FFCP PHASE1:Mm9::chr1:74306590..74306594,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1755|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:74306590..74306594,+|id=chr1:74306590..74306594,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.73e-09!88;UBERON:0000926!3.01e-09!193;UBERON:0004120!3.01e-09!193;UBERON:0006603!3.01e-09!193;UBERON:0004177!1.17e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000077,4.84e-10,35;UBERON:0003081,1.16e-09,87;UBERON:0004177,4.24e-09,29;UBERON:0005057,4.24e-09,29;UBERON:0003408,3.55e-08,24;UBERON:0000926,6.95e-08,120;UBERON:0004120,6.95e-08,120;UBERON:0006603,6.95e-08,120;UBERON:0002390,8.96e-08,45;UBERON:0003061,8.96e-08,45;UBERON:0002370,1.01e-07,23;UBERON:0000974,1.01e-07,23;UBERON:0004807,1.01e-07,23;UBERON:0005058,1.01e-07,23;UBERON:0003351,1.01e-07,23;UBERON:0009113,1.01e-07,23;UBERON:0003295,1.01e-07,23;UBERON:0009722,1.01e-07,23;UBERON:0005562,1.01e-07,23;UBERON:0007690,1.01e-07,23;UBERON:0002193,3.30e-07,48;UBERON:0002405,3.30e-07,48;UBERON:0006562,4.65e-07,24;UBERON:0001557,4.65e-07,24;UBERON:0001042,4.65e-07,24;UBERON:0008814,4.65e-07,24;UBERON:0009145,4.65e-07,24|phase1_expression=0.320297694209588,0,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.700837921786577,3.22808308603941,4.92760527530834,2.80877431586392,2.91070545983358,2.15384829287408,5.30722262786738,2.97229368224591,0.999329285446988,1.61980213911861,0.699561878128147,5.52058789376916,4.2505474417779,3.81950686618227,1.19060606211498,1.98581902401771,0.783599367416806,0.95995453676044,0.91763712426868,0,0.430761996159075,0.430942465371778,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.816677425049476,4.60384793810598,3.1253413780952,2.09409497589519,4.1176204162171,6.83045484958446,1.94204141212461,0.881277725829041,1.11514624341466,1.65192076945513,0,0,0,0,0,0,4.36234775750115,1.45072428402269,4.03312558970957,0.514518872071894,1.14613375975503,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.589257170947335,0.569486723196412,0,0.227178579999552,0.529000920747499,2.6087803983151,0,0,0,0,0.448026887097336,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,0.281686839553361,2.56652954828636,0,0,0.216491041011214,1.26679932737549,1.01104889002957,1.02765491747154,2.07150306917737,1.03909497345377,0.520455980298408,0.608930956624282,0.461230994512117,0.753613202763113,1.52865319276416,0.251333182659351,2.96633961281249,1.15679485535929,4.42305275974937,0.970601099684455,1.32504911076236,1.45462575940567,1.86391761218122,0,1.04723353406728,3.0654846625031,4.07371423320129,1.19980546198682,2.92261522268049,0.449371918214468,0.915001205637253,0.753926112677186,0.521472960576829,1.02286182932132,0.20778804455956,0.162241263067758,1.42575109390443,2.86136032403214,6.06534620240819,1.26265113531884,0.520481771850815,0.229902104433473,0.540186389416048,0.60281927134286,1.36072998302656,2.0498195245576,1.21812241927647,1.03481348295606,0.862271971731369,1.13463648100692,0.351902248327898,0.657587197282725,2.22437799380478,0.696504333044333,1.64625709126355,2.18937693500343,0.702213187313235,0.772043721344145,2.84163499395593,1.24275463521301,1.17263029990548,0.720248245844059,0.23674473558521,1.37734962223183,1.3884040159864,1.86027155800326,1.07309360559848,1.5179494507732,2.79751744852917,1.80584210487005,1.05389452409612,1.60819986167866,1.53685080703735,0.536825675041487,1.47202963994889,0.617427674275707,2.31293148088659,0,0.853153002140936,1.62565670302307,0.38660238396628,1.00841762311671,1.55664630691409,0.570676878337677,1.89811624617805,1.4822905925161,2.01068167040216,1.1937388322469,0.974820435595601,6.29173586057955,4.32276099749388,2.58883655230677,0.379335801906163,1.48523066392647,0,2.03651327845314,0.969762435838129,1.75339549725796,1.7706230394792,0.738050739898011,1.72698600625512,1.23397163921801,0.592905254174298,0.500535317148282,0.786235980452812,0.674586337154561,0.608580364165509,1.92941727801933,0.50925170356284,0.863088412352432,2.2698931748505,0.549122826376163,15.814502718009,2.60498663367952,0.312037673114561,1.01031551178845,0.717589654087649,0.482443521363367,1.29327233116623,0.37898282354097,0.814824882210129,0.339490171550376,0.938760993154008,1.00503754465089,0.952174563544055,2.73187107000918,2.20689201748667,2.21464689648775,0.956728611944923,2.62181303545181,3.10832967358612,3.18227928879325,6.03165135757089,4.89515115436839,3.44234991113325,1.10374698521893,0.321101179975584,0.937693492737625,0.163934945376675,0.757412781613119,0.631016438832513,2.73307121007647,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0,1.16902343164525,0,0.642642632843614,0.567760340833074,0.712262414669021,0.488660878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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1755 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:74306590..74306594,+ | |||
|description=CAGE_peak_at_chr1:74306590..74306594,+ | |||
|id=chr1:74306590..74306594,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.73e-09!88;UBERON:0000926!3.01e-09!193;UBERON:0004120!3.01e-09!193;UBERON:0006603!3.01e-09!193;UBERON:0004177!1.17e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,4.84e-10,35;UBERON:0003081,1.16e-09,87;UBERON:0004177,4.24e-09,29;UBERON:0005057,4.24e-09,29;UBERON:0003408,3.55e-08,24;UBERON:0000926,6.95e-08,120;UBERON:0004120,6.95e-08,120;UBERON:0006603,6.95e-08,120;UBERON:0002390,8.96e-08,45;UBERON:0003061,8.96e-08,45;UBERON:0002370,1.01e-07,23;UBERON:0000974,1.01e-07,23;UBERON:0004807,1.01e-07,23;UBERON:0005058,1.01e-07,23;UBERON:0003351,1.01e-07,23;UBERON:0009113,1.01e-07,23;UBERON:0003295,1.01e-07,23;UBERON:0009722,1.01e-07,23;UBERON:0005562,1.01e-07,23;UBERON:0007690,1.01e-07,23;UBERON:0002193,3.30e-07,48;UBERON:0002405,3.30e-07,48;UBERON:0006562,4.65e-07,24;UBERON:0001557,4.65e-07,24;UBERON:0001042,4.65e-07,24;UBERON:0008814,4.65e-07,24;UBERON:0009145,4.65e-07,24 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.700837921786577,3.22808308603941,4.92760527530834,2.80877431586392,2.91070545983358,2.15384829287408,5.30722262786738,2.97229368224591,0.999329285446988,1.61980213911861,0.699561878128147,5.52058789376916,4.2505474417779,3.81950686618227,1.19060606211498,1.98581902401771,0.783599367416806,0.95995453676044,0.91763712426868,0,0.430761996159075,0.430942465371778,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.816677425049476,4.60384793810598,3.1253413780952,2.09409497589519,4.1176204162171,6.83045484958446,1.94204141212461,0.881277725829041,1.11514624341466,1.65192076945513,0,0,0,0,0,0,4.36234775750115,1.45072428402269,4.03312558970957,0.514518872071894,1.14613375975503,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.589257170947335,0.569486723196412,0,0.227178579999552,0.529000920747499,2.6087803983151,0,0,0,0,0.448026887097336,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,0.281686839553361,2.56652954828636,0,0,0.216491041011214,1.26679932737549,1.01104889002957,1.02765491747154,2.07150306917737,1.03909497345377,0.520455980298408,0.608930956624282,0.461230994512117,0.753613202763113,1.52865319276416,0.251333182659351,2.96633961281249,1.15679485535929,4.42305275974937,0.970601099684455,1.32504911076236,1.45462575940567,1.86391761218122,0,1.04723353406728,3.0654846625031,4.07371423320129,1.19980546198682,2.92261522268049,0.449371918214468,0.915001205637253,0.753926112677186,0.521472960576829,1.02286182932132,0.20778804455956,0.162241263067758,1.42575109390443,2.86136032403214,6.06534620240819,1.26265113531884,0.520481771850815,0.229902104433473,0.540186389416048,0.60281927134286,1.36072998302656,2.0498195245576,1.21812241927647,1.03481348295606,0.862271971731369,1.13463648100692,0.351902248327898,0.657587197282725,2.22437799380478,0.696504333044333,1.64625709126355,2.18937693500343,0.702213187313235,0.772043721344145,2.84163499395593,1.24275463521301,1.17263029990548,0.720248245844059,0.23674473558521,1.37734962223183,1.3884040159864,1.86027155800326,1.07309360559848,1.5179494507732,2.79751744852917,1.80584210487005,1.05389452409612,1.60819986167866,1.53685080703735,0.536825675041487,1.47202963994889,0.617427674275707,2.31293148088659,0,0.853153002140936,1.62565670302307,0.38660238396628,1.00841762311671,1.55664630691409,0.570676878337677,1.89811624617805,1.4822905925161,2.01068167040216,1.1937388322469,0.974820435595601,6.29173586057955,4.32276099749388,2.58883655230677,0.379335801906163,1.48523066392647,0,2.03651327845314,0.969762435838129,1.75339549725796,1.7706230394792,0.738050739898011,1.72698600625512,1.23397163921801,0.592905254174298,0.500535317148282,0.786235980452812,0.674586337154561,0.608580364165509,1.92941727801933,0.50925170356284,0.863088412352432,2.2698931748505,0.549122826376163,15.814502718009,2.60498663367952,0.312037673114561,1.01031551178845,0.717589654087649,0.482443521363367,1.29327233116623,0.37898282354097,0.814824882210129,0.339490171550376,0.938760993154008,1.00503754465089,0.952174563544055,2.73187107000918,2.20689201748667,2.21464689648775,0.956728611944923,2.62181303545181,3.10832967358612,3.18227928879325,6.03165135757089,4.89515115436839,3.44234991113325,1.10374698521893,0.321101179975584,0.937693492737625,0.163934945376675,0.757412781613119,0.631016438832513,2.73307121007647,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0,1.16902343164525,0,0.642642632843614,0.567760340833074,0.712262414669021,0.488660878060728,1.15479086080775,0,0.971122544619926,2.11626489875326,1.32023555829129,0.295301892880773,0.922305443831782,1.55056975900933,1.45413491791002,1.06949213515416,1.58018378967908,1.05418608574999,1.03135543248187,0.680879211507576,0.540183282093931,0.388076051348264,0,1.06404140185364,0.535106452806212,0.987294123612726,0.913394847343798,1.64270195644597,2.96564899209348,0.882113592219848,1.15420377059036,1.45317984026315,0.663442174209714,2.26807453605959,1.31312719796049,3.78925087618806,0.370850604021019,2.22132145037209,0.82554747185289,2.03713980106683,2.0720530270516,4.51090951479383,2.28778173206523,2.20971958992012,2.23922323717853,2.07299960706636,0.954670618015114,1.26534397432454,0.406638934253697,2.05210147561422,1.46361807210128,1.09181281873089,1.34864346384821,2.23164330458407,2.35580347785627,2.20345454596048,2.4853572523477,0,0.897099276263873,0.827292452285488,1.16670713006429,0.774958940866387,1.35164900392623,0.821500670520278,1.0416350787516,1.36317147753424,1.20792060413003,1.72818003754719,2.52808896502543,1.41907650703115,1.23253148597793,1.94881234466693,0.358053391334963,1.78813219303138,2.40390899039938,3.10148007066612,3.12995994839258,2.51482461961499,1.61321896218945,2.33898913775406,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| |||
|short_description=p@chr1:74306590..74306594,+ | |||
}} |
Latest revision as of 23:48, 5 August 2015
Short description: | p@chr1:74306590..74306594, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74306590..74306594, + |
Coexpression cluster: | MCL_coexpression_mm9:1755 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 4.84e-10 | 35 |
lateral plate mesoderm | 1.16e-09 | 87 |
hemopoietic organ | 4.24e-09 | 29 |
immune organ | 4.24e-09 | 29 |
gland of gut | 3.55e-08 | 24 |
mesoderm | 6.95e-08 | 120 |
mesoderm-derived structure | 6.95e-08 | 120 |
presumptive mesoderm | 6.95e-08 | 120 |
hematopoietic system | 8.96e-08 | 45 |
blood island | 8.96e-08 | 45 |
thymus | 1.01e-07 | 23 |
neck | 1.01e-07 | 23 |
respiratory system epithelium | 1.01e-07 | 23 |
hemolymphoid system gland | 1.01e-07 | 23 |
pharyngeal epithelium | 1.01e-07 | 23 |
thymic region | 1.01e-07 | 23 |
pharyngeal gland | 1.01e-07 | 23 |
entire pharyngeal arch endoderm | 1.01e-07 | 23 |
thymus primordium | 1.01e-07 | 23 |
early pharyngeal endoderm | 1.01e-07 | 23 |
hemolymphoid system | 3.30e-07 | 48 |
immune system | 3.30e-07 | 48 |
pharynx | 4.65e-07 | 24 |
upper respiratory tract | 4.65e-07 | 24 |
chordate pharynx | 4.65e-07 | 24 |
pharyngeal arch system | 4.65e-07 | 24 |
pharyngeal region of foregut | 4.65e-07 | 24 |