FFCP PHASE1:Mm9::chr2:28771380..28771413,-: Difference between revisions
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{{FFCP|EntrezGene=54422|HGNC=|MCL_coexpression_id=224|UniProt=G3UYK3|association_with_transcript=-355bp_to_ENSMUST00000174027_5end|description=CAGE_peak_2_at_Barhl1_5end|id=chr2:28771380..28771413,-|ontology_enrichment_celltype=CL:0000117!1.02e-18!23;CL:0000337!1.02e-18!23;CL:0000540!3.74e-13!33;CL:0000047!3.74e-13!33;CL:0000031!3.74e-13!33;CL:0000404!3.74e-13!33;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000221!8.77e-10!44;CL:0000133!8.77e-10!44;CL:0002319!7.62e-09!43;CL:0000055!6.68e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-23,23;CL:0000337,1.93e-23,23;CL:0000540,4.44e-19,33;CL:0000047,4.44e-19,33;CL:0000031,4.44e-19,33;CL:0000404,4.44e-19,33;CL:0000221,1.94e-16,44;CL:0000133,1.94e-16,44;CL:0000393,7.34e-16,39;CL:0000211,7.34e-16,39;CL:0000120,7.90e-16,3;CL:0002613,6.38e-15,3;CL:0002319,3.27e-14,43;CL:0000197,6.66e-11,2;CL:0002491,6.66e-11,2;CL:0000098,6.66e-11,2;CL:0002321,1.45e-09,70;CL:0002614,4.17e-07,3;CL:0002612,6.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.05e-12!73;UBERON:0005743!1.05e-12!73;UBERON:0000073!3.91e-12!75;UBERON:0001016!3.91e-12!75;UBERON:0003076!1.86e-11!12;UBERON:0003057!1.86e-11!12;UBERON:0001049!6.41e-11!52;UBERON:0005068!6.41e-11!52;UBERON:0006241!6.41e-11!52;UBERON:0007135!6.41e-11!52;UBERON:0002298!3.68e-10!6;UBERON:0002240!1.13e-08!6;UBERON:0005174!1.13e-08!6;UBERON:0001137!1.13e-08!6;UBERON:0002616!1.75e-08!49;UBERON:0000955!3.34e-08!50;UBERON:0006238!3.34e-08!50;UBERON:0001948!1.18e-07!5;UBERON:0002315!1.18e-07!5;UBERON:0004121!1.56e-07!102;UBERON:0000924!1.56e-07!102;UBERON:0006601!1.56e-07!102;UBERON:0002420!1.78e-07!8;UBERON:0007245!1.78e-07!8;UBERON:0010009!1.78e-07!8;UBERON:0010011!1.78e-07!8;UBERON:0000454!1.78e-07!8;UBERON:0002950!2.20e-07!4;UBERON:0001891!2.20e-07!4;UBERON:0009616!2.20e-07!4;UBERON:0000033!3.52e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-16,73;UBERON:0001016,9.83e-16,75;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0004121,1.26e-13,95;UBERON:0000924,1.26e-13,95;UBERON:0006601,1.26e-13,95;UBERON:0003076,5.72e-13,12;UBERON:0003057,5.72e-13,12;UBERON:0000073,1.98e-12,54;UBERON:0004733,4.74e-12,6;UBERON:0004732,4.74e-12,6;UBERON:0002028,4.74e-12,6;UBERON:0007277,4.74e-12,6;UBERON:0002950,2.94e-11,4;UBERON:0001891,2.94e-11,4;UBERON:0009616,2.94e-11,4;UBERON:0010286,2.94e-11,4;UBERON:0001049,6.51e-11,52;UBERON:0005068,6.51e-11,52;UBERON:0006241,6.51e-11,52;UBERON:0007135,6.51e-11,52;UBERON:0004766,6.66e-11,2;UBERON:0008193,6.66e-11,2;UBERON:0005913,6.66e-11,2;UBERON:0011158,6.66e-11,2;UBERON:0005744,6.66e-11,2;UBERON:0003457,6.66e-11,2;UBERON:0008001,6.66e-11,2;UBERON:0007497,6.66e-11,2;UBERON:0009955,6.66e-11,2;UBERON:0003067,6.66e-11,2;UBERON:0002546,6.66e-11,2;UBERON:0007914,6.66e-11,2;UBERON:0005253,6.66e-11,2;UBERON:0002227,6.66e-11,2;UBERON:0001846,6.66e-11,2;UBERON:0004339,6.66e-11,2;UBERON:0002105,6.66e-11,2;UBERON:0001678,6.66e-11,2;UBERON:0003128,6.66e-11,2;UBERON:0001694,6.66e-11,2;UBERON:0004681,6.66e-11,2;UBERON:0001839,6.66e-11,2;UBERON:0001690,6.66e-11,2;UBERON:0001844,6.66e-11,2;UBERON:0001849,6.66e-11,2;UBERON:0002499,6.66e-11,2;UBERON:0001855,6.66e-11,2;UBERON:0011137,6.66e-11,2;UBERON:0001703,6.66e-11,2;UBERON:0010323,6.66e-11,2;UBERON:0003129,6.66e-11,2;UBERON:0003069,6.66e-11,2;UBERON:0003051,6.66e-11,2;UBERON:0004637,6.66e-11,2;UBERON:0004761,6.66e-11,2;UBERON:0010113,6.66e-11,2;UBERON:0009123,6.66e-11,2;UBERON:0010351,6.66e-11,2;UBERON:0009617,6.66e-11,2;UBERON:0005641,6.66e-11,2;UBERON:0010349,6.66e-11,2;UBERON:0010371,2.46e-10,73;UBERON:0001896,8.81e-10,2;UBERON:0002298,8.81e-10,2;UBERON:0005290,8.81e-10,2;UBERON:0010096,8.81e-10,2;UBERON:0000369,3.68e-09,5;UBERON:0002435,3.68e-09,5;UBERON:0000204,3.68e-09,5;UBERON:0010082,3.68e-09,5;UBERON:0002616,1.31e-08,46;UBERON:0002346,1.62e-08,64;UBERON:0003075,1.62e-08,64;UBERON:0007284,1.62e-08,64;UBERON:0000955,2.14e-08,47;UBERON:0006238,2.14e-08,47;UBERON:0010314,9.76e-08,92;UBERON:0002038,4.17e-07,3;UBERON:0009663,4.17e-07,3;UBERON:0009661,4.17e-07,3;UBERON:0000125,4.17e-07,3;UBERON:0002308,4.17e-07,3;UBERON:0002257,6.35e-07,3|phase1_expression=13.1322054625931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7575193384526,28.5655128806898,12.6766280701236,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0,2.20231761998777,0.383062014255563,0.153606533256243,5.27545150920775,4.20843160571084,2.08365348222704,0.837548997004143,2.8138130501584,1.98637722109853,1.47314292736834,0.284743361598206,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,6.05626705039726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.04723353406728,0,0,0,0,7.33974133083631,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54422 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=G3UYK3 | |||
|association_with_transcript=-355bp_to_ENSMUST00000174027_5end | |||
|cluster_id=chr2:28771380..28771413,- | |||
|description=CAGE_peak_2_at_Barhl1_5end | |||
|id=chr2:28771380..28771413,- | |||
|ontology_enrichment_celltype=CL:0000117!1.02e-18!23;CL:0000337!1.02e-18!23;CL:0000540!3.74e-13!33;CL:0000047!3.74e-13!33;CL:0000031!3.74e-13!33;CL:0000404!3.74e-13!33;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000221!8.77e-10!44;CL:0000133!8.77e-10!44;CL:0002319!7.62e-09!43;CL:0000055!6.68e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-23,23;CL:0000337,1.93e-23,23;CL:0000540,4.44e-19,33;CL:0000047,4.44e-19,33;CL:0000031,4.44e-19,33;CL:0000404,4.44e-19,33;CL:0000221,1.94e-16,44;CL:0000133,1.94e-16,44;CL:0000393,7.34e-16,39;CL:0000211,7.34e-16,39;CL:0000120,7.90e-16,3;CL:0002613,6.38e-15,3;CL:0002319,3.27e-14,43;CL:0000197,6.66e-11,2;CL:0002491,6.66e-11,2;CL:0000098,6.66e-11,2;CL:0002321,1.45e-09,70;CL:0002614,4.17e-07,3;CL:0002612,6.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-12!73;UBERON:0005743!1.05e-12!73;UBERON:0000073!3.91e-12!75;UBERON:0001016!3.91e-12!75;UBERON:0003076!1.86e-11!12;UBERON:0003057!1.86e-11!12;UBERON:0001049!6.41e-11!52;UBERON:0005068!6.41e-11!52;UBERON:0006241!6.41e-11!52;UBERON:0007135!6.41e-11!52;UBERON:0002298!3.68e-10!6;UBERON:0002240!1.13e-08!6;UBERON:0005174!1.13e-08!6;UBERON:0001137!1.13e-08!6;UBERON:0002616!1.75e-08!49;UBERON:0000955!3.34e-08!50;UBERON:0006238!3.34e-08!50;UBERON:0001948!1.18e-07!5;UBERON:0002315!1.18e-07!5;UBERON:0004121!1.56e-07!102;UBERON:0000924!1.56e-07!102;UBERON:0006601!1.56e-07!102;UBERON:0002420!1.78e-07!8;UBERON:0007245!1.78e-07!8;UBERON:0010009!1.78e-07!8;UBERON:0010011!1.78e-07!8;UBERON:0000454!1.78e-07!8;UBERON:0002950!2.20e-07!4;UBERON:0001891!2.20e-07!4;UBERON:0009616!2.20e-07!4;UBERON:0000033!3.52e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-16,73;UBERON:0001016,9.83e-16,75;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0004121,1.26e-13,95;UBERON:0000924,1.26e-13,95;UBERON:0006601,1.26e-13,95;UBERON:0003076,5.72e-13,12;UBERON:0003057,5.72e-13,12;UBERON:0000073,1.98e-12,54;UBERON:0004733,4.74e-12,6;UBERON:0004732,4.74e-12,6;UBERON:0002028,4.74e-12,6;UBERON:0007277,4.74e-12,6;UBERON:0002950,2.94e-11,4;UBERON:0001891,2.94e-11,4;UBERON:0009616,2.94e-11,4;UBERON:0010286,2.94e-11,4;UBERON:0001049,6.51e-11,52;UBERON:0005068,6.51e-11,52;UBERON:0006241,6.51e-11,52;UBERON:0007135,6.51e-11,52;UBERON:0004766,6.66e-11,2;UBERON:0008193,6.66e-11,2;UBERON:0005913,6.66e-11,2;UBERON:0011158,6.66e-11,2;UBERON:0005744,6.66e-11,2;UBERON:0003457,6.66e-11,2;UBERON:0008001,6.66e-11,2;UBERON:0007497,6.66e-11,2;UBERON:0009955,6.66e-11,2;UBERON:0003067,6.66e-11,2;UBERON:0002546,6.66e-11,2;UBERON:0007914,6.66e-11,2;UBERON:0005253,6.66e-11,2;UBERON:0002227,6.66e-11,2;UBERON:0001846,6.66e-11,2;UBERON:0004339,6.66e-11,2;UBERON:0002105,6.66e-11,2;UBERON:0001678,6.66e-11,2;UBERON:0003128,6.66e-11,2;UBERON:0001694,6.66e-11,2;UBERON:0004681,6.66e-11,2;UBERON:0001839,6.66e-11,2;UBERON:0001690,6.66e-11,2;UBERON:0001844,6.66e-11,2;UBERON:0001849,6.66e-11,2;UBERON:0002499,6.66e-11,2;UBERON:0001855,6.66e-11,2;UBERON:0011137,6.66e-11,2;UBERON:0001703,6.66e-11,2;UBERON:0010323,6.66e-11,2;UBERON:0003129,6.66e-11,2;UBERON:0003069,6.66e-11,2;UBERON:0003051,6.66e-11,2;UBERON:0004637,6.66e-11,2;UBERON:0004761,6.66e-11,2;UBERON:0010113,6.66e-11,2;UBERON:0009123,6.66e-11,2;UBERON:0010351,6.66e-11,2;UBERON:0009617,6.66e-11,2;UBERON:0005641,6.66e-11,2;UBERON:0010349,6.66e-11,2;UBERON:0010371,2.46e-10,73;UBERON:0001896,8.81e-10,2;UBERON:0002298,8.81e-10,2;UBERON:0005290,8.81e-10,2;UBERON:0010096,8.81e-10,2;UBERON:0000369,3.68e-09,5;UBERON:0002435,3.68e-09,5;UBERON:0000204,3.68e-09,5;UBERON:0010082,3.68e-09,5;UBERON:0002616,1.31e-08,46;UBERON:0002346,1.62e-08,64;UBERON:0003075,1.62e-08,64;UBERON:0007284,1.62e-08,64;UBERON:0000955,2.14e-08,47;UBERON:0006238,2.14e-08,47;UBERON:0010314,9.76e-08,92;UBERON:0002038,4.17e-07,3;UBERON:0009663,4.17e-07,3;UBERON:0009661,4.17e-07,3;UBERON:0000125,4.17e-07,3;UBERON:0002308,4.17e-07,3;UBERON:0002257,6.35e-07,3 | |||
|phase1_expression=13.1322054625931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7575193384526,28.5655128806898,12.6766280701236,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0,2.20231761998777,0.383062014255563,0.153606533256243,5.27545150920775,4.20843160571084,2.08365348222704,0.837548997004143,2.8138130501584,1.98637722109853,1.47314292736834,0.284743361598206,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,6.05626705039726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.04723353406728,0,0,0,0,7.33974133083631,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.853668028770671,0,0.628839487883947,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.760437899670719,0.565879024158229,0.468207537349412,0.89635213366817,0.287177344778066,0.476293691283074,0.579421629724277,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.543216455383447,0,0.593175090620871,0.197008964751127,0,0.154936841185966,0.192906610981141,1.49886346762768,0,0,0.191288332068843,0,0 | |||
|short_description=p2@Barhl1 | |||
}} |
Latest revision as of 12:20, 26 September 2015
Short description: | p2@Barhl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Barhl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | -355bp_to_ENSMUST00000174027_5end |
EntrezGene: | Barhl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.93e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-23 | 23 |
neuron | 4.44e-19 | 33 |
neuronal stem cell | 4.44e-19 | 33 |
neuroblast | 4.44e-19 | 33 |
electrically signaling cell | 4.44e-19 | 33 |
ectodermal cell | 1.94e-16 | 44 |
neurectodermal cell | 1.94e-16 | 44 |
electrically responsive cell | 7.34e-16 | 39 |
electrically active cell | 7.34e-16 | 39 |
granule cell | 7.90e-16 | 3 |
striatum neuron | 6.38e-15 | 3 |
neural cell | 3.27e-14 | 43 |
receptor cell | 6.66e-11 | 2 |
auditory epithelial cell | 6.66e-11 | 2 |
sensory epithelial cell | 6.66e-11 | 2 |
embryonic cell | 1.45e-09 | 70 |
neuron of the substantia nigra | 4.17e-07 | 3 |
neuron of the ventral spinal cord | 6.35e-07 | 3 |