FFCP PHASE1:Hg19::chrX:144903040..144903070,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:144903040..144903070,+
|short_description=p2@SLITRK2
|description=CAGE_peak_2_at_SLITRK2_5end
|association_with_transcript=174bp_to_ENST00000413937,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84631 | |EntrezGene=84631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13449 | |HGNC=13449 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H156,B3KTY4 | |UniProt=Q9H156,B3KTY4 | ||
|association_with_transcript=174bp_to_ENST00000413937,ENST00000428560,ENST00000434188,NM_001144006,NM_001144008,NM_001144009,NM_001144010,uc004fcg.2,uc011mwr.1,uc011mws.1,uc011mwt.1_5end | |||
|cluster_id=chrX:144903040..144903070,+ | |||
|coexpression_cluster_id=C271 | |||
|description=CAGE_peak_2_at_SLITRK2_5end | |||
|id=chrX:144903040..144903070,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.33e-07;3!CL:0000067;3.33e-07;3!CL:0005012;3.33e-07;3!CL:0002304;3.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.78e-07,3;CL:0000067,3.78e-07,3;CL:0005012,3.78e-07,3;CL:0002304,3.78e-07,3;CL:0000047,6.34e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.42e-20;82!UBERON:0006241;3.53e-09;3!UBERON:0003057;3.53e-09;3!UBERON:0006215;5.27e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;5.08e-61;34!UBERON:0002020;5.08e-61;34!UBERON:0001893;5.68e-61;34!UBERON:0002791;1.83e-60;32!UBERON:0001869;2.79e-60;32!UBERON:0002780;6.64e-57;41!UBERON:0001890;6.64e-57;41!UBERON:0002619;8.70e-54;22!UBERON:0000073;1.38e-52;53!UBERON:0002616;1.38e-52;53!UBERON:0000956;9.11e-51;25!UBERON:0000203;9.11e-51;25!UBERON:0001950;8.23e-49;20!UBERON:0001017;3.03e-38;75!UBERON:0000955;2.81e-36;68!UBERON:0001016;1.49e-33;83!UBERON:0000125;1.20e-22;9!UBERON:0002308;1.20e-22;9!UBERON:0002420;1.92e-22;9!UBERON:0007245;1.92e-22;9!UBERON:0010009;1.92e-22;9!UBERON:0010011;1.92e-22;9!UBERON:0000454;1.92e-22;9!UBERON:0009663;5.93e-18;7!UBERON:0004732;8.13e-18;13!UBERON:0001871;1.06e-16;6!UBERON:0004733;1.71e-15;12!UBERON:0002028;1.71e-15;12!UBERON:0000200;3.52e-15;6!UBERON:0002298;5.50e-15;6!UBERON:0007023;1.85e-14;114!UBERON:0000349;2.08e-13;5!UBERON:0002021;4.12e-13;5!UBERON:0001872;4.79e-13;5!UBERON:0011216;6.41e-12;132!UBERON:0002784;8.14e-12;4!UBERON:0010314;5.86e-11;132!UBERON:0000369;1.00e-10;4!UBERON:0002435;1.00e-10;4!UBERON:0000204;1.00e-10;4!UBERON:0001894;6.33e-10;7!UBERON:0002680;1.42e-09;9!UBERON:0001895;1.42e-09;9!UBERON:0002240;3.53e-09;3!UBERON:0005174;3.53e-09;3!UBERON:0001137;3.53e-09;3!UBERON:0000488;5.25e-09;4!UBERON:0001870;1.36e-08;3!UBERON:0000988;1.96e-08;3!UBERON:0005383;2.25e-08;3!UBERON:0005382;2.25e-08;3!UBERON:0001896;3.11e-08;3!UBERON:0005290;3.11e-08;3!UBERON:0001778;3.33e-07;3!UBERON:0001775;3.33e-07;3!UBERON:0001905;7.32e-07;2!UBERON:0002757;7.32e-07;2!UBERON:0010134;7.32e-07;2!UBERON:0005408;7.32e-07;2!UBERON:0001899;7.32e-07;2 | |||
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| ||
|short_description=p2@SLITRK2 | |||
}} | }} |
Latest revision as of 20:01, 19 September 2015
Short description: | p2@SLITRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLITRK2_5end |
Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
Association with transcript: | 174bp_to_ENST00000413937, ENST00000428560, ENST00000434188, NM_001144006, NM_001144008, NM_001144009, NM_001144010, uc004fcg.2, uc011mwr.1, uc011mws.1, uc011mwt.1_5end |
EntrezGene: | SLITRK2 |
HGNC: | 13449 |
UniProt: | Q9H156B3KTY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.78e-07 | 3 |
ciliated epithelial cell | 3.78e-07 | 3 |
multi-ciliated epithelial cell | 3.78e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.78e-07 | 3 |
neuronal stem cell | 6.34e-07 | 8 |