FFCP PHASE1:Mm9::chr17:34741874..34741896,+: Difference between revisions
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{{FFCP|EntrezGene=55979|HGNC=|MCL_coexpression_id=493|UniProt=G3UYV9|association_with_transcript=85bp_to_ENSMUST00000173242_5end|description=CAGE_peak_8_at_Agpat1_5end|id=chr17:34741874..34741896,+|ontology_enrichment_celltype=CL:0002563!7.50e-08!9;CL:0002251!7.50e-08!9;CL:0000239!8.99e-08!6;CL:0000677!8.99e-08!6;CL:0000212!8.99e-08!6;CL:0000584!8.99e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.10e-14,6;CL:0000677,1.10e-14,6;CL:0000584,1.10e-14,6;CL:0000075,1.73e-12,7;CL:0002563,1.48e-09,9;CL:0002251,1.48e-09,9;CL:0000682,1.65e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.97e-18!43;UBERON:0005409!8.87e-18!59;UBERON:0000344!2.91e-14!15;UBERON:0001242!3.72e-12!13;UBERON:0000060!3.72e-12!13;UBERON:0001262!3.72e-12!13;UBERON:0004786!3.72e-12!13;UBERON:0003350!7.50e-08!9;UBERON:0004808!7.50e-08!9;UBERON:0001277!7.50e-08!9;UBERON:0004923!3.35e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.46e-42,31;UBERON:0005409,2.22e-30,47;UBERON:0000344,3.11e-22,15;UBERON:0001242,5.78e-18,13;UBERON:0001262,5.78e-18,13;UBERON:0004786,5.78e-18,13;UBERON:0004923,6.71e-13,24;UBERON:0001007,7.41e-11,116;UBERON:0001555,7.41e-11,116;UBERON:0007026,7.41e-11,116;UBERON:0002108,1.32e-10,4;UBERON:0004119,1.44e-10,118;UBERON:0000925,1.44e-10,118;UBERON:0006595,1.44e-10,118;UBERON:0003350,1.48e-09,9;UBERON:0004808,1.48e-09,9;UBERON:0001277,1.48e-09,9;UBERON:0004921,4.55e-09,114;UBERON:0000331,3.10e-08,3;UBERON:0002116,3.10e-08,3;UBERON:0001204,3.10e-08,3;UBERON:0001168,3.10e-08,3;UBERON:0000485,1.08e-07,11|phase1_expression=0,16.40184415905,15.9249733786338,9.67885476181856,10.0179145989269,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.1996590257033,11.0116454912242,14.3557991028755,12.4920978886132,8.40337807474967,12.3515222646643,10.837295579677,2.88249663851896,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,10.2182822083437,0,0,0,0.449371918214468,0,0,0,0,0,0.162241263067758,0,0,0,34.0915806536088,0,0,0,0,0.0680364991513279,0,0,7.76110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,37.667741260153,16.6603856998033,0,0,0.128867461322093,1.21010114774006,0.444756087689741,3.23383564391351,15.6594590309689,3.29397909448022,2.5133520880027,2.18852119245266,1.16978452271472,18.8752075817387,15.9942156907274,10.5544874824815,0,0,0,0,0,0.911765658574141,0.126473074248515,0.738050739898011,0.784993639206874,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97863503529776,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.0826534557253359,1.04702376793612,1.55537967950151,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.256100609619477,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.463735671240843|short_description=p8@Agpat1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55979 | |||
|HGNC= | |||
|MCL_coexpression_id=493 | |||
|TSSclassifier=NA | |||
|UniProt=G3UYV9 | |||
|association_with_transcript=85bp_to_ENSMUST00000173242_5end | |||
|cluster_id=chr17:34741874..34741896,+ | |||
|description=CAGE_peak_8_at_Agpat1_5end | |||
|id=chr17:34741874..34741896,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.50e-08!9;CL:0002251!7.50e-08!9;CL:0000239!8.99e-08!6;CL:0000677!8.99e-08!6;CL:0000212!8.99e-08!6;CL:0000584!8.99e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.10e-14,6;CL:0000677,1.10e-14,6;CL:0000584,1.10e-14,6;CL:0000075,1.73e-12,7;CL:0002563,1.48e-09,9;CL:0002251,1.48e-09,9;CL:0000682,1.65e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.97e-18!43;UBERON:0005409!8.87e-18!59;UBERON:0000344!2.91e-14!15;UBERON:0001242!3.72e-12!13;UBERON:0000060!3.72e-12!13;UBERON:0001262!3.72e-12!13;UBERON:0004786!3.72e-12!13;UBERON:0003350!7.50e-08!9;UBERON:0004808!7.50e-08!9;UBERON:0001277!7.50e-08!9;UBERON:0004923!3.35e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.46e-42,31;UBERON:0005409,2.22e-30,47;UBERON:0000344,3.11e-22,15;UBERON:0001242,5.78e-18,13;UBERON:0001262,5.78e-18,13;UBERON:0004786,5.78e-18,13;UBERON:0004923,6.71e-13,24;UBERON:0001007,7.41e-11,116;UBERON:0001555,7.41e-11,116;UBERON:0007026,7.41e-11,116;UBERON:0002108,1.32e-10,4;UBERON:0004119,1.44e-10,118;UBERON:0000925,1.44e-10,118;UBERON:0006595,1.44e-10,118;UBERON:0003350,1.48e-09,9;UBERON:0004808,1.48e-09,9;UBERON:0001277,1.48e-09,9;UBERON:0004921,4.55e-09,114;UBERON:0000331,3.10e-08,3;UBERON:0002116,3.10e-08,3;UBERON:0001204,3.10e-08,3;UBERON:0001168,3.10e-08,3;UBERON:0000485,1.08e-07,11 | |||
|phase1_expression=0,16.40184415905,15.9249733786338,9.67885476181856,10.0179145989269,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.1996590257033,11.0116454912242,14.3557991028755,12.4920978886132,8.40337807474967,12.3515222646643,10.837295579677,2.88249663851896,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,10.2182822083437,0,0,0,0.449371918214468,0,0,0,0,0,0.162241263067758,0,0,0,34.0915806536088,0,0,0,0,0.0680364991513279,0,0,7.76110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,37.667741260153,16.6603856998033,0,0,0.128867461322093,1.21010114774006,0.444756087689741,3.23383564391351,15.6594590309689,3.29397909448022,2.5133520880027,2.18852119245266,1.16978452271472,18.8752075817387,15.9942156907274,10.5544874824815,0,0,0,0,0,0.911765658574141,0.126473074248515,0.738050739898011,0.784993639206874,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97863503529776,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,12.8251568117134,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.0826534557253359,1.04702376793612,1.55537967950151,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.256100609619477,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.463735671240843 | |||
|short_description=p8@Agpat1 | |||
}} |
Latest revision as of 08:27, 26 September 2015
Short description: | p8@Agpat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Agpat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:493 |
Association with transcript: | 85bp_to_ENSMUST00000173242_5end |
EntrezGene: | Agpat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.10e-14 | 6 |
gut absorptive cell | 1.10e-14 | 6 |
enterocyte | 1.10e-14 | 6 |
columnar/cuboidal epithelial cell | 1.73e-12 | 7 |
intestinal epithelial cell | 1.48e-09 | 9 |
epithelial cell of alimentary canal | 1.48e-09 | 9 |
M cell of gut | 1.65e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.46e-42 | 31 |
gastrointestinal system | 2.22e-30 | 47 |
mucosa | 3.11e-22 | 15 |
intestinal mucosa | 5.78e-18 | 13 |
wall of intestine | 5.78e-18 | 13 |
gastrointestinal system mucosa | 5.78e-18 | 13 |
organ component layer | 6.71e-13 | 24 |
digestive system | 7.41e-11 | 116 |
digestive tract | 7.41e-11 | 116 |
primitive gut | 7.41e-11 | 116 |
small intestine | 1.32e-10 | 4 |
endoderm-derived structure | 1.44e-10 | 118 |
endoderm | 1.44e-10 | 118 |
presumptive endoderm | 1.44e-10 | 118 |
epithelium of mucosa | 1.48e-09 | 9 |
gastrointestinal system epithelium | 1.48e-09 | 9 |
intestinal epithelium | 1.48e-09 | 9 |
subdivision of digestive tract | 4.55e-09 | 114 |
ileal mucosa | 3.10e-08 | 3 |
ileum | 3.10e-08 | 3 |
mucosa of small intestine | 3.10e-08 | 3 |
wall of small intestine | 3.10e-08 | 3 |
simple columnar epithelium | 1.08e-07 | 11 |