FFCP PHASE1:Hg19::chr6:78173168..78173198,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5287 | |||
|TSSclassifier=strong | |||
|UniProt=P28222 | |||
|association_with_transcript=-48bp_to_NM_000863,uc003pil.1_5end | |||
|cluster_id=chr6:78173168..78173198,- | |||
|description=CAGE_peak_1_at_HTR1B_5end | |||
|id=chr6:78173168..78173198,- | |||
|ontology_enrichment_celltype=CL:0000115!9.59e-15!35;CL:0002139!2.40e-14!24;CL:0000071!7.99e-13!18;CL:0002546!7.99e-13!18;CL:0002078!1.93e-10!44;CL:1000413!2.51e-09!9;CL:0000213!3.08e-07!57;CL:0000215!3.08e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.33e-26;18!CL:0002139;7.78e-19;24!CL:0000115;1.98e-18;36!CL:1000413;5.47e-18;9!CL:0002543;1.11e-11;6!CL:0002544;2.68e-11;6!CL:0002078;8.62e-10;45!CL:0002618;2.02e-09;3!CL:0002623;3.57e-09;3!CL:0000213;1.80e-08;58!CL:0000215;1.80e-08;58!CL:0002545;5.90e-07;2!CL:0002367;8.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.87e-26,18;CL:0002546,1.87e-26,18;CL:0000115,4.38e-22,36;CL:0002139,6.63e-19,24;CL:1000413,3.26e-18,9;CL:0002078,1.29e-16,45;CL:0000213,9.24e-12,58;CL:0000215,9.24e-12,58;CL:0002543,1.10e-11,6;CL:0002544,2.79e-11,6;CL:0002618,1.81e-09,3;CL:0002623,2.51e-09,3;CL:0000076,5.51e-07,63;CL:0002545,5.96e-07,2;CL:0002367,7.88e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;2.33e-26;18!UBERON:0010122;9.46e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!6.90e-19!86;UBERON:0007284!6.90e-19!86;UBERON:0000483!8.32e-19!309;UBERON:0000033!8.72e-19!123;UBERON:0000119!1.33e-18!312;UBERON:0003056!1.78e-18!61;UBERON:0004121!7.67e-18!169;UBERON:0007023!9.08e-18!115;UBERON:0002616!2.16e-17!59;UBERON:0000153!2.37e-17!129;UBERON:0007811!2.37e-17!129;UBERON:0002346!3.88e-17!90;UBERON:0000924!9.36e-17!173;UBERON:0006601!9.36e-17!173;UBERON:0004111!3.33e-16!241;UBERON:0001869!5.27e-16!32;UBERON:0001049!5.32e-16!57;UBERON:0005068!5.32e-16!57;UBERON:0006241!5.32e-16!57;UBERON:0007135!5.32e-16!57;UBERON:0003080!7.44e-16!42;UBERON:0002020!9.95e-16!34;UBERON:0003528!9.95e-16!34;UBERON:0001893!1.98e-15!34;UBERON:0002780!3.74e-15!41;UBERON:0001890!3.74e-15!41;UBERON:0006240!3.74e-15!41;UBERON:0000477!4.16e-15!286;UBERON:0002791!9.71e-15!33;UBERON:0000955!3.38e-14!69;UBERON:0006238!3.38e-14!69;UBERON:0005743!1.41e-13!86;UBERON:0000025!1.76e-13!194;UBERON:0001017!4.66e-13!82;UBERON:0001986!7.99e-13!18;UBERON:0004638!7.99e-13!18;UBERON:0004852!7.99e-13!18;UBERON:0002619!1.46e-11!22;UBERON:0000468!1.86e-11!659;UBERON:0000956!2.58e-11!25;UBERON:0000203!2.58e-11!25;UBERON:0000922!3.78e-11!612;UBERON:0002049!6.33e-11!79;UBERON:0007798!6.33e-11!79;UBERON:0000073!1.01e-10!94;UBERON:0001016!1.01e-10!94;UBERON:0000487!1.68e-10!22;UBERON:0001950!2.14e-10!20;UBERON:0000467!5.48e-10!625;UBERON:0000480!7.10e-10!626;UBERON:0000475!7.43e-10!365;UBERON:0000481!8.28e-10!347;UBERON:0003915!2.51e-09!9;UBERON:0004700!2.51e-09!9;UBERON:0001917!2.51e-09!9;UBERON:0002050!2.84e-09!605;UBERON:0005423!2.84e-09!605;UBERON:0000064!5.00e-09!219;UBERON:0000923!5.13e-09!604;UBERON:0005291!5.13e-09!604;UBERON:0006598!5.13e-09!604;UBERON:0002532!5.13e-09!604;UBERON:0004535!7.21e-09!110;UBERON:0006914!1.87e-08!25;UBERON:0001009!3.23e-08!113;UBERON:0000055!7.85e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.33e-26;18!UBERON:0001986;2.33e-26;18!UBERON:0004852;2.33e-26;18!UBERON:0000487;6.95e-21;22!UBERON:0003915;5.47e-18;9!UBERON:0004700;5.47e-18;9!UBERON:0001917;5.47e-18;9!UBERON:0006914;6.19e-18;25!UBERON:0000490;1.22e-14;33!UBERON:0000369;2.38e-11;4!UBERON:0002435;2.38e-11;4!UBERON:0000204;2.38e-11;4!UBERON:0001869;6.51e-11;32!UBERON:0001638;1.59e-10;9!UBERON:0003920;1.59e-10;9!UBERON:0004582;1.59e-10;9!UBERON:0002791;3.13e-10;32!UBERON:0003528;3.18e-10;34!UBERON:0002020;3.18e-10;34!UBERON:0010260;3.26e-10;9!UBERON:0001893;4.05e-10;34!UBERON:0005383;2.99e-09;3!UBERON:0005382;2.99e-09;3!UBERON:0002066;3.36e-09;5!UBERON:0001950;3.36e-08;20!UBERON:0001870;5.12e-08;3!UBERON:0002420;1.54e-07;9!UBERON:0007245;1.54e-07;9!UBERON:0010009;1.54e-07;9!UBERON:0010011;1.54e-07;9!UBERON:0000454;1.54e-07;9!UBERON:0001044;1.70e-07;6!UBERON:0003293;1.70e-07;6!UBERON:0003294;1.70e-07;6!UBERON:0010047;1.70e-07;6!UBERON:0003408;1.70e-07;6!UBERON:0000167;1.70e-07;6!UBERON:0002619;2.43e-07;22!UBERON:0000125;2.78e-07;9!UBERON:0002308;2.78e-07;9!UBERON:0007500;3.41e-07;56!UBERON:0001981;3.41e-07;56!UBERON:0004537;3.41e-07;56!UBERON:0003914;5.35e-07;74!UBERON:0005800;5.90e-07;2!UBERON:0001515;5.90e-07;2!UBERON:0005969;8.36e-07;2!UBERON:0003956;8.36e-07;2!UBERON:0001873;9.46e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.87e-26,18;UBERON:0001986,1.87e-26,18;UBERON:0004852,1.87e-26,18;UBERON:0000487,5.82e-21,22;UBERON:0003915,3.26e-18,9;UBERON:0004700,3.26e-18,9;UBERON:0001917,3.26e-18,9;UBERON:0006914,5.31e-18,25;UBERON:0002049,5.69e-13,78;UBERON:0007798,5.69e-13,78;UBERON:0007500,1.44e-12,59;UBERON:0001981,1.44e-12,59;UBERON:0004537,1.44e-12,59;UBERON:0006965,1.44e-12,59;UBERON:0001869,4.11e-12,32;UBERON:0000369,1.18e-11,4;UBERON:0002435,1.18e-11,4;UBERON:0000204,1.18e-11,4;UBERON:0010082,1.18e-11,4;UBERON:0003528,2.16e-11,34;UBERON:0002020,2.16e-11,34;UBERON:0001893,3.16e-11,34;UBERON:0000025,5.99e-11,192;UBERON:0002791,1.96e-10,32;UBERON:0001638,2.10e-10,9;UBERON:0003920,2.10e-10,9;UBERON:0004582,2.10e-10,9;UBERON:0000055,3.12e-10,68;UBERON:0003056,3.48e-10,61;UBERON:0004111,3.60e-10,240;UBERON:0010260,5.15e-10,9;UBERON:0004121,1.03e-09,171;UBERON:0000924,1.03e-09,171;UBERON:0006601,1.03e-09,171;UBERON:0005383,2.65e-09,3;UBERON:0005382,2.65e-09,3;UBERON:0002066,4.43e-09,5;UBERON:0002780,8.32e-09,41;UBERON:0001890,8.32e-09,41;UBERON:0003080,8.32e-09,41;UBERON:0006240,8.32e-09,41;UBERON:0004872,2.19e-08,83;UBERON:0004535,2.29e-08,109;UBERON:0003075,2.88e-08,82;UBERON:0007284,2.88e-08,82;UBERON:0001950,3.37e-08,20;UBERON:0001870,4.25e-08,3;UBERON:0001009,5.53e-08,112;UBERON:0000483,7.70e-08,306;UBERON:0002420,1.02e-07,9;UBERON:0007245,1.02e-07,9;UBERON:0010009,1.02e-07,9;UBERON:0010011,1.02e-07,9;UBERON:0000454,1.02e-07,9;UBERON:0002346,1.16e-07,86;UBERON:0000119,1.17e-07,309;UBERON:0000125,1.35e-07,9;UBERON:0002308,1.35e-07,9;UBERON:0001044,1.99e-07,6;UBERON:0003293,1.99e-07,6;UBERON:0003294,1.99e-07,6;UBERON:0010047,1.99e-07,6;UBERON:0000167,1.99e-07,6;UBERON:0000955,2.12e-07,68;UBERON:0006238,2.12e-07,68;UBERON:0002619,2.44e-07,22;UBERON:0003914,2.67e-07,117;UBERON:0000073,3.06e-07,53;UBERON:0002616,3.06e-07,53;UBERON:0000923,4.75e-07,560;UBERON:0010316,4.75e-07,560;UBERON:0005291,4.75e-07,560;UBERON:0006598,4.75e-07,560;UBERON:0010317,4.75e-07,560;UBERON:0002532,4.75e-07,560;UBERON:0010371,5.64e-07,104;UBERON:0005800,5.96e-07,2;UBERON:0001515,5.96e-07,2;UBERON:0002050,6.92e-07,564;UBERON:0005969,7.88e-07,2;UBERON:0003956,7.88e-07,2;UBERON:0001873,9.30e-07,2;UBERON:0010122,9.30e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,2.62129646556207,1.58260186937072,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.376627918784408,0,0,0,2.75354993794233,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.261958150995425,0.728590576585084,0.741568885568859,0,0,0,0,0,0,1.78886166630035,0.860234595106124,2.42998351125316,1.13061588384802,3.35599548967925,1.92582629358047,1.46296476575767,0,0.71153252537342,0.66944122552934,0.805658634218294,0,1.22031028774085,5.14728312484216,3.24056779152704,2.85759130509055,3.14341121676638,4.27923625836624,3.06633274931766,0,1.46561395144326,0,0,0.872188104285069,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0.942974704487816,0.163461903113459,1.21085942115945,0,2.57753575017176,0.312160076830321,0,0,1.64408298101271,0.485618833104395,0.561803226808994,0.61246251376468,0.982674538494144,0.103325781175765,0,0,0.910161361938026,0,0.505008341862199,0.250237039743928,2.21651292387346,0,0,0,0.340296549480063,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.609868530647977,0.662648841607426,0.348581828608555,0.207322110030741,0.504641701751257,0,0,0.643240938192885,1.38134921352481,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.502644862058154,2.4998880192803,1.3032332212413,0,0,0,1.52631302506568,0.721832238805369,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0.176096868026452,1.65862492432618,2.16179930125442,1.64115163454294,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,1.86156681609409,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.623912584592421,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0.211103257785751,1.13733384070897,0,0.647747748306418,0,1.35473218771926,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0,0,0,0.574265537996172,0.650060246036521,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.330569830721956,1.53752053892085,1.65896526242959,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,1.58189712359363,0.762520775695299,0.511795582622668,0.855877976067841,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,1.54911749049875,1.12678241012897,1.14729081763241,0.589494246078727,0.35667105148125,0,0,0,2.65631221636001,4.89908608342976,0,0,0,0,0,0,0.443430153536676,0.918893600827838,0,0,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.894704431569664,0.333698283423817,0,0,1.23087398947712,0,0,0,0,0.439524537815682,0,0,0,0,0,0.921482106297696,3.97659059106519,0.281338832821026,0,0,0,5.18044769452781,0,0,0,0,0.622079175323615,0,0,0,1.28236427328014,0,0,0.969332746095218,1.48428957058962,0,0,0,1.44999915086959,0,0,0,0,0,0,2.65722415744152,3.13550740426061,0,0,0,1.53569778007781,0,0,1.00035336054936,0,0,0,0,0,0.824378340616761,0,0,0,1.66211681900156,0,0,0,0,1.74830236878417,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0,2.41981432097328,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.484945082442097,0,0.225980740780532,0,0.19871461170299,1.07628353124994,0.195551382734803,0,0.85381197895741,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0.279282401272254,1.14580212005842,0,0,0,0,0.739018197353989,1.80149941771202,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.275078873194468,0,0.2249738915515,0,1.21499113316049,0,0.157611414598396,0.104909176269996,0,0.537862017998534,0,0,0,0,0,0,0,1.19730191562487,1.4776653734881,0,0,0,0,1.93924434542326,0.39669780522807,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,1.6274820991845,0.573409195690071,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0.521988583930423,0,0.463044948647668,0,0,0.926404341482917,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0.640150378164845,0,3.40509572140102,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,1.79841830270087,0,0.957803154342908,0.615349092722265,0.252071696221718,1.72893131160545,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,1.14813893851271,0,1.2401207790071,1.45856363445986,0,1.09651553371436,0,0,0,0,0,0.606965604236632,0.455324382702595,0.443511850813194,0.115233987555779,0,0.271878931907327,0.789273282754189,0,0,0.627944742804112,2.67096502857203,0,0,0,0,0.285906176706625,0,0,0,0,1.65772931330429,5.1215543128185,9.67763526539729,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0.655678681511872,0,1.47088993052343,0,0.392616934229891,0.594092800654172,0,0,0.0939839179798536,0,0,0,0,0,9.49437304720472,0,0,0,0.679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.327796715891087,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0.310298987585686,0,0.23806443146374,0,0,0.112131862580613,0,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p1@HTR1B | |||
}} |
Latest revision as of 21:46, 19 September 2015
Short description: | p1@HTR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTR1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_NM_000863, uc003pil.1_5end |
EntrezGene: | HTR1B |
HGNC: | 5287 |
UniProt: | P28222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.87e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.87e-26 | 18 |
endothelial cell | 4.38e-22 | 36 |
endothelial cell of vascular tree | 6.63e-19 | 24 |
endothelial cell of artery | 3.26e-18 | 9 |
meso-epithelial cell | 1.29e-16 | 45 |
lining cell | 9.24e-12 | 58 |
barrier cell | 9.24e-12 | 58 |
vein endothelial cell | 1.10e-11 | 6 |
aortic endothelial cell | 2.79e-11 | 6 |
endothelial cell of umbilical vein | 1.81e-09 | 3 |
acinar cell of salivary gland | 2.51e-09 | 3 |
squamous epithelial cell | 5.51e-07 | 63 |
thoracic aorta endothelial cell | 5.96e-07 | 2 |
trabecular meshwork cell | 7.88e-07 | 2 |