FFCP PHASE1:Hg19::chrX:131157250..131157259,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:131157250..131157259,+
|short_description=p5@MST4
|description=CAGE_peak_5_at_MST4_5end
|association_with_transcript=5bp_to_NM_001042453,NM_016542,uc004ewk...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51765 | |EntrezGene=51765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9P289,Q96SR7,Q8NBY1 | |UniProt=Q9P289,Q96SR7,Q8NBY1 | ||
|association_with_transcript=5bp_to_NM_001042453,NM_016542,uc004ewk.1,uc004ewl.1,uc010nrj.1,uc011mux.1_5end | |||
|cluster_id=chrX:131157250..131157259,+ | |||
|description=CAGE_peak_5_at_MST4_5end | |||
|id=chrX:131157250..131157259,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.17e-11!172;CL:0000566!1.17e-11!172;CL:0002032!4.46e-11!165;CL:0000837!4.46e-11!165;CL:0000988!4.40e-10!182;CL:0000738!8.93e-10!140;CL:0002031!9.81e-09!124;CL:0002087!3.48e-08!119;CL:0000066!3.00e-07!254;CL:0000838!3.65e-07!52;CL:0000542!3.86e-07!53;CL:0000051!3.86e-07!53;CL:0000945!5.59e-07!24;CL:0000826!5.59e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.18e-09;5!CL:0000945;1.26e-08;24!CL:0000082;1.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.25e-09,5;CL:0000945,1.14e-08,24;CL:0000826,1.14e-08,24;CL:0000082,5.20e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.38e-16!235;DOID:14566!4.53e-16!239;DOID:305!3.29e-15!106;DOID:0050687!2.61e-14!143;DOID:0050686!6.42e-10!137;DOID:0050615!8.09e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.06e-09;16!DOID:1324;1.99e-08;15!DOID:1325;1.97e-07;7!DOID:3904;1.97e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,3.64e-10,16;DOID:1324,7.15e-09,15;DOID:162,2.92e-08,235;DOID:1325,4.42e-08,7;DOID:3904,4.42e-08,7;DOID:14566,8.73e-08,239;DOID:0050687,2.63e-07,143;DOID:305,2.65e-07,106;DOID:5409,3.12e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.17e-08;22!UBERON:0004802;1.77e-07;19!UBERON:0000115;1.77e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004807,1.17e-08,28;UBERON:0004802,5.20e-08,19;UBERON:0000115,5.20e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0,0.125542639594803,1.14620108621927,1.31360943119913,1.25937250101887,0.393364276848904,0.383829398097213,0.928896739896456,1.83884244895785,0.6024118375565,0,1.16200800870452,1.56386155736164,1.46800219667424,0.553995408531877,1.20326668482085,1.51907609501096,0.223915474239924,0.647787332037959,0.515151135268373,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.768482119587302,0.47296445977717,1.03423704220986,0.645484683583826,2.70852973188684,0.188242339542605,0.545812300115692,0.449446968890169,0,0.641858054152187,1.91801137739712,0,0.398927315243264,0.852449501065388,1.16083695451434,1.13477044938228,1.24564449799115,0.75374599577023,0,0,0.605399502633369,1.10483290796269,0.632924774881769,0.633765858935825,0.637812899895131,0,0.561643155732475,0.150176892841506,0.16072558669708,0.570025487482497,0,0.365328307529268,0,0.546138611262131,1.77901850772711,0.853460445133014,2.00197993518006,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,0,0.764546456250458,0,1.12101712596307,0.526768169550154,0.590129310341499,0,0.205601498999509,0.334372990781356,0.651844533267181,0,3.89653456815823,0.557052284425868,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0,0.276350017785848,0.579606171470105,0.444859689486181,1.07016331235885,2.09071047609954,0.226618685395132,0.766440987203842,0,0.506039384039006,0.95569624297229,0.651083453856419,0,0.451725357233318,0.895906278080929,1.24930726552346,1.18388626022008,0,0.201606743224732,0,0.579297615531196,0,0.670700859703636,0,0,0,0.289693037921647,0,0.973269740605272,0.945348171640679,1.10864698731282,0.614843499851882,0.72038491523742,0,1.11235332835329,0.649094787309367,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,1.67360306382335,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.366403487860815,5.27121669744253,0,0,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0.485618833104395,0.280901613404497,0.204154171254893,0.368502951935304,0.309977343527296,0,0,0,0,0.505008341862199,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.403008392910561,0.169560592310488,0.57978255948989,1.36373060295417,1.14721838155602,4.14710600840624,3.97589304964456,2.44007280025989,2.17688215532278,3.78481276313443,5.47466038613745,0,0.643240938192885,0,0,0,0.828147600278907,1.01150814046861,0.482022059766964,0.882351781859152,1.74303555273925,0.949082476444386,0.269662616320329,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.860919069801795,0.514703430895577,0.548751427043128,2.24803506515239,0.804231779293047,1.29623823221941,0,0,1.44331342025273,1.15930404975077,0.587043471179108,0,0,0,0.790204397959275,0.858486162094873,0.738651018262192,0,0.297262324577456,0,0.335964256397719,1.27597587518148,0.358234090811393,1.16253575405585,0.383382679165211,0.985326475791887,0.44024217006613,0.829312462163088,1.15295962733569,0.6312121671319,0.444485260045183,0,0,0,0.308482478109971,0,0.285826432630578,0.112131084345361,0,0.36669142910475,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,1.58390374586686,0.301439377059586,0.871533458600294,1.49959486773086,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0.358121926479791,0.224170287987055,0.394061520403854,1.07813787429759,1.15508732651774,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,1.00034104211935,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.737476674166813,0,0.195801157462741,0,0.620304078368662,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.802025881213139,0.828728900423067,0,0.182091168006717,0.131124414959424,0.451199612907412,1.15523005656622,1.56869953835371,0,1.58327443339314,0,0.170093705276516,1.0795795805107,0,0,0,0.764628819135115,0.831076008928724,0,0.219259876645935,0.261435451024901,1.28225062558195,1.64007322849853,2.27764876265012,0.824328093181778,0.366277859273374,0.247528499761764,0,0,0,0,0,0.15350367472613,0.275673144969061,0.751941714077915,0.145016693914229,0.767039646744908,0.534192213880424,0.330569830721956,0.576570202095319,0.255225424989168,0.50578890427775,0,0,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,1.00387946542836,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0.43050537267123,0,0.443430153536676,0.68917020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| ||
|short_description=p5@MST4 | |||
}} | }} |
Latest revision as of 11:00, 19 September 2015
Short description: | p5@MST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MST4_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_NM_001042453, NM_016542, uc004ewk.1, uc004ewl.1, uc010nrj.1, uc011mux.1_5end |
EntrezGene: | MST4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.25e-09 | 5 |
lymphocyte of B lineage | 1.14e-08 | 24 |
pro-B cell | 1.14e-08 | 24 |
epithelial cell of lung | 5.20e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory system epithelium | 1.17e-08 | 28 |
respiratory tract epithelium | 5.20e-08 | 19 |
lung epithelium | 5.20e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 3.64e-10 | 16 |
lung cancer | 7.15e-09 | 15 |
cancer | 2.92e-08 | 235 |
bronchus cancer | 4.42e-08 | 7 |
bronchogenic carcinoma | 4.42e-08 | 7 |
disease of cellular proliferation | 8.73e-08 | 239 |
cell type cancer | 2.63e-07 | 143 |
carcinoma | 2.65e-07 | 106 |
lung small cell carcinoma | 3.12e-07 | 4 |