FFCP PHASE1:Mm9::chr2:4073634..4073656,+: Difference between revisions
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{{FFCP|EntrezGene=209630|HGNC=|MCL_coexpression_id=1169|UniProt=Q8BIE6|association_with_transcript=-252bp_to_NM_172475,uc008ien.2,uc008ieo.2_5end|description=CAGE_peak_32_at_Frmd4a_5end|id=chr2:4073634..4073656,+|ontology_enrichment_celltype=CL:0000117!3.63e-11!23;CL:0000337!3.63e-11!23;CL:0000540!1.44e-07!33;CL:0000047!1.44e-07!33;CL:0000031!1.44e-07!33;CL:0000404!1.44e-07!33;CL:0002609!3.05e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,7.15e-31,23;CL:0000337,7.15e-31,23;CL:0002609,2.80e-25,6;CL:0000540,6.65e-21,33;CL:0000047,6.65e-21,33;CL:0000031,6.65e-21,33;CL:0000404,6.65e-21,33;CL:0000393,2.27e-17,39;CL:0000211,2.27e-17,39;CL:0002319,1.47e-15,43;CL:0000221,3.70e-15,44;CL:0000133,3.70e-15,44;CL:0002613,8.53e-15,3;CL:0000120,1.05e-14,3;CL:0002608,1.01e-13,3;CL:0002321,9.83e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.69e-13!71;UBERON:0003075!7.69e-13!71;UBERON:0007284!7.69e-13!71;UBERON:0003056!1.62e-12!49;UBERON:0001049!6.11e-11!52;UBERON:0005068!6.11e-11!52;UBERON:0006241!6.11e-11!52;UBERON:0007135!6.11e-11!52;UBERON:0000033!4.16e-10!63;UBERON:0004121!2.31e-09!102;UBERON:0000924!2.31e-09!102;UBERON:0006601!2.31e-09!102;UBERON:0002020!4.30e-09!34;UBERON:0001017!1.62e-08!73;UBERON:0005743!1.62e-08!73;UBERON:0002780!4.27e-08!39;UBERON:0001890!4.27e-08!39;UBERON:0006240!4.27e-08!39;UBERON:0000073!5.36e-08!75;UBERON:0001016!5.36e-08!75;UBERON:0003080!1.03e-07!40;UBERON:0007811!2.70e-07!86;UBERON:0000153!3.36e-07!94;UBERON:0000970!5.24e-07!9;UBERON:0000019!5.24e-07!9;UBERON:0000047!5.24e-07!9;UBERON:0004088!5.24e-07!9;UBERON:0002104!5.24e-07!9;UBERON:0001456!5.24e-07!9;UBERON:0003072!5.24e-07!9;UBERON:0003071!5.24e-07!9;UBERON:0004128!5.24e-07!9;UBERON:0002616!9.90e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.77e-18,49;UBERON:0002020,5.37e-17,34;UBERON:0003528,6.21e-17,29;UBERON:0002791,6.21e-17,29;UBERON:0001893,6.21e-17,29;UBERON:0002346,2.27e-15,64;UBERON:0003075,2.27e-15,64;UBERON:0007284,2.27e-15,64;UBERON:0000369,4.36e-15,5;UBERON:0002435,4.36e-15,5;UBERON:0000204,4.36e-15,5;UBERON:0010082,4.36e-15,5;UBERON:0004121,2.10e-14,95;UBERON:0000924,2.10e-14,95;UBERON:0006601,2.10e-14,95;UBERON:0010371,3.69e-13,73;UBERON:0002780,3.74e-12,39;UBERON:0001890,3.74e-12,39;UBERON:0006240,3.74e-12,39;UBERON:0003080,8.32e-12,40;UBERON:0001017,1.69e-11,73;UBERON:0001016,3.99e-11,75;UBERON:0001954,1.60e-10,7;UBERON:0003022,1.60e-10,7;UBERON:0002421,1.60e-10,7;UBERON:0000349,1.60e-10,7;UBERON:0002600,1.60e-10,7;UBERON:0001049,1.90e-10,52;UBERON:0005068,1.90e-10,52;UBERON:0006241,1.90e-10,52;UBERON:0007135,1.90e-10,52;UBERON:0002616,4.85e-10,46;UBERON:0000073,5.47e-10,54;UBERON:0010314,6.68e-10,92;UBERON:0000955,8.64e-10,47;UBERON:0006238,8.64e-10,47;UBERON:0000956,1.71e-09,21;UBERON:0001869,1.71e-09,21;UBERON:0000203,1.71e-09,21;UBERON:0002420,1.74e-09,8;UBERON:0007245,1.74e-09,8;UBERON:0010009,1.74e-09,8;UBERON:0010011,1.74e-09,8;UBERON:0000454,1.74e-09,8;UBERON:0000970,3.55e-08,9;UBERON:0000019,3.55e-08,9;UBERON:0000047,3.55e-08,9;UBERON:0010312,3.55e-08,9;UBERON:0004088,3.55e-08,9;UBERON:0002104,3.55e-08,9;UBERON:0001456,3.55e-08,9;UBERON:0003072,3.55e-08,9;UBERON:0004128,3.55e-08,9;UBERON:0003071,3.55e-08,9|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,1.14058573539325,1.21505344498522,1.26194976810829,0.285650984403804,0.883474163806454,1.46988959057945,1.0543001812006,2.75765635983006,0,0,0,3.42904348098504,2.8361169516747,2.6045668527838,0,0,0,0.589257170947335,0.854230084794618,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,1.7591609295801,0,0.255715457330331,0.41557608911912,0.486723789203273,0.509196819251581,0,0,0,0.780722657776222,0.919608417733892,0.180062129805349,0.753524089178575,2.17716797284249,2.3060469651273,2.62364828767241,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,7.9236551532049,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.468207537349412,0.192075457214608,0.287177344778066,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.953744759789284,0.581385666529314,0.658765662907314,0.423073039458382,0,1.05227884575137,0.135804113845862,0,0.593175090620871,0.29551344712669,0,0,0,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0,0|short_description=p32@Frmd4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=209630 | |||
|HGNC= | |||
|MCL_coexpression_id=1169 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BIE6 | |||
|association_with_transcript=-252bp_to_NM_172475,uc008ien.2,uc008ieo.2_5end | |||
|cluster_id=chr2:4073634..4073656,+ | |||
|description=CAGE_peak_32_at_Frmd4a_5end | |||
|id=chr2:4073634..4073656,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.63e-11!23;CL:0000337!3.63e-11!23;CL:0000540!1.44e-07!33;CL:0000047!1.44e-07!33;CL:0000031!1.44e-07!33;CL:0000404!1.44e-07!33;CL:0002609!3.05e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.15e-31,23;CL:0000337,7.15e-31,23;CL:0002609,2.80e-25,6;CL:0000540,6.65e-21,33;CL:0000047,6.65e-21,33;CL:0000031,6.65e-21,33;CL:0000404,6.65e-21,33;CL:0000393,2.27e-17,39;CL:0000211,2.27e-17,39;CL:0002319,1.47e-15,43;CL:0000221,3.70e-15,44;CL:0000133,3.70e-15,44;CL:0002613,8.53e-15,3;CL:0000120,1.05e-14,3;CL:0002608,1.01e-13,3;CL:0002321,9.83e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.69e-13!71;UBERON:0003075!7.69e-13!71;UBERON:0007284!7.69e-13!71;UBERON:0003056!1.62e-12!49;UBERON:0001049!6.11e-11!52;UBERON:0005068!6.11e-11!52;UBERON:0006241!6.11e-11!52;UBERON:0007135!6.11e-11!52;UBERON:0000033!4.16e-10!63;UBERON:0004121!2.31e-09!102;UBERON:0000924!2.31e-09!102;UBERON:0006601!2.31e-09!102;UBERON:0002020!4.30e-09!34;UBERON:0001017!1.62e-08!73;UBERON:0005743!1.62e-08!73;UBERON:0002780!4.27e-08!39;UBERON:0001890!4.27e-08!39;UBERON:0006240!4.27e-08!39;UBERON:0000073!5.36e-08!75;UBERON:0001016!5.36e-08!75;UBERON:0003080!1.03e-07!40;UBERON:0007811!2.70e-07!86;UBERON:0000153!3.36e-07!94;UBERON:0000970!5.24e-07!9;UBERON:0000019!5.24e-07!9;UBERON:0000047!5.24e-07!9;UBERON:0004088!5.24e-07!9;UBERON:0002104!5.24e-07!9;UBERON:0001456!5.24e-07!9;UBERON:0003072!5.24e-07!9;UBERON:0003071!5.24e-07!9;UBERON:0004128!5.24e-07!9;UBERON:0002616!9.90e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.77e-18,49;UBERON:0002020,5.37e-17,34;UBERON:0003528,6.21e-17,29;UBERON:0002791,6.21e-17,29;UBERON:0001893,6.21e-17,29;UBERON:0002346,2.27e-15,64;UBERON:0003075,2.27e-15,64;UBERON:0007284,2.27e-15,64;UBERON:0000369,4.36e-15,5;UBERON:0002435,4.36e-15,5;UBERON:0000204,4.36e-15,5;UBERON:0010082,4.36e-15,5;UBERON:0004121,2.10e-14,95;UBERON:0000924,2.10e-14,95;UBERON:0006601,2.10e-14,95;UBERON:0010371,3.69e-13,73;UBERON:0002780,3.74e-12,39;UBERON:0001890,3.74e-12,39;UBERON:0006240,3.74e-12,39;UBERON:0003080,8.32e-12,40;UBERON:0001017,1.69e-11,73;UBERON:0001016,3.99e-11,75;UBERON:0001954,1.60e-10,7;UBERON:0003022,1.60e-10,7;UBERON:0002421,1.60e-10,7;UBERON:0000349,1.60e-10,7;UBERON:0002600,1.60e-10,7;UBERON:0001049,1.90e-10,52;UBERON:0005068,1.90e-10,52;UBERON:0006241,1.90e-10,52;UBERON:0007135,1.90e-10,52;UBERON:0002616,4.85e-10,46;UBERON:0000073,5.47e-10,54;UBERON:0010314,6.68e-10,92;UBERON:0000955,8.64e-10,47;UBERON:0006238,8.64e-10,47;UBERON:0000956,1.71e-09,21;UBERON:0001869,1.71e-09,21;UBERON:0000203,1.71e-09,21;UBERON:0002420,1.74e-09,8;UBERON:0007245,1.74e-09,8;UBERON:0010009,1.74e-09,8;UBERON:0010011,1.74e-09,8;UBERON:0000454,1.74e-09,8;UBERON:0000970,3.55e-08,9;UBERON:0000019,3.55e-08,9;UBERON:0000047,3.55e-08,9;UBERON:0010312,3.55e-08,9;UBERON:0004088,3.55e-08,9;UBERON:0002104,3.55e-08,9;UBERON:0001456,3.55e-08,9;UBERON:0003072,3.55e-08,9;UBERON:0004128,3.55e-08,9;UBERON:0003071,3.55e-08,9 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,1.14058573539325,1.21505344498522,1.26194976810829,0.285650984403804,0.883474163806454,1.46988959057945,1.0543001812006,2.75765635983006,0,0,0,3.42904348098504,2.8361169516747,2.6045668527838,0,0,0,0.589257170947335,0.854230084794618,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,1.7591609295801,0,0.255715457330331,0.41557608911912,0.486723789203273,0.509196819251581,0,0,0,0.780722657776222,0.919608417733892,0.180062129805349,0.753524089178575,2.17716797284249,2.3060469651273,2.62364828767241,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,7.9236551532049,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.468207537349412,0.192075457214608,0.287177344778066,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.953744759789284,0.581385666529314,0.658765662907314,0.423073039458382,0,1.05227884575137,0.135804113845862,0,0.593175090620871,0.29551344712669,0,0,0,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p32@Frmd4a | |||
}} |
Latest revision as of 17:00, 26 September 2015
Short description: | p32@Frmd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_32_at_Frmd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1169 |
Association with transcript: | -252bp_to_NM_172475, uc008ien.2, uc008ieo.2_5end |
EntrezGene: | Frmd4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.15e-31 | 23 |
neuroblast (sensu Vertebrata) | 7.15e-31 | 23 |
neuron of cerebral cortex | 2.80e-25 | 6 |
neuron | 6.65e-21 | 33 |
neuronal stem cell | 6.65e-21 | 33 |
neuroblast | 6.65e-21 | 33 |
electrically signaling cell | 6.65e-21 | 33 |
electrically responsive cell | 2.27e-17 | 39 |
electrically active cell | 2.27e-17 | 39 |
neural cell | 1.47e-15 | 43 |
ectodermal cell | 3.70e-15 | 44 |
neurectodermal cell | 3.70e-15 | 44 |
striatum neuron | 8.53e-15 | 3 |
granule cell | 1.05e-14 | 3 |
hippocampal neuron | 1.01e-13 | 3 |
embryonic cell | 9.83e-09 | 70 |