005058,6.08e-07,23;UBERON:0003351,6.08e-07,23;UBERON:0009113,6.08e-07,23;UBERON:0003295,6.08e-07,23;UBERON:0009722,6.08e-07,23;UBERON:0005562,6.08e-07,23;UBERON:0007690,6.08e-07,23;UBERON:0003929,6.32e-07,55|phase1_expression=0.640595388419176,0,0.909998478779072,0.30246421130683,0,0,0.233612640595526,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.34968160967599,0.333109761815663,1.01237633694913,2.09868563438444,5.0473946457318,3.83920414096069,1.69755860719212,0.0850432901510698,0,0,1.11994695955385,0.45881856213434,0.57423196411502,0,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,2.34895648480831,0,11.0910953717013,0,0.573066879877513,0.515672092277442,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,8.40607017234866,2.58127163094416,0,0,0,0.896053774194671,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,1.8125651855302,0.148442139064825,0.520455980298408,0,0.230615497256059,0.60289056221049,0.470354828542819,0.125666591329675,0.247194967734374,1.3013942122792,1.76922110389975,0.808834249737046,1.32504911076236,1.93950101254089,1.86391761218122,0.292780797011547,0.209446706813455,0.766371165625774,5.51149572727233,4.19931911695385,4.06624726633807,0.449371918214468,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,1.93494791315601,0.746441823660558,0,0.210441855886474,0.390361328888111,0,0.900310649026746,0.150704817835715,0.476255494059295,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,0.796137067273973,2.80885274925294,1.02939162845886,1.98914449576915,2.89976081549703,3.51789089971644,3.06105504483725,4.7348947117042,0.787056926989615,2.00547246753592,1.16266972375204,1.60964040839772,1.75148013550754,1.48103864922132,0.656669856316381,0.729619285912702,1.02339991197733,1.75640092232841,0.536825675041487,0,0.205809224758569,0,0.528901133327089,1.49301775374664,2.78684006232526,1.67527699718721,3.63030344322017,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,0.754005626400808,1.1937388322469,0.58489226135736,0,0,0.398282546508734,0.189667900953082,1.14248512609729,2.25415471346161,1.4255592949172,1.16371492300575,1.40271639780637,1.51767689098217,0.147610147979602,0.31399745568275,0.493588655687202,1.1858105083486,1.33476084572875,0.982794975566015,0.899448449539415,0.608580364165509,1.4470629585145,2.03700681425136,3.45235364940973,1.94562272130042,1.09824565275233,1.43768206527355,3.72140947668503,2.80833905803104,2.02063102357689,1.07638448113147,3.85954817090694,2.40179147216586,0.947457058852424,0.977789858652155,0.169745085775188,1.40814148973101,1.84256883185997,0.952174563544055,0.975668239288994,4.25614889086716,4.20782910332672,3.50800491046472,3.4411296090305,2.41758974612254,1.73578870297814,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.234423373184406,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0,0,1.70328102249922,2.67098405500883,3.25773918707152,0.659880491890142,1.32745138339963,2.18502572539483,0,0.754420319023592,0.295301892880773,1.22974059177571,0.775284879504663,1.45413491791002,3.20847640546249,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0.517434735131018,0.643011105094777,0.886701168211368,0.713475270408282,0.493647061806363,0.304464949114599,0,0,0.441056796109924,1.15420377059036,3.87514624070173,2.41251699712623,1.67121281604391,1.14898629821543,0,0,0.683483523191411,0.619160603889667,0.740778109478847,1.50694765603753,1.6403307326523,1.37266903923914,3.90950388985867,3.35883485576779,6.49539876880792,0,0.3163359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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13482 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENSMUST00000149306_5end | |||
|cluster_id=chr2:62250014..62250031,- | |||
|description=CAGE_peak_5_at_Dpp4_5end | |||
|id=chr2:62250014..62250031,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!8.94e-11!147;UBERON:0001041!2.20e-09!92;UBERON:0000926!5.79e-09!193;UBERON:0004120!5.79e-09!193;UBERON:0006603!5.79e-09!193;UBERON:0005057!2.25e-08!51;UBERON:0000077!5.09e-08!97;UBERON:0005911!1.41e-07!69;UBERON:0002405!1.48e-07!70;UBERON:0003104!7.15e-07!131;UBERON:0009142!7.15e-07!131;UBERON:0001007!7.17e-07!128;UBERON:0001555!7.17e-07!128;UBERON:0007026!7.17e-07!128;UBERON:0004921!9.06e-07!126;UBERON:0004185!9.06e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.60e-09,69;UBERON:0001041,3.11e-08,80;UBERON:0001048,9.17e-08,134;UBERON:0000065,1.19e-07,41;UBERON:0001004,2.77e-07,42;UBERON:0002193,2.90e-07,48;UBERON:0002405,2.90e-07,48;UBERON:0003081,4.26e-07,87;UBERON:0002390,5.66e-07,45;UBERON:0003061,5.66e-07,45;UBERON:0002370,6.08e-07,23;UBERON:0000974,6.08e-07,23;UBERON:0004807,6.08e-07,23;UBERON:0005058,6.08e-07,23;UBERON:0003351,6.08e-07,23;UBERON:0009113,6.08e-07,23;UBERON:0003295,6.08e-07,23;UBERON:0009722,6.08e-07,23;UBERON:0005562,6.08e-07,23;UBERON:0007690,6.08e-07,23;UBERON:0003929,6.32e-07,55 | |||
|phase1_expression=0.640595388419176,0,0.909998478779072,0.30246421130683,0,0,0.233612640595526,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.34968160967599,0.333109761815663,1.01237633694913,2.09868563438444,5.0473946457318,3.83920414096069,1.69755860719212,0.0850432901510698,0,0,1.11994695955385,0.45881856213434,0.57423196411502,0,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,2.34895648480831,0,11.0910953717013,0,0.573066879877513,0.515672092277442,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,8.40607017234866,2.58127163094416,0,0,0,0.896053774194671,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,1.8125651855302,0.148442139064825,0.520455980298408,0,0.230615497256059,0.60289056221049,0.470354828542819,0.125666591329675,0.247194967734374,1.3013942122792,1.76922110389975,0.808834249737046,1.32504911076236,1.93950101254089,1.86391761218122,0.292780797011547,0.209446706813455,0.766371165625774,5.51149572727233,4.19931911695385,4.06624726633807,0.449371918214468,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,1.93494791315601,0.746441823660558,0,0.210441855886474,0.390361328888111,0,0.900310649026746,0.150704817835715,0.476255494059295,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,0.796137067273973,2.80885274925294,1.02939162845886,1.98914449576915,2.89976081549703,3.51789089971644,3.06105504483725,4.7348947117042,0.787056926989615,2.00547246753592,1.16266972375204,1.60964040839772,1.75148013550754,1.48103864922132,0.656669856316381,0.729619285912702,1.02339991197733,1.75640092232841,0.536825675041487,0,0.205809224758569,0,0.528901133327089,1.49301775374664,2.78684006232526,1.67527699718721,3.63030344322017,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,0.754005626400808,1.1937388322469,0.58489226135736,0,0,0.398282546508734,0.189667900953082,1.14248512609729,2.25415471346161,1.4255592949172,1.16371492300575,1.40271639780637,1.51767689098217,0.147610147979602,0.31399745568275,0.493588655687202,1.1858105083486,1.33476084572875,0.982794975566015,0.899448449539415,0.608580364165509,1.4470629585145,2.03700681425136,3.45235364940973,1.94562272130042,1.09824565275233,1.43768206527355,3.72140947668503,2.80833905803104,2.02063102357689,1.07638448113147,3.85954817090694,2.40179147216586,0.947457058852424,0.977789858652155,0.169745085775188,1.40814148973101,1.84256883185997,0.952174563544055,0.975668239288994,4.25614889086716,4.20782910332672,3.50800491046472,3.4411296090305,2.41758974612254,1.73578870297814,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.234423373184406,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0,0,1.70328102249922,2.67098405500883,3.25773918707152,0.659880491890142,1.32745138339963,2.18502572539483,0,0.754420319023592,0.295301892880773,1.22974059177571,0.775284879504663,1.45413491791002,3.20847640546249,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0.517434735131018,0.643011105094777,0.886701168211368,0.713475270408282,0.493647061806363,0.304464949114599,0,0,0.441056796109924,1.15420377059036,3.87514624070173,2.41251699712623,1.67121281604391,1.14898629821543,0,0,0.683483523191411,0.619160603889667,0.740778109478847,1.50694765603753,1.6403307326523,1.37266903923914,3.90950388985867,3.35883485576779,6.49539876880792,0,0.316335993581135,0.813277868507395,0.86404272657441,0.836353184057875,0.218362563746178,0.539457385539283,0.826534557253359,0,0.259229946583586,0.621339313086926,0,0.598066184175915,0.496375471371293,0.388902376688095,0.387479470433193,1.01373675294467,0.58678619322877,0.5208175393758,0.104859344425711,0.241584120826006,0,7.2682557744481,6.08175645870493,12.7361586884386,12.9920822977795,11.6367352183863,9.93406773906325,10.9377859063172,7.67985541307802,8.07731599585181,12.04067545149,8.26774718122092,7.9915462206597,6.15755786498109,11.5708133159753,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.183151624267265,0,0,1.12950368523413,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0.906284817968409,0,0.207574695168353,0,0.853668028770671,0.972426868273176,0,0.367687016900028,0.888986911206461,0.824140228955577,2.24643446714271,0.505394423527595,0.25347929989024,0.754505365544305,0.936415074698824,0.640251524048693,1.14870937911227,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,1.95223386775271,0.715308569841963,0.581385666529314,1.03520318456864,1.26921911837515,1.64635175585495,1.31534855718921,1.22223702461276,1.68342681497322,0.949080144993393,0.788035859004508,0,0.464810523557898,0.964533054905707,0.499621155875892,0.935726433781634,3.22306581072447,0.956441660344217,1.54413993383661,1.39120701372253 | |||
|short_description=p5@Dpp4 | |||
}} |
Latest revision as of 20:15, 26 September 2015
Short description: | p5@Dpp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dpp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 46bp_to_ENSMUST00000149306_5end |
EntrezGene: | Dpp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.60e-09 | 69 |
foregut | 3.11e-08 | 80 |
primordium | 9.17e-08 | 134 |
respiratory tract | 1.19e-07 | 41 |
respiratory system | 2.77e-07 | 42 |
hemolymphoid system | 2.90e-07 | 48 |
immune system | 2.90e-07 | 48 |
lateral plate mesoderm | 4.26e-07 | 87 |
hematopoietic system | 5.66e-07 | 45 |
blood island | 5.66e-07 | 45 |
thymus | 6.08e-07 | 23 |
neck | 6.08e-07 | 23 |
respiratory system epithelium | 6.08e-07 | 23 |
hemolymphoid system gland | 6.08e-07 | 23 |
pharyngeal epithelium | 6.08e-07 | 23 |
thymic region | 6.08e-07 | 23 |
pharyngeal gland | 6.08e-07 | 23 |
entire pharyngeal arch endoderm | 6.08e-07 | 23 |
thymus primordium | 6.08e-07 | 23 |
early pharyngeal endoderm | 6.08e-07 | 23 |
gut epithelium | 6.32e-07 | 55 |