FFCP PHASE1:Mm9::chr2:119063370..119063381,+: Difference between revisions
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{{FFCP|EntrezGene=20732|HGNC=|MCL_coexpression_id=12|UniProt=Q9R097|association_with_transcript=81bp_to_ENSMUST00000110817_5end|description=CAGE_peak_9_at_Spint1_5end|id=chr2:119063370..119063381,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,3.53e-09,7;CL:0000239,1.57e-08,6;CL:0000677,1.57e-08,6;CL:0000584,1.57e-08,6;CL:0000066,3.81e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.90e-17!43;UBERON:0005409!2.35e-17!59;UBERON:0001007!1.32e-15!128;UBERON:0001555!1.32e-15!128;UBERON:0007026!1.32e-15!128;UBERON:0004119!1.77e-15!130;UBERON:0000925!1.77e-15!130;UBERON:0006595!1.77e-15!130;UBERON:0004921!2.01e-14!126;UBERON:0004185!2.01e-14!126;UBERON:0000464!3.04e-09!57;UBERON:0000344!2.71e-08!15;UBERON:0007023!1.31e-07!51;UBERON:0002108!3.07e-07!16;UBERON:0001242!6.54e-07!13;UBERON:0000060!6.54e-07!13;UBERON:0001262!6.54e-07!13;UBERON:0004786!6.54e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.53e-18,31;UBERON:0005409,9.57e-13,47;UBERON:0000344,3.51e-12,15;UBERON:0001007,8.89e-12,116;UBERON:0001555,8.89e-12,116;UBERON:0007026,8.89e-12,116;UBERON:0004119,2.34e-11,118;UBERON:0000925,2.34e-11,118;UBERON:0006595,2.34e-11,118;UBERON:0004921,2.29e-10,114;UBERON:0001242,8.79e-10,13;UBERON:0001262,8.79e-10,13;UBERON:0004786,8.79e-10,13;UBERON:0007023,1.27e-08,51;UBERON:0004923,1.18e-07,24|phase1_expression=0.960893082628764,3.14077866875425,4.09499315450582,2.41971369045464,6.01074875935617,3.02182689441402,2.33612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0,0,3.35984087866154,4.35877634027623,4.01962374880514,3.01533397311352,3.23206849028834,4.3705386474966,3.2763916868791,4.21287970245079,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,1.5154372870785,1.26679932737549,1.51657333504435,0.91347103775248,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.251333182659351,5.43828929015623,0.144599356919912,0,0,0,0,3.72783522436244,0,0.628340120440365,3.0654846625031,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0.497627882440372,1.26361379216837,2.52530227063769,0,0,0,0,0,0,0.281105173679186,0.517406741478031,0.431135985865684,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.30418782983798,2.64450566663544,0.213288250535234,0,1.03093969057675,0.605050573870028,0.889512175379481,0.760902504450237,1.89811624617805,1.97638745668813,1.75934646160189,2.58643413653496,1.55971269695296,4.49409704327111,1.72910439899755,3.38540164532424,0.189667900953082,0.228497025219458,0,0.407302655690628,1.35766741017338,1.19230893813542,1.64414996523069,2.06654207171443,1.41298855057237,1.23397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,1.84753190166605,0,0,0.339490171550376,1.17345124144251,1.34005005953453,2.14239276797412,1.36593553500459,0.945810864637146,0.44292937929755,1.43509291791738,1.14704320301017,1.03610989119537,1.3018415272336,0,0,1.47529281905711,0.827810238914197,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0,0.651547837414304,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,2.07465587731488,2.36241514304618,1.84461088766356,3.10113951801865,0.727067458955011,0.712994756769443,0.948110273807448,0,2.06271086496374,4.76615448055303,0,0.517434735131018,0.857348140126369,1.24138163549592,1.42695054081656,1.48094118541909,2.74018454203139,0,0.63549621259146,2.64634077665954,1.15420377059036,0.322928853391811,0.603129249281559,1.07435109602823,2.79039529566604,3.20628920292836,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0,3.81868247206045,0.158167996790568,0.609958401380546,0.756037385752609,0.836353184057875,0.436725127492355,0.674321731924103,1.1571483801547,0.523511883968059,1.8146096260851,3.72803587852155,0.56369293868419,0,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.58678619322877,1.17183946359555,1.46803082195995,0.483168241652012,0.288030006257865,0.316011120628178,1.41907650703115,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.738447635872886,0.403865799792591,0.0762068066549998,0.100826185136841,0.487289403698762,0.481059208201647,0.350630706544707,1.58711268530648,0.665957860122194,0.179427713218951,0.671538465456314,1.35232715822533,0,0.549454872801795,1.50057865355346,1.50471631210609,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.290692833264657,0,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0,0,0,0,0.249810577937946,0.233931608445408,0.644613162144895,0,0.661774257358546,0.231867835620421|short_description=p9@Spint1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20732 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R097 | |||
|association_with_transcript=81bp_to_ENSMUST00000110817_5end | |||
|cluster_id=chr2:119063370..119063381,+ | |||
|description=CAGE_peak_9_at_Spint1_5end | |||
|id=chr2:119063370..119063381,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,3.53e-09,7;CL:0000239,1.57e-08,6;CL:0000677,1.57e-08,6;CL:0000584,1.57e-08,6;CL:0000066,3.81e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.90e-17!43;UBERON:0005409!2.35e-17!59;UBERON:0001007!1.32e-15!128;UBERON:0001555!1.32e-15!128;UBERON:0007026!1.32e-15!128;UBERON:0004119!1.77e-15!130;UBERON:0000925!1.77e-15!130;UBERON:0006595!1.77e-15!130;UBERON:0004921!2.01e-14!126;UBERON:0004185!2.01e-14!126;UBERON:0000464!3.04e-09!57;UBERON:0000344!2.71e-08!15;UBERON:0007023!1.31e-07!51;UBERON:0002108!3.07e-07!16;UBERON:0001242!6.54e-07!13;UBERON:0000060!6.54e-07!13;UBERON:0001262!6.54e-07!13;UBERON:0004786!6.54e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.53e-18,31;UBERON:0005409,9.57e-13,47;UBERON:0000344,3.51e-12,15;UBERON:0001007,8.89e-12,116;UBERON:0001555,8.89e-12,116;UBERON:0007026,8.89e-12,116;UBERON:0004119,2.34e-11,118;UBERON:0000925,2.34e-11,118;UBERON:0006595,2.34e-11,118;UBERON:0004921,2.29e-10,114;UBERON:0001242,8.79e-10,13;UBERON:0001262,8.79e-10,13;UBERON:0004786,8.79e-10,13;UBERON:0007023,1.27e-08,51;UBERON:0004923,1.18e-07,24 | |||
|phase1_expression=0.960893082628764,3.14077866875425,4.09499315450582,2.41971369045464,6.01074875935617,3.02182689441402,2.33612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0,0,3.35984087866154,4.35877634027623,4.01962374880514,3.01533397311352,3.23206849028834,4.3705386474966,3.2763916868791,4.21287970245079,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,1.5154372870785,1.26679932737549,1.51657333504435,0.91347103775248,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.251333182659351,5.43828929015623,0.144599356919912,0,0,0,0,3.72783522436244,0,0.628340120440365,3.0654846625031,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0.497627882440372,1.26361379216837,2.52530227063769,0,0,0,0,0,0,0.281105173679186,0.517406741478031,0.431135985865684,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.30418782983798,2.64450566663544,0.213288250535234,0,1.03093969057675,0.605050573870028,0.889512175379481,0.760902504450237,1.89811624617805,1.97638745668813,1.75934646160189,2.58643413653496,1.55971269695296,4.49409704327111,1.72910439899755,3.38540164532424,0.189667900953082,0.228497025219458,0,0.407302655690628,1.35766741017338,1.19230893813542,1.64414996523069,2.06654207171443,1.41298855057237,1.23397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,1.84753190166605,0,0,0.339490171550376,1.17345124144251,1.34005005953453,2.14239276797412,1.36593553500459,0.945810864637146,0.44292937929755,1.43509291791738,1.14704320301017,1.03610989119537,1.3018415272336,0,0,1.47529281905711,0.827810238914197,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0,0.651547837414304,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,2.07465587731488,2.36241514304618,1.84461088766356,3.10113951801865,0.727067458955011,0.712994756769443,0.948110273807448,0,2.06271086496374,4.76615448055303,0,0.517434735131018,0.857348140126369,1.24138163549592,1.42695054081656,1.48094118541909,2.74018454203139,0,0.63549621259146,2.64634077665954,1.15420377059036,0.322928853391811,0.603129249281559,1.07435109602823,2.79039529566604,3.20628920292836,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0,3.81868247206045,0.158167996790568,0.609958401380546,0.756037385752609,0.836353184057875,0.436725127492355,0.674321731924103,1.1571483801547,0.523511883968059,1.8146096260851,3.72803587852155,0.56369293868419,0,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.58678619322877,1.17183946359555,1.46803082195995,0.483168241652012,0.288030006257865,0.316011120628178,1.41907650703115,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.738447635872886,0.403865799792591,0.0762068066549998,0.100826185136841,0.487289403698762,0.481059208201647,0.350630706544707,1.58711268530648,0.665957860122194,0.179427713218951,0.671538465456314,1.35232715822533,0,0.549454872801795,1.50057865355346,1.50471631210609,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.290692833264657,0,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0,0,0,0,0.249810577937946,0.233931608445408,0.644613162144895,0,0.661774257358546,0.231867835620421 | |||
|short_description=p9@Spint1 | |||
}} |
Latest revision as of 14:04, 25 September 2015
Short description: | p9@Spint1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Spint1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 81bp_to_ENSMUST00000110817_5end |
EntrezGene: | Spint1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 3.53e-09 | 7 |
brush border epithelial cell | 1.57e-08 | 6 |
gut absorptive cell | 1.57e-08 | 6 |
enterocyte | 1.57e-08 | 6 |
epithelial cell | 3.81e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.53e-18 | 31 |
gastrointestinal system | 9.57e-13 | 47 |
mucosa | 3.51e-12 | 15 |
digestive system | 8.89e-12 | 116 |
digestive tract | 8.89e-12 | 116 |
primitive gut | 8.89e-12 | 116 |
endoderm-derived structure | 2.34e-11 | 118 |
endoderm | 2.34e-11 | 118 |
presumptive endoderm | 2.34e-11 | 118 |
subdivision of digestive tract | 2.29e-10 | 114 |
intestinal mucosa | 8.79e-10 | 13 |
wall of intestine | 8.79e-10 | 13 |
gastrointestinal system mucosa | 8.79e-10 | 13 |
adult organism | 1.27e-08 | 51 |
organ component layer | 1.18e-07 | 24 |