FFCP PHASE1:Hg19::chr5:10316445..10316475,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:10316445..10316475,+ | |||
|description=CAGE_peak_at_chr5:10316445..10316475,+ | |||
|id=chr5:10316445..10316475,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.39e-31!7;CL:0000586!2.39e-31!7;CL:0002178!5.64e-07!3;CL:0002541!9.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.90e-16;7!CL:0000586;7.90e-16;7!CL:0000083;5.07e-13;4!CL:0000054;3.48e-07;2!CL:0000137;3.48e-07;2!CL:0000092;3.48e-07;2!CL:0000123;4.83e-07;2!CL:0000242;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.19e-16,7;CL:0000586,9.19e-16,7;CL:0000083,4.78e-13,4;CL:0000054,3.09e-07,2;CL:0000137,3.09e-07,2;CL:0000092,3.09e-07,2;CL:0000242,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.15e-13;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.35e-18!143;DOID:305!2.02e-17!106;DOID:3095!5.55e-12!22;DOID:2994!5.55e-12!22;DOID:162!1.22e-10!235;DOID:14566!2.79e-10!239;DOID:3905!1.04e-08!9;DOID:0050615!3.61e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.05e-13;1!DOID:10165;2.05e-13;1!DOID:1798;2.05e-13;1!DOID:0060085;4.23e-13;1!DOID:3165;4.23e-13;1!DOID:0060121;4.23e-13;1!DOID:2438;4.23e-13;1!DOID:4418;4.23e-13;1!DOID:1793;5.07e-13;4!DOID:3905;1.66e-12;9!DOID:3908;1.50e-10;5!DOID:170;5.56e-09;6!DOID:305;7.87e-09;106!DOID:1324;1.03e-07;15!DOID:1325;1.07e-07;7!DOID:3904;1.07e-07;7!DOID:4074;2.43e-07;2!DOID:4905;2.43e-07;2!DOID:3498;2.43e-07;2!DOID:3910;2.82e-07;2!DOID:0050615;2.91e-07;16!DOID:200;3.48e-07;2!DOID:4305;3.48e-07;2!DOID:3493;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.24e-14,106;DOID:0050687,2.80e-14,143;DOID:1799,1.82e-13,1;DOID:10165,1.82e-13,1;DOID:1798,1.82e-13,1;DOID:0060085,3.33e-13,1;DOID:3165,3.33e-13,1;DOID:0060121,3.33e-13,1;DOID:2438,3.33e-13,1;DOID:4418,3.33e-13,1;DOID:1793,4.78e-13,4;DOID:3905,1.63e-12,9;DOID:3908,1.54e-10,5;DOID:162,2.85e-09,235;DOID:14566,4.90e-09,239;DOID:170,5.35e-09,6;DOID:1324,1.02e-07,15;DOID:1325,1.02e-07,7;DOID:3904,1.02e-07,7;DOID:4074,2.43e-07,2;DOID:4905,2.43e-07,2;DOID:3498,2.43e-07,2;DOID:3910,2.74e-07,2;DOID:0050615,2.88e-07,16;DOID:200,3.09e-07,2;DOID:4305,3.09e-07,2;DOID:3493,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.33e-20!8;UBERON:0003135!1.90e-14!11;UBERON:0000991!1.21e-09!21;UBERON:0009196!1.21e-09!21;UBERON:0009117!1.21e-09!21;UBERON:0005564!1.21e-09!21;UBERON:0003101!2.49e-09!22;UBERON:0000079!2.49e-09!22;UBERON:0004176!3.66e-09!22;UBERON:0000466!1.09e-08!126;UBERON:0000476!9.63e-07!3;UBERON:0000920!9.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.82e-07;2!UBERON:0002173;2.82e-07;2!UBERON:0002186;2.82e-07;2!UBERON:0000473;9.11e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.74e-07,2;UBERON:0002173,2.74e-07,2;UBERON:0002186,2.74e-07,2;UBERON:0000473,9.11e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81380475439149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.1528195219403,10.4118867515336,0.325942115766024,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60924323301195,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,2.78200456384186,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.157566364614447,0,0.606631894687664,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,8.1312259119943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,8.90482761236836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41923792260222,0,0,0,0,2.12748913591143,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,0,0,0,0,0,0,0,0.951360726220549,0,0,2.71733118420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.305966489225945,0.26721740526556,3.21632148371957,0.752122617877125,0.682008283964155,1.60778478093707,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:10316445..10316475,+ | |||
}} |
Latest revision as of 08:24, 30 July 2015
Short description: | p@chr5:10316445..10316475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:10316445..10316475, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.19e-16 | 7 |
germ cell | 9.19e-16 | 7 |
epithelial cell of pancreas | 4.78e-13 | 4 |
bone matrix secreting cell | 3.09e-07 | 2 |
osteocyte | 3.09e-07 | 2 |
osteoclast | 3.09e-07 | 2 |
Merkel cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.74e-07 | 2 |
alveolar duct | 2.74e-07 | 2 |
bronchiole | 2.74e-07 | 2 |
testis | 9.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.24e-14 | 106 |
cell type cancer | 2.80e-14 | 143 |
islet cell tumor | 1.82e-13 | 1 |
endocrine pancreas cancer | 1.82e-13 | 1 |
pancreatic endocrine carcinoma | 1.82e-13 | 1 |
organ system benign neoplasm | 3.33e-13 | 1 |
skin benign neoplasm | 3.33e-13 | 1 |
integumentary system benign neoplasm | 3.33e-13 | 1 |
dermis tumor | 3.33e-13 | 1 |
cutaneous fibrous histiocytoma | 3.33e-13 | 1 |
pancreatic cancer | 4.78e-13 | 4 |
lung carcinoma | 1.63e-12 | 9 |
non-small cell lung carcinoma | 1.54e-10 | 5 |
cancer | 2.85e-09 | 235 |
disease of cellular proliferation | 4.90e-09 | 239 |
endocrine gland cancer | 5.35e-09 | 6 |
lung cancer | 1.02e-07 | 15 |
bronchus cancer | 1.02e-07 | 7 |
bronchogenic carcinoma | 1.02e-07 | 7 |
pancreas adenocarcinoma | 2.43e-07 | 2 |
pancreatic carcinoma | 2.43e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.43e-07 | 2 |
lung adenocarcinoma | 2.74e-07 | 2 |
respiratory system cancer | 2.88e-07 | 16 |
giant cell tumor | 3.09e-07 | 2 |
bone giant cell tumor | 3.09e-07 | 2 |
signet ring cell adenocarcinoma | 4.42e-07 | 2 |