FFCP PHASE1:Mm9::chr10:126604725..126604740,+: Difference between revisions
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|id=chr10:126604725..126604740,+
|short_description=p@chr10:126604725..126604740,+
|description=CAGE_peak_at_chr10:126604725..126604740,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126604725..126604740,+ | |||
|description=CAGE_peak_at_chr10:126604725..126604740,+ | |||
|id=chr10:126604725..126604740,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.91e-11!9;CL:0002251!1.91e-11!9;CL:0000791!6.40e-09!9;CL:0000789!6.40e-09!9;CL:0002420!6.40e-09!9;CL:0002419!6.40e-09!9;CL:0000790!6.40e-09!9;CL:0000239!2.16e-08!6;CL:0000677!2.16e-08!6;CL:0000212!2.16e-08!6;CL:0000584!2.16e-08!6;CL:0000084!2.60e-08!11;CL:0000827!2.60e-08!11;CL:0000624!4.82e-08!8;CL:0000838!2.12e-07!12;CL:0000066!3.55e-07!25;CL:0002076!4.71e-07!15;CL:0000075!5.68e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.94e-24,9;CL:0002251,2.94e-24,9;CL:0000239,3.07e-17,6;CL:0000677,3.07e-17,6;CL:0000584,3.07e-17,6;CL:0000075,1.13e-14,7;CL:0000066,2.89e-14,25;CL:0002076,7.15e-14,15;CL:0000223,5.58e-10,20;CL:0000682,7.96e-10,3;CL:0002250,1.34e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.93e-19!59;UBERON:0000344!7.66e-18!15;UBERON:0004923!2.93e-16!24;UBERON:0001242!1.85e-15!13;UBERON:0000060!1.85e-15!13;UBERON:0001262!1.85e-15!13;UBERON:0004786!1.85e-15!13;UBERON:0004119!2.91e-15!130;UBERON:0000925!2.91e-15!130;UBERON:0006595!2.91e-15!130;UBERON:0000160!3.70e-15!43;UBERON:0001007!5.27e-15!128;UBERON:0001555!5.27e-15!128;UBERON:0007026!5.27e-15!128;UBERON:0004921!1.71e-13!126;UBERON:0004185!1.71e-13!126;UBERON:0003350!1.91e-11!9;UBERON:0004808!1.91e-11!9;UBERON:0001277!1.91e-11!9;UBERON:0000485!7.68e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.97e-39,15;UBERON:0000160,3.83e-34,31;UBERON:0001242,1.61e-33,13;UBERON:0001262,1.61e-33,13;UBERON:0004786,1.61e-33,13;UBERON:0004923,3.11e-26,24;UBERON:0003350,2.94e-24,9;UBERON:0004808,2.94e-24,9;UBERON:0001277,2.94e-24,9;UBERON:0005409,4.53e-23,47;UBERON:0000485,1.54e-19,11;UBERON:0002108,9.79e-11,4;UBERON:0001007,1.84e-10,116;UBERON:0001555,1.84e-10,116;UBERON:0007026,1.84e-10,116;UBERON:0004119,3.45e-10,118;UBERON:0000925,3.45e-10,118;UBERON:0006595,3.45e-10,118;UBERON:0002465,6.06e-09,3;UBERON:0000331,1.51e-08,3;UBERON:0002116,1.51e-08,3;UBERON:0001204,1.51e-08,3;UBERON:0001168,1.51e-08,3;UBERON:0004921,1.56e-08,114;UBERON:0001962,5.90e-07,2;UBERON:0001961,5.90e-07,2;UBERON:0001744,5.90e-07,2 | |||
|phase1_expression=0,9.42233600626275,9.09998478779072,5.14189159221611,8.01433167914156,11.2479112180966,10.2789561862031,1.03298658753261,0.422366166455,0.234064526321993,8.21846247482424,5.50427897067821,0.513602189793617,0.262261207256992,0,0,0,0,0.137114433605739,0.42438965179803,0,0.198581902401771,0,12.7993938234725,8.25873411841812,8.6134794617253,12.9228598847722,14.6520438226405,3.04037471130198,5.04060259519861,5.98672378769323,0,0,0,7.51014211353314,4.48833542467929,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.432982082022428,0,0,1.25602267690966,1.55362730188303,0.29688427812965,0,0,0,0,0,0,1.73036477414062,0,0.884610551949874,0,0,0,1.86391761218122,0,0.209446706813455,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,2.11560453330835,0,0,0,0.605050573870028,0.444756087689741,0,4.74529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0,6.29173586057955,3.24207074812041,4.58024928485045,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,3.20628920292836,0,0.170870880797853,0,0,0,0.410082683163076,0.228778173206523,0,0,0,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.674321731924103,0.165306911450672,1.57053565190418,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,9.42233600626275,9.09998478779072,5.14189159221611,8.01433167914156,11.2479112180966,10.2789561862031,1.03298658753261,0.422366166455,0.234064526321993,8.21846247482424,5.50427897067821,0.513602189793617,0.262261207256992,0,0,0,0,0.137114433605739,0.42438965179803,0,0.198581902401771,0,12.7993938234725,8.25873411841812,8.6134794617253,12.9228598847722,14.6520438226405,3.04037471130198,5.04060259519861,5.98672378769323,0,0,0,7.51014211353314,4.48833542467929,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.432982082022428,0,0,1.25602267690966,1.55362730188303,0.29688427812965,0,0,0,0,0,0,1.73036477414062,0,0.884610551949874,0,0,0,1.86391761218122,0,0.209446706813455,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,2.11560453330835,0,0,0,0.605050573870028,0.444756087689741,0,4.74529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0,6.29173586057955,3.24207074812041,4.58024928485045,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,3.20628920292836,0,0.170870880797853,0,0,0,0.410082683163076,0.228778173206523,0,0,0,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.674321731924103,0.165306911450672,1.57053565190418,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr10:126604725..126604740,+ | |||
}} | }} |
Latest revision as of 00:50, 4 August 2015
Short description: | p@chr10:126604725..126604740, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126604725..126604740, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.94e-24 | 9 |
epithelial cell of alimentary canal | 2.94e-24 | 9 |
brush border epithelial cell | 3.07e-17 | 6 |
gut absorptive cell | 3.07e-17 | 6 |
enterocyte | 3.07e-17 | 6 |
columnar/cuboidal epithelial cell | 1.13e-14 | 7 |
epithelial cell | 2.89e-14 | 25 |
endo-epithelial cell | 7.15e-14 | 15 |
endodermal cell | 5.58e-10 | 20 |
M cell of gut | 7.96e-10 | 3 |
intestinal crypt stem cell | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.97e-39 | 15 |
intestine | 3.83e-34 | 31 |
intestinal mucosa | 1.61e-33 | 13 |
wall of intestine | 1.61e-33 | 13 |
gastrointestinal system mucosa | 1.61e-33 | 13 |
organ component layer | 3.11e-26 | 24 |
epithelium of mucosa | 2.94e-24 | 9 |
gastrointestinal system epithelium | 2.94e-24 | 9 |
intestinal epithelium | 2.94e-24 | 9 |
gastrointestinal system | 4.53e-23 | 47 |
simple columnar epithelium | 1.54e-19 | 11 |
small intestine | 9.79e-11 | 4 |
digestive system | 1.84e-10 | 116 |
digestive tract | 1.84e-10 | 116 |
primitive gut | 1.84e-10 | 116 |
endoderm-derived structure | 3.45e-10 | 118 |
endoderm | 3.45e-10 | 118 |
presumptive endoderm | 3.45e-10 | 118 |
lymphoid system | 6.06e-09 | 3 |
ileal mucosa | 1.51e-08 | 3 |
ileum | 1.51e-08 | 3 |
mucosa of small intestine | 1.51e-08 | 3 |
wall of small intestine | 1.51e-08 | 3 |
subdivision of digestive tract | 1.56e-08 | 114 |
gut-associated lymphoid tissue | 5.90e-07 | 2 |
mucosa-associated lymphoid tissue | 5.90e-07 | 2 |
lymphoid tissue | 5.90e-07 | 2 |