FFCP PHASE1:Mm9::chr18:36124742..36124764,+: Difference between revisions
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{{FFCP|EntrezGene=74002|HGNC=|MCL_coexpression_id=121|UniProt=Q6P1I6|association_with_transcript=253bp_to_ENSMUST00000115716,NM_028707,uc008ena.1,uc008enb.1,uc008enc.1,uc008end.1,uc012bbk.1_5end|description=CAGE_peak_2_at_Psd2_5end|id=chr18:36124742..36124764,+|ontology_enrichment_celltype=CL:0000117!3.12e-18!23;CL:0000337!3.12e-18!23;CL:0000221!2.32e-12!44;CL:0000133!2.32e-12!44;CL:0002319!3.06e-12!43;CL:0000540!1.96e-10!33;CL:0000047!1.96e-10!33;CL:0000031!1.96e-10!33;CL:0000404!1.96e-10!33;CL:0000055!6.66e-09!50;CL:0000393!1.91e-07!39;CL:0000211!1.91e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.31e-31,23;CL:0000337,6.31e-31,23;CL:0002319,8.68e-23,43;CL:0000221,4.46e-22,44;CL:0000133,4.46e-22,44;CL:0000540,1.89e-19,33;CL:0000047,1.89e-19,33;CL:0000031,1.89e-19,33;CL:0000404,1.89e-19,33;CL:0000393,2.01e-15,39;CL:0000211,2.01e-15,39;CL:0002321,7.42e-11,70;CL:0002609,6.86e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.32e-31!71;UBERON:0003075!2.32e-31!71;UBERON:0007284!2.32e-31!71;UBERON:0000033!9.89e-31!63;UBERON:0004121!1.87e-30!102;UBERON:0000924!1.87e-30!102;UBERON:0006601!1.87e-30!102;UBERON:0001017!2.94e-30!73;UBERON:0005743!2.94e-30!73;UBERON:0001049!5.54e-30!52;UBERON:0005068!5.54e-30!52;UBERON:0006241!5.54e-30!52;UBERON:0007135!5.54e-30!52;UBERON:0000073!1.34e-29!75;UBERON:0001016!1.34e-29!75;UBERON:0000955!1.93e-28!50;UBERON:0006238!1.93e-28!50;UBERON:0002616!1.23e-27!49;UBERON:0003056!4.67e-25!49;UBERON:0002020!1.13e-24!34;UBERON:0003080!2.10e-21!40;UBERON:0002791!1.07e-20!29;UBERON:0003528!1.07e-20!29;UBERON:0001893!1.07e-20!29;UBERON:0002780!1.79e-20!39;UBERON:0001890!1.79e-20!39;UBERON:0006240!1.79e-20!39;UBERON:0007811!2.16e-18!86;UBERON:0000153!3.03e-16!94;UBERON:0000956!4.79e-14!21;UBERON:0001869!4.79e-14!21;UBERON:0000203!4.79e-14!21;UBERON:0002619!1.01e-11!17;UBERON:0003076!5.74e-09!12;UBERON:0003057!5.74e-09!12;UBERON:0002420!6.82e-08!8;UBERON:0007245!6.82e-08!8;UBERON:0010009!6.82e-08!8;UBERON:0010011!6.82e-08!8;UBERON:0000454!6.82e-08!8;UBERON:0002021!9.65e-08!10;UBERON:0000411!9.65e-08!10;UBERON:0001950!9.65e-08!10;UBERON:0002298!8.34e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.76e-50,73;UBERON:0000073,1.27e-48,54;UBERON:0001016,3.82e-48,75;UBERON:0001049,1.92e-45,52;UBERON:0005068,1.92e-45,52;UBERON:0006241,1.92e-45,52;UBERON:0007135,1.92e-45,52;UBERON:0002020,2.55e-42,34;UBERON:0004121,6.03e-40,95;UBERON:0000924,6.03e-40,95;UBERON:0006601,6.03e-40,95;UBERON:0002346,2.26e-38,64;UBERON:0003075,2.26e-38,64;UBERON:0007284,2.26e-38,64;UBERON:0000955,4.72e-38,47;UBERON:0006238,4.72e-38,47;UBERON:0002616,1.04e-36,46;UBERON:0003528,2.76e-35,29;UBERON:0002791,2.76e-35,29;UBERON:0001893,2.76e-35,29;UBERON:0010371,9.99e-34,73;UBERON:0003080,2.71e-30,40;UBERON:0002780,9.69e-29,39;UBERON:0001890,9.69e-29,39;UBERON:0006240,9.69e-29,39;UBERON:0003056,2.09e-26,49;UBERON:0000956,1.57e-23,21;UBERON:0001869,1.57e-23,21;UBERON:0000203,1.57e-23,21;UBERON:0010314,5.87e-23,92;UBERON:0002619,1.96e-19,17;UBERON:0003076,4.19e-15,12;UBERON:0003057,4.19e-15,12;UBERON:0000025,2.64e-14,114;UBERON:0002420,1.06e-12,8;UBERON:0007245,1.06e-12,8;UBERON:0010009,1.06e-12,8;UBERON:0010011,1.06e-12,8;UBERON:0000454,1.06e-12,8;UBERON:0004111,1.28e-12,122;UBERON:0002021,1.95e-12,10;UBERON:0000411,1.95e-12,10;UBERON:0001950,1.95e-12,10;UBERON:0011216,2.91e-10,194;UBERON:0002240,1.68e-09,6;UBERON:0005174,1.68e-09,6;UBERON:0001137,1.68e-09,6;UBERON:0001954,2.11e-08,7;UBERON:0003022,2.11e-08,7;UBERON:0002421,2.11e-08,7;UBERON:0000349,2.11e-08,7;UBERON:0002600,2.11e-08,7;UBERON:0000369,4.35e-08,5;UBERON:0002435,4.35e-08,5;UBERON:0000204,4.35e-08,5;UBERON:0010082,4.35e-08,5;UBERON:0001948,6.57e-08,5;UBERON:0002315,6.57e-08,5;UBERON:0002950,8.47e-08,4;UBERON:0001891,8.47e-08,4;UBERON:0009616,8.47e-08,4;UBERON:0010286,8.47e-08,4;UBERON:0004733,3.27e-07,6;UBERON:0004732,3.27e-07,6;UBERON:0002028,3.27e-07,6;UBERON:0007277,3.27e-07,6;UBERON:0000483,3.49e-07,174;UBERON:0000119,5.64e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.75748946187577,1.74986909166855,1.53985063787899,0,0,0,0,0,0,0,6.87875966922632,4.7609188134483,8.87363964908651,0,0,0,0,0,3.29560121570245,6.14749288514487,1.24427534770173,1.4850653216486,1.47227472945967,3.99911378165325,4.8591079009355,1.34739879136449,1.43768206527355,1.83843757322004,8.8092704799511,8.2996769755372,6.91229399653096,5.40733779693795,7.50198677539759,3.12548022334056,11.725685958058,7.31591393041184,9.32069311438542,5.30331453852602,2.84743361598206,3.72798891650601,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,26.6430525280508,23.6674778699204,0,0,0,0,10.1857634795279,3.66000482254901,4.52355667606312,5.04090528557602,2.30143911597297,8.10373373782284,7.78758062725237,0,0,0,0.420883711772948,0.130120442962704,0.459804208866946,0.720248519221397,0.452114453507145,0.680364991513279,1.66547836370305,1.59292931751539,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,1.37968373152366,8.99083303931635,7.501547941901,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,11.6817940266621,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0.36630324853453,0,0,2.82375921308533,3.22227665555024,2.29158205375759,1.3748254587495,2.74033007908257,3.0215755895588,3.37511250115903,1.35096360967266,3.17199686288943,3.62432218226274,0.31136204275253,1.99512436700516,0.341467211508268,0.486213434136588,1.25767897576789,0.919217542250071,0.222246727801615,0.206035057238894,0.962757628775446,0.505394423527595,0,0.754505365544305,0.749132059759059,0.448176066834085,0.918967503289812,0.476293691283074,1.27472758539341,0.77163688185482,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.726732083161643,0.564656282491984,0.676916863133412,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,1.0835493061312,0.818462086339379,0.464810523557898,0.385813221962283,1.24905288968973,0.467863216890817,0,0,0,0.231867835620421|short_description=p2@Psd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74002 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P1I6 | |||
|association_with_transcript=253bp_to_ENSMUST00000115716,NM_028707,uc008ena.1,uc008enb.1,uc008enc.1,uc008end.1,uc012bbk.1_5end | |||
|cluster_id=chr18:36124742..36124764,+ | |||
|description=CAGE_peak_2_at_Psd2_5end | |||
|id=chr18:36124742..36124764,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.12e-18!23;CL:0000337!3.12e-18!23;CL:0000221!2.32e-12!44;CL:0000133!2.32e-12!44;CL:0002319!3.06e-12!43;CL:0000540!1.96e-10!33;CL:0000047!1.96e-10!33;CL:0000031!1.96e-10!33;CL:0000404!1.96e-10!33;CL:0000055!6.66e-09!50;CL:0000393!1.91e-07!39;CL:0000211!1.91e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.31e-31,23;CL:0000337,6.31e-31,23;CL:0002319,8.68e-23,43;CL:0000221,4.46e-22,44;CL:0000133,4.46e-22,44;CL:0000540,1.89e-19,33;CL:0000047,1.89e-19,33;CL:0000031,1.89e-19,33;CL:0000404,1.89e-19,33;CL:0000393,2.01e-15,39;CL:0000211,2.01e-15,39;CL:0002321,7.42e-11,70;CL:0002609,6.86e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.32e-31!71;UBERON:0003075!2.32e-31!71;UBERON:0007284!2.32e-31!71;UBERON:0000033!9.89e-31!63;UBERON:0004121!1.87e-30!102;UBERON:0000924!1.87e-30!102;UBERON:0006601!1.87e-30!102;UBERON:0001017!2.94e-30!73;UBERON:0005743!2.94e-30!73;UBERON:0001049!5.54e-30!52;UBERON:0005068!5.54e-30!52;UBERON:0006241!5.54e-30!52;UBERON:0007135!5.54e-30!52;UBERON:0000073!1.34e-29!75;UBERON:0001016!1.34e-29!75;UBERON:0000955!1.93e-28!50;UBERON:0006238!1.93e-28!50;UBERON:0002616!1.23e-27!49;UBERON:0003056!4.67e-25!49;UBERON:0002020!1.13e-24!34;UBERON:0003080!2.10e-21!40;UBERON:0002791!1.07e-20!29;UBERON:0003528!1.07e-20!29;UBERON:0001893!1.07e-20!29;UBERON:0002780!1.79e-20!39;UBERON:0001890!1.79e-20!39;UBERON:0006240!1.79e-20!39;UBERON:0007811!2.16e-18!86;UBERON:0000153!3.03e-16!94;UBERON:0000956!4.79e-14!21;UBERON:0001869!4.79e-14!21;UBERON:0000203!4.79e-14!21;UBERON:0002619!1.01e-11!17;UBERON:0003076!5.74e-09!12;UBERON:0003057!5.74e-09!12;UBERON:0002420!6.82e-08!8;UBERON:0007245!6.82e-08!8;UBERON:0010009!6.82e-08!8;UBERON:0010011!6.82e-08!8;UBERON:0000454!6.82e-08!8;UBERON:0002021!9.65e-08!10;UBERON:0000411!9.65e-08!10;UBERON:0001950!9.65e-08!10;UBERON:0002298!8.34e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.76e-50,73;UBERON:0000073,1.27e-48,54;UBERON:0001016,3.82e-48,75;UBERON:0001049,1.92e-45,52;UBERON:0005068,1.92e-45,52;UBERON:0006241,1.92e-45,52;UBERON:0007135,1.92e-45,52;UBERON:0002020,2.55e-42,34;UBERON:0004121,6.03e-40,95;UBERON:0000924,6.03e-40,95;UBERON:0006601,6.03e-40,95;UBERON:0002346,2.26e-38,64;UBERON:0003075,2.26e-38,64;UBERON:0007284,2.26e-38,64;UBERON:0000955,4.72e-38,47;UBERON:0006238,4.72e-38,47;UBERON:0002616,1.04e-36,46;UBERON:0003528,2.76e-35,29;UBERON:0002791,2.76e-35,29;UBERON:0001893,2.76e-35,29;UBERON:0010371,9.99e-34,73;UBERON:0003080,2.71e-30,40;UBERON:0002780,9.69e-29,39;UBERON:0001890,9.69e-29,39;UBERON:0006240,9.69e-29,39;UBERON:0003056,2.09e-26,49;UBERON:0000956,1.57e-23,21;UBERON:0001869,1.57e-23,21;UBERON:0000203,1.57e-23,21;UBERON:0010314,5.87e-23,92;UBERON:0002619,1.96e-19,17;UBERON:0003076,4.19e-15,12;UBERON:0003057,4.19e-15,12;UBERON:0000025,2.64e-14,114;UBERON:0002420,1.06e-12,8;UBERON:0007245,1.06e-12,8;UBERON:0010009,1.06e-12,8;UBERON:0010011,1.06e-12,8;UBERON:0000454,1.06e-12,8;UBERON:0004111,1.28e-12,122;UBERON:0002021,1.95e-12,10;UBERON:0000411,1.95e-12,10;UBERON:0001950,1.95e-12,10;UBERON:0011216,2.91e-10,194;UBERON:0002240,1.68e-09,6;UBERON:0005174,1.68e-09,6;UBERON:0001137,1.68e-09,6;UBERON:0001954,2.11e-08,7;UBERON:0003022,2.11e-08,7;UBERON:0002421,2.11e-08,7;UBERON:0000349,2.11e-08,7;UBERON:0002600,2.11e-08,7;UBERON:0000369,4.35e-08,5;UBERON:0002435,4.35e-08,5;UBERON:0000204,4.35e-08,5;UBERON:0010082,4.35e-08,5;UBERON:0001948,6.57e-08,5;UBERON:0002315,6.57e-08,5;UBERON:0002950,8.47e-08,4;UBERON:0001891,8.47e-08,4;UBERON:0009616,8.47e-08,4;UBERON:0010286,8.47e-08,4;UBERON:0004733,3.27e-07,6;UBERON:0004732,3.27e-07,6;UBERON:0002028,3.27e-07,6;UBERON:0007277,3.27e-07,6;UBERON:0000483,3.49e-07,174;UBERON:0000119,5.64e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.75748946187577,1.74986909166855,1.53985063787899,0,0,0,0,0,0,0,6.87875966922632,4.7609188134483,8.87363964908651,0,0,0,0,0,3.29560121570245,6.14749288514487,1.24427534770173,1.4850653216486,1.47227472945967,3.99911378165325,4.8591079009355,1.34739879136449,1.43768206527355,1.83843757322004,8.8092704799511,8.2996769755372,6.91229399653096,5.40733779693795,7.50198677539759,3.12548022334056,11.725685958058,7.31591393041184,9.32069311438542,5.30331453852602,2.84743361598206,3.72798891650601,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,26.6430525280508,23.6674778699204,0,0,0,0,10.1857634795279,3.66000482254901,4.52355667606312,5.04090528557602,2.30143911597297,8.10373373782284,7.78758062725237,0,0,0,0.420883711772948,0.130120442962704,0.459804208866946,0.720248519221397,0.452114453507145,0.680364991513279,1.66547836370305,1.59292931751539,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,1.37968373152366,8.99083303931635,7.501547941901,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,11.6817940266621,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0.36630324853453,0,0,2.82375921308533,3.22227665555024,2.29158205375759,1.3748254587495,2.74033007908257,3.0215755895588,3.37511250115903,1.35096360967266,3.17199686288943,3.62432218226274,0.31136204275253,1.99512436700516,0.341467211508268,0.486213434136588,1.25767897576789,0.919217542250071,0.222246727801615,0.206035057238894,0.962757628775446,0.505394423527595,0,0.754505365544305,0.749132059759059,0.448176066834085,0.918967503289812,0.476293691283074,1.27472758539341,0.77163688185482,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.726732083161643,0.564656282491984,0.676916863133412,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,1.0835493061312,0.818462086339379,0.464810523557898,0.385813221962283,1.24905288968973,0.467863216890817,0,0,0,0.231867835620421 | |||
|short_description=p2@Psd2 | |||
}} |
Latest revision as of 05:07, 27 September 2015
Short description: | p2@Psd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 253bp_to_ENSMUST00000115716, NM_028707, uc008ena.1, uc008enb.1, uc008enc.1, uc008end.1, uc012bbk.1_5end |
EntrezGene: | Psd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.31e-31 | 23 |
neuroblast (sensu Vertebrata) | 6.31e-31 | 23 |
neural cell | 8.68e-23 | 43 |
ectodermal cell | 4.46e-22 | 44 |
neurectodermal cell | 4.46e-22 | 44 |
neuron | 1.89e-19 | 33 |
neuronal stem cell | 1.89e-19 | 33 |
neuroblast | 1.89e-19 | 33 |
electrically signaling cell | 1.89e-19 | 33 |
electrically responsive cell | 2.01e-15 | 39 |
electrically active cell | 2.01e-15 | 39 |
embryonic cell | 7.42e-11 | 70 |
neuron of cerebral cortex | 6.86e-07 | 6 |