FFCP PHASE1:Hg19::chr5:180670839..180670850,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4399 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000515417_5end | |||
|cluster_id=chr5:180670839..180670850,- | |||
|coexpression_cluster_id=C2409 | |||
|description=CAGE_peak_2_at_GNB2L1_5end | |||
|id=chr5:180670839..180670850,- | |||
|ontology_enrichment_celltype=CL:0000548!2.32e-48!679;CL:0000004!2.32e-48!679;CL:0000255!2.32e-48!679;CL:0000012!6.93e-48!682;CL:0002321!6.27e-35!248;CL:0000220!2.33e-34!246;CL:0000003!8.43e-32!722;CL:0000144!5.46e-29!625;CL:0000066!2.26e-27!254;CL:0002371!4.77e-23!591;CL:0000222!2.24e-17!119;CL:0000063!1.61e-16!578;CL:0000055!1.24e-15!180;CL:0000393!7.45e-13!60;CL:0000211!7.45e-13!60;CL:0000680!6.17e-12!57;CL:0000056!6.17e-12!57;CL:0000355!6.17e-12!57;CL:0000192!1.80e-11!42;CL:0000514!1.80e-11!42;CL:0000076!1.94e-11!62;CL:0000187!2.34e-11!54;CL:0000183!3.19e-11!59;CL:0000359!5.01e-11!32;CL:0000221!6.67e-08!71;CL:0000223!3.65e-07!59;CL:0002076!6.33e-07!43;CL:0000071!9.78e-07!18;CL:0002546!9.78e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.87e-10;32!CL:0000192;1.20e-08;43!CL:0000393;9.39e-07;61!CL:0000211;9.39e-07;61!CL:0000187;9.40e-07;55!CL:0000071;9.89e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.05e-35,250;CL:0000066,2.12e-27,253;CL:0000222,9.75e-18,121;CL:0000393,8.69e-13,61;CL:0000211,8.69e-13,61;CL:0000680,7.14e-12,58;CL:0000056,7.14e-12,58;CL:0000355,7.14e-12,58;CL:0000076,1.23e-11,63;CL:0000192,2.28e-11,43;CL:0000514,2.28e-11,43;CL:0000187,2.71e-11,55;CL:0000359,4.97e-11,32;CL:0000221,4.43e-08,72;CL:0000223,5.46e-07,58;CL:0002076,9.59e-07,42;CL:0000071,9.74e-07,18;CL:0002546,9.74e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;1.20e-08;43!CL:0000355;8.36e-07;58!CL:0002546;9.89e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!4.41e-15!239;DOID:162!5.29e-14!235;DOID:0050686!1.02e-07!137;DOID:305!4.20e-07!106;DOID:2531!5.79e-07!51;DOID:0060083!5.79e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.36e-15,239;DOID:162,5.24e-14,235;DOID:0050686,1.02e-07,137;DOID:305,4.18e-07,106;DOID:2531,5.76e-07,51;DOID:0060083,5.76e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.17e-15!42;UBERON:0003509!3.17e-15!42;UBERON:0004572!3.17e-15!42;UBERON:0001981!3.27e-13!60;UBERON:0007500!3.27e-13!60;UBERON:0004537!3.27e-13!60;UBERON:0006965!3.27e-13!60;UBERON:0002049!5.80e-13!79;UBERON:0007798!5.80e-13!79;UBERON:0003914!7.95e-13!118;UBERON:0000055!9.68e-13!69;UBERON:0003104!2.21e-12!238;UBERON:0009142!2.21e-12!238;UBERON:0000490!5.13e-12!138;UBERON:0000486!8.40e-12!82;UBERON:0004573!1.80e-11!33;UBERON:0004571!1.80e-11!33;UBERON:0004290!2.14e-11!70;UBERON:0002100!8.50e-11!216;UBERON:0004872!8.51e-11!84;UBERON:0000914!1.76e-10!83;UBERON:0002329!1.76e-10!83;UBERON:0003077!1.76e-10!83;UBERON:0003059!1.76e-10!83;UBERON:0007282!1.76e-10!83;UBERON:0009618!1.76e-10!83;UBERON:0007285!1.76e-10!83;UBERON:0005256!9.70e-10!143;UBERON:0001134!1.81e-09!61;UBERON:0002036!1.81e-09!61;UBERON:0003082!1.81e-09!61;UBERON:0004535!1.04e-08!110;UBERON:0002385!3.57e-08!63;UBERON:0001015!3.57e-08!63;UBERON:0000383!3.57e-08!63;UBERON:0001009!1.35e-07!113;UBERON:0001986!9.78e-07!18;UBERON:0004638!9.78e-07!18;UBERON:0004852!9.78e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.54e-11;42!UBERON:0003509;4.54e-11;42!UBERON:0004572;4.54e-11;42!UBERON:0004573;2.43e-10;33!UBERON:0004571;2.43e-10;33!UBERON:0007500;8.52e-10;56!UBERON:0001981;8.52e-10;56!UBERON:0004537;8.52e-10;56!UBERON:0003914;1.01e-08;74!UBERON:0000055;1.73e-07;65!UBERON:0000025;7.99e-07;93!UBERON:0000490;8.15e-07;33!UBERON:0004638;9.89e-07;18!UBERON:0001986;9.89e-07;18!UBERON:0004852;9.89e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.63e-15,42;UBERON:0003509,3.63e-15,42;UBERON:0004572,3.63e-15,42;UBERON:0000490,5.91e-14,148;UBERON:0007500,8.79e-14,59;UBERON:0001981,8.79e-14,59;UBERON:0004537,8.79e-14,59;UBERON:0006965,8.79e-14,59;UBERON:0002049,1.97e-13,78;UBERON:0007798,1.97e-13,78;UBERON:0000055,3.02e-13,68;UBERON:0003914,8.84e-13,117;UBERON:0007503,1.73e-12,78;UBERON:0000486,8.07e-12,83;UBERON:0002100,1.03e-11,199;UBERON:0004573,2.05e-11,33;UBERON:0004571,2.05e-11,33;UBERON:0002329,2.10e-11,71;UBERON:0003059,2.10e-11,71;UBERON:0007282,2.10e-11,71;UBERON:0004290,2.10e-11,71;UBERON:0009618,2.10e-11,71;UBERON:0004872,3.60e-11,83;UBERON:0003077,1.03e-10,72;UBERON:0007285,1.03e-10,72;UBERON:0007524,1.58e-10,73;UBERON:0001134,1.77e-09,62;UBERON:0002036,1.77e-09,62;UBERON:0003082,1.77e-09,62;UBERON:0004535,5.61e-09,109;UBERON:0005256,1.63e-08,122;UBERON:0002385,3.32e-08,64;UBERON:0001015,3.32e-08,64;UBERON:0000383,3.32e-08,64;UBERON:0003104,4.82e-08,160;UBERON:0009142,4.82e-08,160;UBERON:0001009,7.86e-08,112;UBERON:0004638,9.74e-07,18;UBERON:0001986,9.74e-07,18;UBERON:0004852,9.74e-07,18 | |||
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| |||
|short_description=p2@GNB2L1 | |||
}} |
Latest revision as of 12:05, 17 September 2015
Short description: | p2@GNB2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNB2L1_5end |
Coexpression cluster: | C2409_embryonic_Mallassezderived_acute_Endothelial_Smooth_mucinous_iPS |
Association with transcript: | 21bp_to_ENST00000515417_5end |
EntrezGene: | GNB2L1 |
HGNC: | 4399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.05e-35 | 250 |
epithelial cell | 2.12e-27 | 253 |
mesodermal cell | 9.75e-18 | 121 |
electrically responsive cell | 8.69e-13 | 61 |
electrically active cell | 8.69e-13 | 61 |
muscle precursor cell | 7.14e-12 | 58 |
myoblast | 7.14e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.14e-12 | 58 |
squamous epithelial cell | 1.23e-11 | 63 |
smooth muscle cell | 2.28e-11 | 43 |
smooth muscle myoblast | 2.28e-11 | 43 |
muscle cell | 2.71e-11 | 55 |
vascular associated smooth muscle cell | 4.97e-11 | 32 |
ectodermal cell | 4.43e-08 | 72 |
endodermal cell | 5.46e-07 | 58 |
endo-epithelial cell | 9.59e-07 | 42 |
blood vessel endothelial cell | 9.74e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.74e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.36e-15 | 239 |
cancer | 5.24e-14 | 235 |
organ system cancer | 1.02e-07 | 137 |
carcinoma | 4.18e-07 | 106 |
hematologic cancer | 5.76e-07 | 51 |
immune system cancer | 5.76e-07 | 51 |