FFCP PHASE1:Hg19::chr4:8202300..8202347,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:8202300..8202347,+ | |||
|coexpression_cluster_id=C4433 | |||
|description=CAGE_peak_at_chr4:8202300..8202347,+ | |||
|id=chr4:8202300..8202347,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.16e-40!140;CL:0000037!3.95e-31!172;CL:0000566!3.95e-31!172;CL:0002087!3.99e-30!119;CL:0002031!6.83e-30!124;CL:0000988!8.61e-30!182;CL:0000838!3.30e-27!52;CL:0000542!1.56e-26!53;CL:0000051!1.56e-26!53;CL:0002032!6.96e-25!165;CL:0000837!6.96e-25!165;CL:0000236!1.57e-15!14;CL:0000624!1.10e-14!6;CL:0002393!1.47e-14!9;CL:0002397!1.47e-14!9;CL:0000945!2.43e-13!24;CL:0000826!2.43e-13!24;CL:0000791!4.11e-11!18;CL:0000789!4.11e-11!18;CL:0002420!4.11e-11!18;CL:0002419!4.11e-11!18;CL:0000790!4.11e-11!18;CL:0000084!1.47e-10!25;CL:0000827!1.47e-10!25;CL:0002057!4.34e-09!42;CL:0000766!8.55e-09!76;CL:0000784!1.29e-08!3;CL:0000134!1.46e-08!358;CL:0000898!2.64e-08!3;CL:0000860!3.13e-08!45;CL:0002320!4.06e-08!365;CL:0000623!6.11e-08!3;CL:0000825!6.11e-08!3;CL:0000557!1.01e-07!71;CL:0000875!2.80e-07!3;CL:0002396!2.80e-07!3;CL:0000842!5.82e-07!3;CL:0000839!5.86e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.08e-32;6!CL:0000784;7.13e-25;3!CL:0000898;6.75e-24;3!CL:0000815;1.80e-16;2!CL:0000792;1.80e-16;2!CL:0002677;1.80e-16;2!CL:0000236;1.25e-14;13!CL:0000542;5.31e-14;53!CL:0000623;5.15e-11;3!CL:0000791;8.16e-11;18!CL:0000789;8.16e-11;18!CL:0002419;8.16e-11;18!CL:0000895;3.44e-09;1!CL:0000945;7.60e-08;24!CL:0000084;9.97e-08;25!CL:0000451;3.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.20e-32,6;CL:0000784,7.44e-25,3;CL:0000898,7.91e-24,3;CL:0000838,2.84e-19,52;CL:0000542,7.17e-19,53;CL:0000051,7.17e-19,53;CL:0000815,2.37e-16,2;CL:0000792,2.37e-16,2;CL:0002677,2.37e-16,2;CL:0000236,1.18e-13,14;CL:0000738,1.49e-11,136;CL:0000623,5.16e-11,3;CL:0000825,5.16e-11,3;CL:0000791,8.42e-11,18;CL:0000789,8.42e-11,18;CL:0002420,8.42e-11,18;CL:0002419,8.42e-11,18;CL:0000790,8.42e-11,18;CL:0000810,3.05e-09,1;CL:0000895,3.05e-09,1;CL:0002436,3.05e-09,1;CL:0002427,3.05e-09,1;CL:0002428,3.05e-09,1;CL:0002429,3.05e-09,1;CL:0002433,3.05e-09,1;CL:0002431,3.05e-09,1;CL:0002432,3.05e-09,1;CL:0002087,6.13e-09,115;CL:0000037,8.39e-09,168;CL:0002031,1.79e-08,120;CL:0000988,3.30e-08,177;CL:0000945,6.84e-08,24;CL:0000826,6.84e-08,24;CL:0000084,1.02e-07,25;CL:0000827,1.02e-07,25;CL:0000451,3.82e-07,10;CL:0002032,8.62e-07,161;CL:0000837,8.62e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;5.31e-14;53!CL:0000790;8.16e-11;18!CL:0002427;3.44e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.67e-10!102;UBERON:0003061!8.67e-10!102;UBERON:0002193!4.35e-09!112;UBERON:0002384!5.51e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.75e-16;2!UBERON:0005058;4.75e-16;2!UBERON:0009113;4.75e-16;2!UBERON:0004177;5.99e-07;5!UBERON:0005057;5.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.25e-18,4;UBERON:0005058,6.25e-18,4;UBERON:0009113,6.25e-18,4;UBERON:0003295,6.25e-18,4;UBERON:0005562,6.25e-18,4;UBERON:0003351,3.81e-12,6;UBERON:0004177,1.74e-10,7;UBERON:0005057,1.74e-10,7;UBERON:0000974,1.75e-07,10;UBERON:0003408,1.75e-07,10;UBERON:0001042,1.75e-07,10;UBERON:0009145,1.75e-07,10;UBERON:0006562,7.66e-07,11;UBERON:0009722,7.66e-07,11;UBERON:0007690,7.66e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.619264493264304,0,0,0,0.232401601740905,0,0,0.553995408531877,0.601633342410425,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0.422510572623884,0,0.209658645508376,0.336985893439485,0,0.48217676009124,0.570025487482497,0.39783335439818,0.547992461293902,1.75996244461323,1.63841583378639,2.66852776159066,0.853460445133014,1.20118796110804,0,0,0.954053754535364,3.98449078376614,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,4.71612915298998,6.99045096598331,0.501559486172034,1.30368906653436,0.473447805734733,0,0.445641827540694,3.24066498222321,2.65840673500345,2.16643091012012,0.128091319725675,0.520237390239513,0.328875809207352,0,0,1.63115219478266,1.33770414044857,1.04535523804977,0,2.68254345521345,3.4362744548263,1.26509846009751,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29283123749616,9.15191857248205,5.57186251994347,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,1.53316637465883,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.72502059887614,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.91227394607833,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.48554492622814,1.67601728598816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr4:8202300..8202347,+ | |||
}} |
Latest revision as of 07:20, 30 July 2015
Short description: | p@chr4:8202300..8202347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:8202300..8202347, + |
Coexpression cluster: | C4433_Dendritic_CD4_lymphoma_chronic_Hepatocyte_CD19_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.25e-18 | 4 |
hemolymphoid system gland | 6.25e-18 | 4 |
thymic region | 6.25e-18 | 4 |
pharyngeal gland | 6.25e-18 | 4 |
thymus primordium | 6.25e-18 | 4 |
pharyngeal epithelium | 3.81e-12 | 6 |
hemopoietic organ | 1.74e-10 | 7 |
immune organ | 1.74e-10 | 7 |
neck | 1.75e-07 | 10 |
gland of gut | 1.75e-07 | 10 |
chordate pharynx | 1.75e-07 | 10 |
pharyngeal region of foregut | 1.75e-07 | 10 |
pharynx | 7.66e-07 | 11 |
entire pharyngeal arch endoderm | 7.66e-07 | 11 |
early pharyngeal endoderm | 7.66e-07 | 11 |