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FFCP PHASE1:Mm9::chr1:173367683..173367697,+: Difference between revisions

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{{FFCP|EntrezGene=16456|HGNC=|MCL_coexpression_id=1408|UniProt=Q8VC39|association_with_transcript=0bp_to_NM_172647,uc007doo.1_5end|description=CAGE_peak_2_at_F11r_5end|id=chr1:173367683..173367697,+|ontology_enrichment_celltype=CL:0000066!4.18e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-08,25;CL:0000223,9.84e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.45e-19!130;UBERON:0000925!8.45e-19!130;UBERON:0006595!8.45e-19!130;UBERON:0001007!6.14e-18!128;UBERON:0001555!6.14e-18!128;UBERON:0007026!6.14e-18!128;UBERON:0004921!9.35e-17!126;UBERON:0004185!9.35e-17!126;UBERON:0000160!7.73e-15!43;UBERON:0000466!1.66e-14!79;UBERON:0005409!3.78e-14!59;UBERON:0002100!7.03e-11!98;UBERON:0009569!1.32e-10!66;UBERON:0005177!1.89e-10!85;UBERON:0000344!2.15e-10!15;UBERON:0000464!2.88e-09!57;UBERON:0001242!4.11e-09!13;UBERON:0000060!4.11e-09!13;UBERON:0001262!4.11e-09!13;UBERON:0004786!4.11e-09!13;UBERON:0000481!6.56e-09!230;UBERON:0003104!1.10e-07!131;UBERON:0009142!1.10e-07!131;UBERON:0004923!1.16e-07!24;UBERON:0000926!3.04e-07!193;UBERON:0004120!3.04e-07!193;UBERON:0006603!3.04e-07!193;UBERON:0003914!3.37e-07!47;UBERON:0002365!8.36e-07!25;UBERON:0002330!8.36e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.65e-17,118;UBERON:0000925,9.65e-17,118;UBERON:0006595,9.65e-17,118;UBERON:0001007,6.39e-16,116;UBERON:0001555,6.39e-16,116;UBERON:0007026,6.39e-16,116;UBERON:0004921,8.67e-15,114;UBERON:0000160,1.81e-13,31;UBERON:0005177,4.21e-13,79;UBERON:0002100,4.34e-13,90;UBERON:0005409,5.43e-12,47;UBERON:0000344,1.49e-10,15;UBERON:0009569,1.51e-10,66;UBERON:0001242,3.00e-09,13;UBERON:0001262,3.00e-09,13;UBERON:0004786,3.00e-09,13;UBERON:0004923,1.73e-07,24;UBERON:0003914,2.66e-07,47;UBERON:0002365,6.72e-07,25;UBERON:0002330,6.72e-07,25|phase1_expression=4.00372117761985,76.4256142730201,79.6248668931688,37.8080264133538,42.5761370454395,47.3419546791529,29.6688053556318,0,0,0.234064526321993,0,0,0,0.174840804837995,1.33243904726265,0.607425802169478,0.699561878128147,0.315462165358238,0.274228867211478,0,7.56885282344521,0,0,33.7584012094088,47.0289026187699,67.1851398014574,68.4911573892929,59.0391177559336,46.9357846057244,41.0809111508687,64.745309111349,3.81018404075779,3.07532393792285,0,18.4865036640816,12.3013637565284,16.9460565697766,0.837063261473815,1.5626706890476,0,0,0,0,13.7227531593379,12.0638548151222,15.7850206859046,0,0,1.31811709640683,0.58328969722285,1.1198913730029,0,0,0,0,2.82985379639542,1.71920063963254,8.25075347643908,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0.299600110518405,0.768436610643109,0.311068836925433,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0.61245399607477,0.191690942036473,0,0,1.14918604276669,0.768032666281217,0.527545150920775,0.274462930807229,0,0.558365998002762,1.12552522006336,0.45839474333043,0.294628585473668,1.13897344639282,0.931997229126503,0.227178579999552,0.529000920747499,34.204009666798,16.3480536626463,16.9992833426938,11.873470216032,11.695975514058,10.3046184032387,8.14577636764161,0,0,0,12.9575946194546,0,0,0,20.5666488960653,20.0154293725328,22.2430755806505,15.7573754012303,2.33044095282455,4.75014845007439,4.3371331691534,3.04465478312141,3.45923245884088,3.16517545160507,5.05631440683531,6.28332956648377,19.0340125155468,5.92857363371638,3.5384422077995,2.10296904931632,0.883366073841574,1.93950101254089,11.1835056730873,2.04946557908083,2.30391377494801,20.4365644166873,1.55759661857696,0.599902730993408,1.01656181658452,0.449371918214468,1.37250180845588,0.125654352112864,0.695297280769106,0.255715457330331,1.45451631191692,1.46017136760982,8.24898847187562,5.59831367745419,12.1306924048164,7.36546495602659,2.34216797332867,0.919608417733892,0.720248519221397,3.0140963567143,0.612328492361951,1.15302348256365,1.87403449119458,2.32833033665114,1.94011193639558,2.45837904218165,3.34307135911503,2.19195732427575,5.83899223373756,4.52727816478817,6.58502836505419,8.16040493955822,0,0,0,5.38527008592305,3.98694301967864,5.76198596675248,5.20838418287463,4.72234156193769,8.94749254746794,6.27841650826101,5.09719462659276,8.52386999280337,7.24063339619314,11.4917224855367,8.83650024049827,9.0643992203706,7.68425403518677,8.18659154438268,0.841159794256509,0.720332286654991,32.711459515396,16.1314845664762,4.26576501070468,4.41249676534833,7.60318021800351,7.86565746031036,5.33707305227689,9.70150693174052,19.9302205848695,12.6818195137488,13.069430857614,12.1363447945102,13.062593836981,19.7740269903929,25.9365659849633,28.2780608021201,7.58671603812327,7.99739588268102,6.76246414038483,8.14605311381257,6.7883370508669,11.01132372278,10.3707920883782,13.1373031701846,14.9148791449306,13.6970851953199,14.8226313543574,2.8363667971736,2.94838492669805,3.37293168577281,5.27436315610108,6.27060615356284,7.38414970166117,7.48009957372108,21.4018499343047,16.1991233780968,27.3159592401974,16.7463426450827,17.1620720213008,1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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16456
|HGNC=
|MCL_coexpression_id=1408
|TSSclassifier=NA
|UniProt=Q8VC39
|association_with_transcript=0bp_to_NM_172647,uc007doo.1_5end
|cluster_id=chr1:173367683..173367697,+
|description=CAGE_peak_2_at_F11r_5end
|id=chr1:173367683..173367697,+
|ontology_enrichment_celltype=CL:0000066!4.18e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-08,25;CL:0000223,9.84e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.65e-17,118;UBERON:0000925,9.65e-17,118;UBERON:0006595,9.65e-17,118;UBERON:0001007,6.39e-16,116;UBERON:0001555,6.39e-16,116;UBERON:0007026,6.39e-16,116;UBERON:0004921,8.67e-15,114;UBERON:0000160,1.81e-13,31;UBERON:0005177,4.21e-13,79;UBERON:0002100,4.34e-13,90;UBERON:0005409,5.43e-12,47;UBERON:0000344,1.49e-10,15;UBERON:0009569,1.51e-10,66;UBERON:0001242,3.00e-09,13;UBERON:0001262,3.00e-09,13;UBERON:0004786,3.00e-09,13;UBERON:0004923,1.73e-07,24;UBERON:0003914,2.66e-07,47;UBERON:0002365,6.72e-07,25;UBERON:0002330,6.72e-07,25
|phase1_expression=4.00372117761985,76.4256142730201,79.6248668931688,37.8080264133538,42.5761370454395,47.3419546791529,29.6688053556318,0,0,0.234064526321993,0,0,0,0.174840804837995,1.33243904726265,0.607425802169478,0.699561878128147,0.315462165358238,0.274228867211478,0,7.56885282344521,0,0,33.7584012094088,47.0289026187699,67.1851398014574,68.4911573892929,59.0391177559336,46.9357846057244,41.0809111508687,64.745309111349,3.81018404075779,3.07532393792285,0,18.4865036640816,12.3013637565284,16.9460565697766,0.837063261473815,1.5626706890476,0,0,0,0,13.7227531593379,12.0638548151222,15.7850206859046,0,0,1.31811709640683,0.58328969722285,1.1198913730029,0,0,0,0,2.82985379639542,1.71920063963254,8.25075347643908,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0.299600110518405,0.768436610643109,0.311068836925433,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0.61245399607477,0.191690942036473,0,0,1.14918604276669,0.768032666281217,0.527545150920775,0.274462930807229,0,0.558365998002762,1.12552522006336,0.45839474333043,0.294628585473668,1.13897344639282,0.931997229126503,0.227178579999552,0.529000920747499,34.204009666798,16.3480536626463,16.9992833426938,11.873470216032,11.695975514058,10.3046184032387,8.14577636764161,0,0,0,12.9575946194546,0,0,0,20.5666488960653,20.0154293725328,22.2430755806505,15.7573754012303,2.33044095282455,4.75014845007439,4.3371331691534,3.04465478312141,3.45923245884088,3.16517545160507,5.05631440683531,6.28332956648377,19.0340125155468,5.92857363371638,3.5384422077995,2.10296904931632,0.883366073841574,1.93950101254089,11.1835056730873,2.04946557908083,2.30391377494801,20.4365644166873,1.55759661857696,0.599902730993408,1.01656181658452,0.449371918214468,1.37250180845588,0.125654352112864,0.695297280769106,0.255715457330331,1.45451631191692,1.46017136760982,8.24898847187562,5.59831367745419,12.1306924048164,7.36546495602659,2.34216797332867,0.919608417733892,0.720248519221397,3.0140963567143,0.612328492361951,1.15302348256365,1.87403449119458,2.32833033665114,1.94011193639558,2.45837904218165,3.34307135911503,2.19195732427575,5.83899223373756,4.52727816478817,6.58502836505419,8.16040493955822,0,0,0,5.38527008592305,3.98694301967864,5.76198596675248,5.20838418287463,4.72234156193769,8.94749254746794,6.27841650826101,5.09719462659276,8.52386999280337,7.24063339619314,11.4917224855367,8.83650024049827,9.0643992203706,7.68425403518677,8.18659154438268,0.841159794256509,0.720332286654991,32.711459515396,16.1314845664762,4.26576501070468,4.41249676534833,7.60318021800351,7.86565746031036,5.33707305227689,9.70150693174052,19.9302205848695,12.6818195137488,13.069430857614,12.1363447945102,13.062593836981,19.7740269903929,25.9365659849633,28.2780608021201,7.58671603812327,7.99739588268102,6.76246414038483,8.14605311381257,6.7883370508669,11.01132372278,10.3707920883782,13.1373031701846,14.9148791449306,13.6970851953199,14.8226313543574,2.8363667971736,2.94838492669805,3.37293168577281,5.27436315610108,6.27060615356284,7.38414970166117,7.48009957372108,21.4018499343047,16.1991233780968,27.3159592401974,16.7463426450827,17.1620720213008,12.1237861414614,10.0462551572271,14.9557491622644,16.812540305161,4.54779388249163,4.4000543639347,7.63852885988347,7.97946844180907,14.0705256251125,19.0434912708811,19.1230974900643,11.3497303756458,12.6234873099802,14.0320196418589,18.6804178775941,16.9231282228578,21.1187625529007,0,1.08781136763742,10.3270497333998,16.0043312856745,0.642202359951168,0.703270119553219,0,2.52470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,9.79386587937053,5.34196811001766,7.00413925220377,10.5580878702423,10.619611067197,9.22566417388929,7.86041248108353,9.43025398779491,6.20133975049623,9.53048958626175,9.30341855405596,9.08834323693764,10.3384239731569,8.21695570633122,9.48767477174989,9.28219889233682,6.12791290356818,3.24109969256358,4.78627129996192,4.50107773566344,5.14286677562593,6.42127743367454,3.9491764944509,5.17590413494819,9.62154003061212,26.6908409288413,11.9085334949679,11.7069239588451,8.7190790415789,7.53911561601948,12.6534684643325,11.3257220824092,20.9866202373493,0.741701208042039,0.683483523191411,5.77883230297023,3.70389054739423,1.13021074202815,0.683471138605126,2.0590035588587,7.30907248973578,7.69732987780119,7.32459861163446,12.4107180341965,3.95419991976419,5.48962561242491,9.07244862903131,9.19988502463662,9.82631536857799,9.03591120778299,13.8857805618564,14.3965768091216,23.4603101658145,18.0188400795208,1.12738587736838,7.62534384824292,7.94200754194069,5.63908446197738,8.13706887909706,6.42033276864957,9.74065080759758,16.1453437206498,15.7289016638566,7.9722759872582,6.33666013767304,2.8441000856536,3.64905387522296,2.56777392912068,1.55904987573354,1.07416017400489,1.19208812868759,1.56254084375959,1.47689527174577,2.01932899896295,1.447929326445,1.41156659191577,1.26695244961678,1.73181314952593,1.05189211963412,11.1097887971454,13.3191572024439,15.6102110500488,9.40153851638839,11.5913756419314,6.56888664079137,13.1869169472431,18.8644173589578,19.0597399533438,0,0.460325236507177,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0,0.51776031175182,0.830298780673413,1.99512436700516,2.39027048055788,4.37592090722929,0.838452650511929,1.65459157605013,4.88942801163553,3.5025959730612,3.20919209591815,4.54854981174835,2.78827229879264,5.09291121742406,4.96299989590377,4.22566005872137,4.07791829584854,4.76293691283074,3.70829843023538,3.08654752741928,2.47251540481984,3.82717192349433,6.85738504770831,3.37204031702741,2.38436189947321,2.90692833264657,2.82328141245992,3.9768865709088,3.47563148458268,2.89376682581627,4.34573164306758,2.80571135828869,3.08451047122853,3.64466584789585,3.27384834535751,4.49316839439301,5.20847849649082,2.99772693525535,6.78401664491684,7.95022899978704,3.25190164517034,6.83833399270498,4.86922454802885
|short_description=p2@F11r
}}

Latest revision as of 19:04, 26 September 2015

Short description:p2@F11r
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_F11r_5end
Coexpression cluster:MCL_coexpression_mm9:1408
Association with transcript: 0bp_to_NM_172647, uc007doo.1_5end
EntrezGene:F11r
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@F11r

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I576.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I679.62
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I747.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D133.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D247.03
GP2+ M cell, pool1.CNhs13228.11845-124H967.19
GP2+ M cell, pool2.CNhs13231.11846-124I168.49
GP2+ M cell, pool3.CNhs13240.11847-124I259.04
Ileum epithelium, pool1.CNhs13199.10252-104B946.94
Ileum epithelium, pool2.CNhs13232.10253-104C141.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C864.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G322.24
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I36.28
amnion, adult pregnant day17.5.CNhs10488.583-22A819.03
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H720.44
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I68.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C68.95
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I27.24
heart, neonate N10.CNhs11118.749-24G111.49
heart, neonate N16.CNhs11209.782-15G18.84
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I332.71
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F79.70
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E912.68
intestine, neonate N06.CNhs11102.688-20B813.07
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A513.06
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E325.94
intestine, neonate N30.CNhs11131.1384-42G128.28
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F88.00
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G711.01
kidney, neonate N10.CNhs11206.758-6D510.37
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F314.91
kidney, neonate N30.CNhs11203.1385-42H113.70
liver, adult pregnant day01.CNhs10466.508-5B214.82
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F421.40
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B116.81
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A614.07
lung, embryo E18.CNhs10583.1287-20I619.04
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E511.35
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E614.03
lung, neonate N20.CNhs11109.822-18A418.68
lung, neonate N25.CNhs11119.1359-25C716.92
lung, neonate N30.CNhs11133.1394-42H221.12
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I47.00
oviduct, adult pregnant day01.CNhs10500.988-6G610.56
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F49.23
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E59.43
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G326.69
prostate, adult.CNhs10470.859-1F811.91
skin, adult.CNhs10492.30-1C311.71
skin, neonate N00.CNhs11124.650-25G48.72
skin, neonate N03.CNhs11215.662-22H37.54
skin, neonate N06.CNhs11097.693-20I512.65
skin, neonate N10.CNhs11108.762-6C411.33
small intestine, neonate N16.CNhs11114.790-21I120.99
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.32
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D49.07
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A913.89
stomach, neonate N25.CNhs11104.1355-25E414.40
stomach, neonate N30.CNhs11134.1386-42I123.46
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.63
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I58.14
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B79.74
testis, neonate N07.CNhs11222.726-26I416.15
testis, neonate N10.CNhs11204.763-44D915.73
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.40
urinary bladder, adult.CNhs10481.879-12E411.59
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D518.86
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B44.87





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.26e-0825
endodermal cell9.84e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.65e-17118
endoderm9.65e-17118
presumptive endoderm9.65e-17118
digestive system6.39e-16116
digestive tract6.39e-16116
primitive gut6.39e-16116
subdivision of digestive tract8.67e-15114
intestine1.81e-1331
trunk region element4.21e-1379
trunk4.34e-1390
gastrointestinal system5.43e-1247
mucosa1.49e-1015
subdivision of trunk1.51e-1066
intestinal mucosa3.00e-0913
wall of intestine3.00e-0913
gastrointestinal system mucosa3.00e-0913
organ component layer1.73e-0724
epithelial tube2.66e-0747
exocrine gland6.72e-0725
exocrine system6.72e-0725
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