FFCP PHASE1:Mm9::chr1:132723339..132723346,+: Difference between revisions
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{{FFCP|EntrezGene=18703|HGNC=|UniProt=O70570|association_with_transcript=78bp_to_ENSMUST00000027675,NM_011082,uc011wrk.1_5end|description=CAGE_peak_2_at_Pigr_5end|id=chr1:132723339..132723346,+|ontology_enrichment_celltype=CL:0000066!2.23e-12!25;CL:0002563!2.09e-11!9;CL:0002251!2.09e-11!9;CL:0000223!7.32e-11!20;CL:0000239!4.33e-08!6;CL:0000677!4.33e-08!6;CL:0000212!4.33e-08!6;CL:0000584!4.33e-08!6;CL:0000181!1.93e-07!5;CL:0000417!1.93e-07!5;CL:0000668!1.93e-07!5;CL:0000412!1.93e-07!5;CL:0000182!1.93e-07!5;CL:0000075!8.94e-07!7|ontology_enrichment_celltype_v019_2=CL:0000066,4.51e-16,25;CL:0002563,2.03e-15,9;CL:0002251,2.03e-15,9;CL:0000223,1.28e-13,20;CL:0000239,9.38e-11,6;CL:0000677,9.38e-11,6;CL:0000584,9.38e-11,6;CL:0000075,4.20e-09,7;CL:0002076,1.62e-08,15;CL:0000182,5.01e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.04e-19!15;UBERON:0004119!4.69e-17!130;UBERON:0000925!4.69e-17!130;UBERON:0006595!4.69e-17!130;UBERON:0001242!6.49e-17!13;UBERON:0000060!6.49e-17!13;UBERON:0001262!6.49e-17!13;UBERON:0004786!6.49e-17!13;UBERON:0001007!1.06e-16!128;UBERON:0001555!1.06e-16!128;UBERON:0007026!1.06e-16!128;UBERON:0000160!1.73e-16!43;UBERON:0004921!4.00e-15!126;UBERON:0004185!4.00e-15!126;UBERON:0004923!5.72e-13!24;UBERON:0005409!1.12e-12!59;UBERON:0003350!2.09e-11!9;UBERON:0004808!2.09e-11!9;UBERON:0001277!2.09e-11!9;UBERON:0007023!3.67e-10!51;UBERON:0000485!6.54e-09!11;UBERON:0002365!9.68e-09!25;UBERON:0002330!9.68e-09!25;UBERON:0003929!1.48e-07!55;UBERON:0005911!3.13e-07!69;UBERON:0009854!5.10e-07!23;UBERON:0009856!5.10e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-27,31;UBERON:0000344,1.81e-26,15;UBERON:0001242,3.50e-23,13;UBERON:0001262,3.50e-23,13;UBERON:0004786,3.50e-23,13;UBERON:0005409,1.19e-17,47;UBERON:0001007,2.75e-16,116;UBERON:0001555,2.75e-16,116;UBERON:0007026,2.75e-16,116;UBERON:0004119,7.55e-16,118;UBERON:0000925,7.55e-16,118;UBERON:0006595,7.55e-16,118;UBERON:0003350,2.03e-15,9;UBERON:0004808,2.03e-15,9;UBERON:0001277,2.03e-15,9;UBERON:0004923,4.86e-15,24;UBERON:0004921,2.13e-14,114;UBERON:0000485,2.82e-12,11;UBERON:0002365,1.08e-08,25;UBERON:0002330,1.08e-08,25;UBERON:0002108,1.53e-08,4;UBERON:0003929,6.69e-08,55;UBERON:0007023,1.29e-07,51;UBERON:0000331,2.68e-07,3;UBERON:0002116,2.68e-07,3;UBERON:0001204,2.68e-07,3;UBERON:0001168,2.68e-07,3|phase1_expression=0,8.37540978334467,4.54999239389536,11.4936400296595,10.5188103288733,4.19698179779725,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,9.91953021319121,8.48814339948529,9.18771142584032,9.04600191934057,7.11055067863434,30.7837939519326,34.0240675175907,10.8647950221099,0,0,0,6.35473563452804,9.97407872150954,8.77928231928187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,18.9293252935905,10.879541339324,17.810205324048,10.3964226791627,15.2329141613094,5.19644354487482,0,0,0,0,0,0,0,0,0,0,8.22123933977232,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,3.72783522436244,0,0,16.6047085885584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3460661282178,5.28901133327089,0,0,0,0,0,0.570676878337677,10.4396393539793,1.15289268306808,0.754005626400808,1.39269530428806,0.974820435595601,14.3811105384675,13.1844210423563,11.948476395262,0,0,0,0,0,0,0,0.147610147979602,0,0,17.7871576252289,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,1.26289438973556,1.97337154874103,10.6137574699941,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.863424909329478,1.15719246865209,0,0,7.86822836830458,5.51873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.64970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,2.20528398054962,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,8.03612834409116,9.32008969630389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.192423683280659,0,3.17422537061296,0,0,0,0,3.00291960721891,4.57879060668163,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p2@Pigr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18703 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=O70570 | |||
|association_with_transcript=78bp_to_ENSMUST00000027675,NM_011082,uc011wrk.1_5end | |||
|cluster_id=chr1:132723339..132723346,+ | |||
|description=CAGE_peak_2_at_Pigr_5end | |||
|id=chr1:132723339..132723346,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.23e-12!25;CL:0002563!2.09e-11!9;CL:0002251!2.09e-11!9;CL:0000223!7.32e-11!20;CL:0000239!4.33e-08!6;CL:0000677!4.33e-08!6;CL:0000212!4.33e-08!6;CL:0000584!4.33e-08!6;CL:0000181!1.93e-07!5;CL:0000417!1.93e-07!5;CL:0000668!1.93e-07!5;CL:0000412!1.93e-07!5;CL:0000182!1.93e-07!5;CL:0000075!8.94e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.51e-16,25;CL:0002563,2.03e-15,9;CL:0002251,2.03e-15,9;CL:0000223,1.28e-13,20;CL:0000239,9.38e-11,6;CL:0000677,9.38e-11,6;CL:0000584,9.38e-11,6;CL:0000075,4.20e-09,7;CL:0002076,1.62e-08,15;CL:0000182,5.01e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.04e-19!15;UBERON:0004119!4.69e-17!130;UBERON:0000925!4.69e-17!130;UBERON:0006595!4.69e-17!130;UBERON:0001242!6.49e-17!13;UBERON:0000060!6.49e-17!13;UBERON:0001262!6.49e-17!13;UBERON:0004786!6.49e-17!13;UBERON:0001007!1.06e-16!128;UBERON:0001555!1.06e-16!128;UBERON:0007026!1.06e-16!128;UBERON:0000160!1.73e-16!43;UBERON:0004921!4.00e-15!126;UBERON:0004185!4.00e-15!126;UBERON:0004923!5.72e-13!24;UBERON:0005409!1.12e-12!59;UBERON:0003350!2.09e-11!9;UBERON:0004808!2.09e-11!9;UBERON:0001277!2.09e-11!9;UBERON:0007023!3.67e-10!51;UBERON:0000485!6.54e-09!11;UBERON:0002365!9.68e-09!25;UBERON:0002330!9.68e-09!25;UBERON:0003929!1.48e-07!55;UBERON:0005911!3.13e-07!69;UBERON:0009854!5.10e-07!23;UBERON:0009856!5.10e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-27,31;UBERON:0000344,1.81e-26,15;UBERON:0001242,3.50e-23,13;UBERON:0001262,3.50e-23,13;UBERON:0004786,3.50e-23,13;UBERON:0005409,1.19e-17,47;UBERON:0001007,2.75e-16,116;UBERON:0001555,2.75e-16,116;UBERON:0007026,2.75e-16,116;UBERON:0004119,7.55e-16,118;UBERON:0000925,7.55e-16,118;UBERON:0006595,7.55e-16,118;UBERON:0003350,2.03e-15,9;UBERON:0004808,2.03e-15,9;UBERON:0001277,2.03e-15,9;UBERON:0004923,4.86e-15,24;UBERON:0004921,2.13e-14,114;UBERON:0000485,2.82e-12,11;UBERON:0002365,1.08e-08,25;UBERON:0002330,1.08e-08,25;UBERON:0002108,1.53e-08,4;UBERON:0003929,6.69e-08,55;UBERON:0007023,1.29e-07,51;UBERON:0000331,2.68e-07,3;UBERON:0002116,2.68e-07,3;UBERON:0001204,2.68e-07,3;UBERON:0001168,2.68e-07,3 | |||
|phase1_expression=0,8.37540978334467,4.54999239389536,11.4936400296595,10.5188103288733,4.19698179779725,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,9.91953021319121,8.48814339948529,9.18771142584032,9.04600191934057,7.11055067863434,30.7837939519326,34.0240675175907,10.8647950221099,0,0,0,6.35473563452804,9.97407872150954,8.77928231928187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,18.9293252935905,10.879541339324,17.810205324048,10.3964226791627,15.2329141613094,5.19644354487482,0,0,0,0,0,0,0,0,0,0,8.22123933977232,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,3.72783522436244,0,0,16.6047085885584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3460661282178,5.28901133327089,0,0,0,0,0,0.570676878337677,10.4396393539793,1.15289268306808,0.754005626400808,1.39269530428806,0.974820435595601,14.3811105384675,13.1844210423563,11.948476395262,0,0,0,0,0,0,0,0.147610147979602,0,0,17.7871576252289,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,1.26289438973556,1.97337154874103,10.6137574699941,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.863424909329478,1.15719246865209,0,0,7.86822836830458,5.51873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.64970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,2.20528398054962,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,8.03612834409116,9.32008969630389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.192423683280659,0,3.17422537061296,0,0,0,0,3.00291960721891,4.57879060668163,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p2@Pigr | |||
}} |
Latest revision as of 08:04, 26 September 2015
Short description: | p2@Pigr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pigr_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENSMUST00000027675, NM_011082, uc011wrk.1_5end |
EntrezGene: | Pigr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.51e-16 | 25 |
intestinal epithelial cell | 2.03e-15 | 9 |
epithelial cell of alimentary canal | 2.03e-15 | 9 |
endodermal cell | 1.28e-13 | 20 |
brush border epithelial cell | 9.38e-11 | 6 |
gut absorptive cell | 9.38e-11 | 6 |
enterocyte | 9.38e-11 | 6 |
columnar/cuboidal epithelial cell | 4.20e-09 | 7 |
endo-epithelial cell | 1.62e-08 | 15 |
hepatocyte | 5.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-27 | 31 |
mucosa | 1.81e-26 | 15 |
intestinal mucosa | 3.50e-23 | 13 |
wall of intestine | 3.50e-23 | 13 |
gastrointestinal system mucosa | 3.50e-23 | 13 |
gastrointestinal system | 1.19e-17 | 47 |
digestive system | 2.75e-16 | 116 |
digestive tract | 2.75e-16 | 116 |
primitive gut | 2.75e-16 | 116 |
endoderm-derived structure | 7.55e-16 | 118 |
endoderm | 7.55e-16 | 118 |
presumptive endoderm | 7.55e-16 | 118 |
epithelium of mucosa | 2.03e-15 | 9 |
gastrointestinal system epithelium | 2.03e-15 | 9 |
intestinal epithelium | 2.03e-15 | 9 |
organ component layer | 4.86e-15 | 24 |
subdivision of digestive tract | 2.13e-14 | 114 |
simple columnar epithelium | 2.82e-12 | 11 |
exocrine gland | 1.08e-08 | 25 |
exocrine system | 1.08e-08 | 25 |
small intestine | 1.53e-08 | 4 |
gut epithelium | 6.69e-08 | 55 |
adult organism | 1.29e-07 | 51 |
ileal mucosa | 2.68e-07 | 3 |
ileum | 2.68e-07 | 3 |
mucosa of small intestine | 2.68e-07 | 3 |
wall of small intestine | 2.68e-07 | 3 |