FFCP PHASE1:Mm9::chr2:57090838..57090870,+: Difference between revisions
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{{FFCP|EntrezGene=14571|HGNC=|MCL_coexpression_id=12|UniProt=Q64521|association_with_transcript=45bp_to_ENSMUST00000028167,NM_010274,uc008jsc.2_5end|description=CAGE_peak_1_at_Gpd2_5end|id=chr2:57090838..57090870,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.11e-14!130;UBERON:0000925!1.11e-14!130;UBERON:0006595!1.11e-14!130;UBERON:0001007!5.74e-14!128;UBERON:0001555!5.74e-14!128;UBERON:0007026!5.74e-14!128;UBERON:0004921!5.12e-13!126;UBERON:0004185!5.12e-13!126;UBERON:0005409!3.48e-10!59;UBERON:0000344!1.16e-08!15;UBERON:0000160!1.23e-08!43;UBERON:0004923!9.87e-08!24;UBERON:0001242!1.40e-07!13;UBERON:0000060!1.40e-07!13;UBERON:0001262!1.40e-07!13;UBERON:0004786!1.40e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.78e-16,118;UBERON:0000925,7.78e-16,118;UBERON:0006595,7.78e-16,118;UBERON:0001007,4.25e-15,116;UBERON:0001555,4.25e-15,116;UBERON:0007026,4.25e-15,116;UBERON:0004921,4.18e-14,114;UBERON:0005409,1.50e-12,47;UBERON:0000160,1.15e-11,31;UBERON:0000344,1.16e-08,15;UBERON:0004923,9.87e-08,24;UBERON:0001242,1.40e-07,13;UBERON:0001262,1.40e-07,13;UBERON:0004786,1.40e-07,13|phase1_expression=3.36312578920067,44.6688521778382,42.7699285026164,65.6347338535821,55.5994260240445,16.6200479192771,18.221785966451,10.5881125222093,21.11830832275,23.8745816848433,8.38968044304974,8.45584885350566,17.6336751829142,18.5331253128274,11.6588416635482,13.3633676477285,4.89693314689703,31.861678701182,37.0208970735495,25.0389894560838,7.313722952992,9.73051321768676,12.5375898786689,35.8383027057231,40.8348520299563,33.3054539186712,27.5687677541808,32.3206849028834,48.4559719613753,45.8694836163074,27.4945833212578,10.7955214488137,11.6862309641068,47.5445043046316,14.4425809875637,22.7741464141135,18.5794114198756,50.6423273191658,37.5040965371424,56.0170406051964,59.4113802911324,53.2775478267588,50.49307671524,11.4566104357775,9.22530074097583,8.81024410376071,3.9119567217402,9.59310688073965,10.3252505885202,16.7209713203884,12.5987779462826,10.062679505548,40.100042847799,19.5847778343063,13.4437519656986,7.46052364504246,9.45560351797897,5.67239301505187,1.01158230429799,1.05798195854407,0,8.13226876965917,4.4464739805557,2.2497492932035,3.9554654502679,1.4209602298922,1.79760066311043,3.84218305321555,2.90330914463737,2.16009501330705,1.68259969081106,3.14216082844184,1.54607978666129,1.34739879136449,1.34183659425531,1.83843757322004,11.0115880999389,9.44886301830389,10.1380311949121,0.791317726381163,0.731901148819277,0.52091337055676,8.37548997004143,7.87867654044352,7.79271063661732,1.76777151284201,2.42031857358475,0.931997229126503,15.7510482133023,18.3638891059489,14.4932244350839,10.3250865237766,9.51959867190851,9.71465744948071,9.74664626171504,10.3046184032387,17.4151080963372,13.2935651610885,8.57293815189467,10.9535268098205,7.04217098883402,15.3991772897181,5.09610479413291,7.11066703153331,12.3399893376392,13.1747130047051,18.1988800205322,21.6949371466214,36.7691794778984,5.19547486726887,2.25530924795977,1.52232739156071,2.99800146432876,4.22023393547343,3.88042733547826,18.8499886994513,5.19109432242185,105.991328622295,22.1152637987469,8.7354098971601,16.1214308476087,16.9706338597328,29.8226817948995,13.1751358655196,10.0534419270458,67.6961196302767,12.8202183221335,7.7987355029143,14.6130761134024,10.3355541189328,8.6925114535539,2.1361239859187,8.34356736922927,5.8814555185976,7.06479351502504,9.73447578406546,3.25885964321012,13.0627319140598,6.06534620240819,29.6723016799928,3.3831315170303,3.67843367093557,1.0803727788321,1.9591626318643,2.31324097114515,3.20284300712124,2.24884138943349,14.7460921321239,5.6047678162539,2.83659120251729,1.23165786914764,2.41115305670332,3.05851974148158,3.48252166522167,3.08673204611915,1.79130840136644,7.72434506044558,8.4924809347856,9.09323198065896,4.76389276831654,5.39409937956521,5.40186184383045,3.07768156260773,3.54175617145327,2.00547246753592,5.11574678450897,4.56064782379353,4.67061369468678,6.08871444679878,10.9992200932994,10.701082860053,9.64919917007193,11.6361561104257,9.5286557319864,6.51898840548794,1.9551876352064,100.447310027075,45.4854974661296,4.47905326123991,4.41249676534833,7.98978260196979,12.9077455758939,13.5650606745371,11.6037631928661,47.4529061544512,25.3636390274977,20.1068167040216,20.2935601481974,16.9618755793635,58.4232615625244,46.685818772934,50.7810246798636,4.1726938209678,4.34144347916969,10.1436962105772,4.88763186828754,5.62462212786115,5.96154469067708,7.58838445491087,11.3659813944294,17.7408562460754,16.4118228015995,11.858105083486,8.3422552858047,6.2898878436225,6.2961391467759,6.28866376304359,5.788251834058,5.0925170356284,4.60313819921297,13.619359049103,16.1991233780968,20.1275489138296,23.4448797031157,22.1546747911338,20.4588891137161,18.8367284198008,14.473305640901,16.812540305161,2.27389694124582,3.58522948172457,4.92260748748046,5.86725620721255,6.86775655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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14571 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q64521 | |||
|association_with_transcript=45bp_to_ENSMUST00000028167,NM_010274,uc008jsc.2_5end | |||
|cluster_id=chr2:57090838..57090870,+ | |||
|description=CAGE_peak_1_at_Gpd2_5end | |||
|id=chr2:57090838..57090870,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-14!130;UBERON:0000925!1.11e-14!130;UBERON:0006595!1.11e-14!130;UBERON:0001007!5.74e-14!128;UBERON:0001555!5.74e-14!128;UBERON:0007026!5.74e-14!128;UBERON:0004921!5.12e-13!126;UBERON:0004185!5.12e-13!126;UBERON:0005409!3.48e-10!59;UBERON:0000344!1.16e-08!15;UBERON:0000160!1.23e-08!43;UBERON:0004923!9.87e-08!24;UBERON:0001242!1.40e-07!13;UBERON:0000060!1.40e-07!13;UBERON:0001262!1.40e-07!13;UBERON:0004786!1.40e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.78e-16,118;UBERON:0000925,7.78e-16,118;UBERON:0006595,7.78e-16,118;UBERON:0001007,4.25e-15,116;UBERON:0001555,4.25e-15,116;UBERON:0007026,4.25e-15,116;UBERON:0004921,4.18e-14,114;UBERON:0005409,1.50e-12,47;UBERON:0000160,1.15e-11,31;UBERON:0000344,1.16e-08,15;UBERON:0004923,9.87e-08,24;UBERON:0001242,1.40e-07,13;UBERON:0001262,1.40e-07,13;UBERON:0004786,1.40e-07,13 | |||
|phase1_expression=3.36312578920067,44.6688521778382,42.7699285026164,65.6347338535821,55.5994260240445,16.6200479192771,18.221785966451,10.5881125222093,21.11830832275,23.8745816848433,8.38968044304974,8.45584885350566,17.6336751829142,18.5331253128274,11.6588416635482,13.3633676477285,4.89693314689703,31.861678701182,37.0208970735495,25.0389894560838,7.313722952992,9.73051321768676,12.5375898786689,35.8383027057231,40.8348520299563,33.3054539186712,27.5687677541808,32.3206849028834,48.4559719613753,45.8694836163074,27.4945833212578,10.7955214488137,11.6862309641068,47.5445043046316,14.4425809875637,22.7741464141135,18.5794114198756,50.6423273191658,37.5040965371424,56.0170406051964,59.4113802911324,53.2775478267588,50.49307671524,11.4566104357775,9.22530074097583,8.81024410376071,3.9119567217402,9.59310688073965,10.3252505885202,16.7209713203884,12.5987779462826,10.062679505548,40.100042847799,19.5847778343063,13.4437519656986,7.46052364504246,9.45560351797897,5.67239301505187,1.01158230429799,1.05798195854407,0,8.13226876965917,4.4464739805557,2.2497492932035,3.9554654502679,1.4209602298922,1.79760066311043,3.84218305321555,2.90330914463737,2.16009501330705,1.68259969081106,3.14216082844184,1.54607978666129,1.34739879136449,1.34183659425531,1.83843757322004,11.0115880999389,9.44886301830389,10.1380311949121,0.791317726381163,0.731901148819277,0.52091337055676,8.37548997004143,7.87867654044352,7.79271063661732,1.76777151284201,2.42031857358475,0.931997229126503,15.7510482133023,18.3638891059489,14.4932244350839,10.3250865237766,9.51959867190851,9.71465744948071,9.74664626171504,10.3046184032387,17.4151080963372,13.2935651610885,8.57293815189467,10.9535268098205,7.04217098883402,15.3991772897181,5.09610479413291,7.11066703153331,12.3399893376392,13.1747130047051,18.1988800205322,21.6949371466214,36.7691794778984,5.19547486726887,2.25530924795977,1.52232739156071,2.99800146432876,4.22023393547343,3.88042733547826,18.8499886994513,5.19109432242185,105.991328622295,22.1152637987469,8.7354098971601,16.1214308476087,16.9706338597328,29.8226817948995,13.1751358655196,10.0534419270458,67.6961196302767,12.8202183221335,7.7987355029143,14.6130761134024,10.3355541189328,8.6925114535539,2.1361239859187,8.34356736922927,5.8814555185976,7.06479351502504,9.73447578406546,3.25885964321012,13.0627319140598,6.06534620240819,29.6723016799928,3.3831315170303,3.67843367093557,1.0803727788321,1.9591626318643,2.31324097114515,3.20284300712124,2.24884138943349,14.7460921321239,5.6047678162539,2.83659120251729,1.23165786914764,2.41115305670332,3.05851974148158,3.48252166522167,3.08673204611915,1.79130840136644,7.72434506044558,8.4924809347856,9.09323198065896,4.76389276831654,5.39409937956521,5.40186184383045,3.07768156260773,3.54175617145327,2.00547246753592,5.11574678450897,4.56064782379353,4.67061369468678,6.08871444679878,10.9992200932994,10.701082860053,9.64919917007193,11.6361561104257,9.5286557319864,6.51898840548794,1.9551876352064,100.447310027075,45.4854974661296,4.47905326123991,4.41249676534833,7.98978260196979,12.9077455758939,13.5650606745371,11.6037631928661,47.4529061544512,25.3636390274977,20.1068167040216,20.2935601481974,16.9618755793635,58.4232615625244,46.685818772934,50.7810246798636,4.1726938209678,4.34144347916969,10.1436962105772,4.88763186828754,5.62462212786115,5.96154469067708,7.58838445491087,11.3659813944294,17.7408562460754,16.4118228015995,11.858105083486,8.3422552858047,6.2898878436225,6.2961391467759,6.28866376304359,5.788251834058,5.0925170356284,4.60313819921297,13.619359049103,16.1991233780968,20.1275489138296,23.4448797031157,22.1546747911338,20.4588891137161,18.8367284198008,14.473305640901,16.812540305161,2.27389694124582,3.58522948172457,4.92260748748046,5.86725620721255,6.86775655511445,5.71304738126433,8.78101415360095,10.4039195110086,10.6303051031412,9.24837658213425,19.6635977658886,17.2684981865896,12.150520920847,6.03165135757089,15.2293591469239,8.35999264132362,10.7615331058846,19.4266213885228,15.9407893765396,5.57378814280696,57.3109004753927,1.89304931649754,3.90438744296638,4.73931475012158,5.01834475700359,6.46116154838943,7.64306633129848,8.09621403349789,5.26060544240361,5.13874111330481,8.03303291054518,6.38730383437209,2.84904965867608,3.4206261464251,5.77395430403874,3.98235415019888,6.06951590387454,8.76738315197778,7.54420319023592,7.08724542913855,7.07100840271033,12.1461297789064,7.99774204850512,9.9819265947722,11.3773232856894,7.37930260024991,16.5016869197099,6.80879211507576,3.96134406868882,4.39819524861365,4.92975180572662,7.62563004661776,2.85390108163313,6.41741180348272,3.65357938937519,15.0189893160775,23.9370240076117,9.2621927183084,13.0260139823769,7.75029248140347,6.57410881716899,4.65552141612232,5.9090723908222,42.8476829845881,14.4631735568198,18.1123133645724,6.3979929068599,4.8150577116125,11.8672127912955,18.8638034255015,11.4389086603261,21.0773253192381,22.112329467138,24.5995953371874,33.413471630529,4.11236791655476,7.1161813494397,9.396464651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| |||
|short_description=p1@Gpd2 | |||
}} |
Latest revision as of 19:01, 26 September 2015
Short description: | p1@Gpd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 45bp_to_ENSMUST00000028167, NM_010274, uc008jsc.2_5end |
EntrezGene: | Gpd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.78e-16 | 118 |
endoderm | 7.78e-16 | 118 |
presumptive endoderm | 7.78e-16 | 118 |
digestive system | 4.25e-15 | 116 |
digestive tract | 4.25e-15 | 116 |
primitive gut | 4.25e-15 | 116 |
subdivision of digestive tract | 4.18e-14 | 114 |
gastrointestinal system | 1.50e-12 | 47 |
intestine | 1.15e-11 | 31 |
mucosa | 1.16e-08 | 15 |
organ component layer | 9.87e-08 | 24 |
intestinal mucosa | 1.40e-07 | 13 |
wall of intestine | 1.40e-07 | 13 |
gastrointestinal system mucosa | 1.40e-07 | 13 |