FFCP PHASE1:Mm9::chr17:37035055..37035074,+: Difference between revisions
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{{FFCP|EntrezGene=224762|HGNC=|MCL_coexpression_id=12|UniProt=Q8R0K2|association_with_transcript=0bp_to_ENSMUST00000078438,NM_146077,uc008cll.1_5end|description=CAGE_peak_1_at_Trim31_5end|id=chr17:37035055..37035074,+|ontology_enrichment_celltype=CL:0002563!7.85e-11!9;CL:0002251!7.85e-11!9;CL:0000239!2.70e-08!6;CL:0000677!2.70e-08!6;CL:0000212!2.70e-08!6;CL:0000584!2.70e-08!6;CL:0000075!6.82e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,2.41e-13,9;CL:0002251,2.41e-13,9;CL:0000239,4.00e-10,6;CL:0000677,4.00e-10,6;CL:0000584,4.00e-10,6;CL:0000075,1.67e-08,7;CL:0002076,4.25e-07,15;CL:0000066,9.93e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.55e-22!43;UBERON:0005409!8.06e-21!59;UBERON:0000344!1.67e-17!15;UBERON:0001242!2.17e-15!13;UBERON:0000060!2.17e-15!13;UBERON:0001262!2.17e-15!13;UBERON:0004786!2.17e-15!13;UBERON:0004923!3.76e-11!24;UBERON:0003350!7.85e-11!9;UBERON:0004808!7.85e-11!9;UBERON:0001277!7.85e-11!9;UBERON:0000485!2.32e-08!11;UBERON:0004119!9.97e-08!130;UBERON:0000925!9.97e-08!130;UBERON:0006595!9.97e-08!130;UBERON:0001007!1.39e-07!128;UBERON:0001555!1.39e-07!128;UBERON:0007026!1.39e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.76e-37,31;UBERON:0005409,1.38e-26,47;UBERON:0000344,7.83e-22,15;UBERON:0001242,3.85e-19,13;UBERON:0001262,3.85e-19,13;UBERON:0004786,3.85e-19,13;UBERON:0003350,2.41e-13,9;UBERON:0004808,2.41e-13,9;UBERON:0001277,2.41e-13,9;UBERON:0004923,6.88e-12,24;UBERON:0000485,1.72e-10,11;UBERON:0002108,4.80e-07,4|phase1_expression=0,149.710449877286,138.319768774419,188.435203644155,185.331420080148,66.4801916771084,71.2518553816353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.1157794959275,92.2225309890024,120.588712464154,125.351740882291,118.509177977239,148.408290595428,111.649347483649,77.8274092400119,0,0,0,23.3969811998532,21.942973187321,15.5168710759401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,24.663718019317,0,0,0,0,0,0,0,0.251333182659351,0.494389935468748,0,0,0,0,0,18.6391761218122,0,0,102.949193249062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,280.195127970261,134.869788998408,0.213288250535234,0,10.5671318284117,24.6053900040478,25.1287189544703,37.2842227180616,94.9058123089023,44.1393198660349,43.4809911224466,34.0215567190368,41.9172787306108,106.959509629852,95.5330180446148,90.8084206039915,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906970670894253,0,0,0,17.573123935439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,89.4846168453642,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,3.78018692876304,0.836353184057875,3.9305261474312,0.404593039154462,0.41326727862668,0,54.6975187291366,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,1.2869045591501,1.77797382241292,0.618105171716683,1.92551525755089,1.01078884705519,1.52087579934144,1.69763707247469,1.96647165686753,2.43295579138503,2.35485422718014,0.952587382566147,1.62238056322798,1.54327376370964,1.23625770240992,1.17759136107518,1.02860775715625,2.30718548007139,2.38436189947321,2.32554266611726,2.4468438907986,2.5384382367503,1.64635175585495,2.10455769150274,2.44447404922551,0.561142271657738,0.949080144993393,1.47756723563345,3.27384834535751,1.70430525304563,1.73615949883027,0,2.57324769289949,2.57845264857958,0,0,0|short_description=p1@Trim31}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224762 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R0K2 | |||
|association_with_transcript=0bp_to_ENSMUST00000078438,NM_146077,uc008cll.1_5end | |||
|cluster_id=chr17:37035055..37035074,+ | |||
|description=CAGE_peak_1_at_Trim31_5end | |||
|id=chr17:37035055..37035074,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.85e-11!9;CL:0002251!7.85e-11!9;CL:0000239!2.70e-08!6;CL:0000677!2.70e-08!6;CL:0000212!2.70e-08!6;CL:0000584!2.70e-08!6;CL:0000075!6.82e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.41e-13,9;CL:0002251,2.41e-13,9;CL:0000239,4.00e-10,6;CL:0000677,4.00e-10,6;CL:0000584,4.00e-10,6;CL:0000075,1.67e-08,7;CL:0002076,4.25e-07,15;CL:0000066,9.93e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.55e-22!43;UBERON:0005409!8.06e-21!59;UBERON:0000344!1.67e-17!15;UBERON:0001242!2.17e-15!13;UBERON:0000060!2.17e-15!13;UBERON:0001262!2.17e-15!13;UBERON:0004786!2.17e-15!13;UBERON:0004923!3.76e-11!24;UBERON:0003350!7.85e-11!9;UBERON:0004808!7.85e-11!9;UBERON:0001277!7.85e-11!9;UBERON:0000485!2.32e-08!11;UBERON:0004119!9.97e-08!130;UBERON:0000925!9.97e-08!130;UBERON:0006595!9.97e-08!130;UBERON:0001007!1.39e-07!128;UBERON:0001555!1.39e-07!128;UBERON:0007026!1.39e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.76e-37,31;UBERON:0005409,1.38e-26,47;UBERON:0000344,7.83e-22,15;UBERON:0001242,3.85e-19,13;UBERON:0001262,3.85e-19,13;UBERON:0004786,3.85e-19,13;UBERON:0003350,2.41e-13,9;UBERON:0004808,2.41e-13,9;UBERON:0001277,2.41e-13,9;UBERON:0004923,6.88e-12,24;UBERON:0000485,1.72e-10,11;UBERON:0002108,4.80e-07,4 | |||
|phase1_expression=0,149.710449877286,138.319768774419,188.435203644155,185.331420080148,66.4801916771084,71.2518553816353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.1157794959275,92.2225309890024,120.588712464154,125.351740882291,118.509177977239,148.408290595428,111.649347483649,77.8274092400119,0,0,0,23.3969811998532,21.942973187321,15.5168710759401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,24.663718019317,0,0,0,0,0,0,0,0.251333182659351,0.494389935468748,0,0,0,0,0,18.6391761218122,0,0,102.949193249062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,280.195127970261,134.869788998408,0.213288250535234,0,10.5671318284117,24.6053900040478,25.1287189544703,37.2842227180616,94.9058123089023,44.1393198660349,43.4809911224466,34.0215567190368,41.9172787306108,106.959509629852,95.5330180446148,90.8084206039915,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906970670894253,0,0,0,17.573123935439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,89.4846168453642,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,3.78018692876304,0.836353184057875,3.9305261474312,0.404593039154462,0.41326727862668,0,54.6975187291366,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,1.2869045591501,1.77797382241292,0.618105171716683,1.92551525755089,1.01078884705519,1.52087579934144,1.69763707247469,1.96647165686753,2.43295579138503,2.35485422718014,0.952587382566147,1.62238056322798,1.54327376370964,1.23625770240992,1.17759136107518,1.02860775715625,2.30718548007139,2.38436189947321,2.32554266611726,2.4468438907986,2.5384382367503,1.64635175585495,2.10455769150274,2.44447404922551,0.561142271657738,0.949080144993393,1.47756723563345,3.27384834535751,1.70430525304563,1.73615949883027,0,2.57324769289949,2.57845264857958,0,0,0 | |||
|short_description=p1@Trim31 | |||
}} |
Latest revision as of 11:18, 26 September 2015
Short description: | p1@Trim31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim31_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000078438, NM_146077, uc008cll.1_5end |
EntrezGene: | Trim31 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.41e-13 | 9 |
epithelial cell of alimentary canal | 2.41e-13 | 9 |
brush border epithelial cell | 4.00e-10 | 6 |
gut absorptive cell | 4.00e-10 | 6 |
enterocyte | 4.00e-10 | 6 |
columnar/cuboidal epithelial cell | 1.67e-08 | 7 |
endo-epithelial cell | 4.25e-07 | 15 |
epithelial cell | 9.93e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.76e-37 | 31 |
gastrointestinal system | 1.38e-26 | 47 |
mucosa | 7.83e-22 | 15 |
intestinal mucosa | 3.85e-19 | 13 |
wall of intestine | 3.85e-19 | 13 |
gastrointestinal system mucosa | 3.85e-19 | 13 |
epithelium of mucosa | 2.41e-13 | 9 |
gastrointestinal system epithelium | 2.41e-13 | 9 |
intestinal epithelium | 2.41e-13 | 9 |
organ component layer | 6.88e-12 | 24 |
simple columnar epithelium | 1.72e-10 | 11 |
small intestine | 4.80e-07 | 4 |