FFCP PHASE1:Hg19::chr6:20686649..20686670,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:20686649..20686670,+ | |||
|coexpression_cluster_id=C976 | |||
|description=CAGE_peak_at_chr6:20686649..20686670,+ | |||
|id=chr6:20686649..20686670,+ | |||
|ontology_enrichment_celltype=CL:0000242!4.46e-18!2;CL:0000312!9.13e-08!5;CL:0000095!2.22e-07!17;CL:0000123!2.22e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.39e-34;2!CL:0000242;8.39e-34;2!CL:0000095;3.28e-14;17!CL:0000312;3.60e-14;5!CL:0000240;5.68e-12;6!CL:0000311;5.68e-12;6!CL:0000079;5.68e-12;6!CL:0000237;5.68e-12;6!CL:0002319;4.27e-10;25!CL:0002535;1.78e-09;2!CL:0000362;2.75e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.39e-34,2;CL:0000095,3.23e-14,17;CL:0000123,3.23e-14,17;CL:0000312,3.60e-14,5;CL:0000240,5.68e-12,6;CL:0000311,5.68e-12,6;CL:0000079,5.68e-12,6;CL:0000237,5.68e-12,6;CL:0000036,5.68e-12,6;CL:0000357,5.68e-12,6;CL:0000114,5.68e-12,6;CL:0002319,4.22e-10,25;CL:0000333,1.20e-09,41;CL:0002535,1.86e-09,2;CL:0000362,2.75e-08,9;CL:0000133,8.51e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000357;5.68e-12;6!CL:0000114;5.68e-12;6!UBERON:0006238;6.26e-07;10!UBERON:0003056;7.28e-07;3 | |||
|ontology_enrichment_disease=DOID:3119!5.81e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.36e-11;14!DOID:154;2.02e-09;2!DOID:4236;2.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.36e-11,14;DOID:0050687,8.70e-11,143;DOID:305,1.87e-09,106;DOID:154,2.02e-09,2;DOID:4236,2.02e-09,2;DOID:162,3.37e-09,235;DOID:14566,5.49e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.46e-09!1;UBERON:0001961!2.46e-09!1;UBERON:0001744!2.46e-09!1;UBERON:0001735!2.46e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.78e-09;2!UBERON:0004801;1.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.86e-09,2;UBERON:0004801,1.86e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.3174303925731,0,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.96332770427808,0.291604613383254,1.04174996959975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.5259894825954,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,2.76697269872462,0,0,0,0,32.3151085006748,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.324169586009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1828584638726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.9995980558213,0,0,53.3211506215331,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:20686649..20686670,+ | |||
}} |
Latest revision as of 22:35, 30 July 2015
Short description: | p@chr6:20686649..20686670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:20686649..20686670, + |
Coexpression cluster: | C976_anaplastic_small_retinoblastoma_gastrointestinal_merkel_neuroblastoma_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.39e-34 | 2 |
neuron associated cell | 3.23e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 3.23e-14 | 17 |
keratinocyte | 3.60e-14 | 5 |
stratified squamous epithelial cell | 5.68e-12 | 6 |
keratin accumulating cell | 5.68e-12 | 6 |
stratified epithelial cell | 5.68e-12 | 6 |
keratinizing barrier epithelial cell | 5.68e-12 | 6 |
epithelial fate stem cell | 5.68e-12 | 6 |
stratified epithelial stem cell | 5.68e-12 | 6 |
surface ectodermal cell | 5.68e-12 | 6 |
neural cell | 4.22e-10 | 25 |
migratory neural crest cell | 1.20e-09 | 41 |
epithelial cell of cervix | 1.86e-09 | 2 |
epidermal cell | 2.75e-08 | 9 |
neurectodermal cell | 8.51e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.86e-09 | 2 |
cervix epithelium | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.36e-11 | 14 |
cell type cancer | 8.70e-11 | 143 |
carcinoma | 1.87e-09 | 106 |
mixed cell type cancer | 2.02e-09 | 2 |
carcinosarcoma | 2.02e-09 | 2 |
cancer | 3.37e-09 | 235 |
disease of cellular proliferation | 5.49e-09 | 239 |