FFCP PHASE1:Hg19::chrX:123095860..123095888,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:123095860..123095888,+
|short_description=p10@STAG2
|description=CAGE_peak_10_at_STAG2_5end
|association_with_transcript=0bp_to_ENST00000428941_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMT2 | |UniProt=B1AMT2 | ||
|association_with_transcript=0bp_to_ENST00000428941_5end | |||
|cluster_id=chrX:123095860..123095888,+ | |||
|description=CAGE_peak_10_at_STAG2_5end | |||
|id=chrX:123095860..123095888,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.24e-08!24;CL:0000826!3.24e-08!24;CL:0000542!5.97e-08!53;CL:0000051!5.97e-08!53;CL:0000838!1.19e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.13e-09;24!CL:0002322;6.53e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.83e-10,24;CL:0000826,1.83e-10,24;CL:0002322,7.43e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.26e-22!235;DOID:14566!2.95e-22!239;DOID:2531!1.35e-11!51;DOID:0060083!1.35e-11!51;DOID:0050687!3.75e-11!143;DOID:0050686!4.34e-11!137;DOID:305!2.47e-09!106;DOID:1240!6.65e-09!39;DOID:8692!6.99e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.42e-08;51!DOID:0060083;3.42e-08;51!DOID:1240;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.27e-14,235;DOID:14566,4.42e-13,239;DOID:2531,8.11e-12,51;DOID:0060083,8.11e-12,51;DOID:1240,5.94e-09,39;DOID:0050686,6.81e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.86e-13!94;UBERON:0001016!9.86e-13!94;UBERON:0001017!2.90e-11!82;UBERON:0005743!3.35e-11!86;UBERON:0001049!2.97e-09!57;UBERON:0005068!2.97e-09!57;UBERON:0006241!2.97e-09!57;UBERON:0007135!2.97e-09!57;UBERON:0000955!9.91e-09!69;UBERON:0006238!9.91e-09!69;UBERON:0002020!3.98e-08!34;UBERON:0003528!3.98e-08!34;UBERON:0002346!8.60e-08!90;UBERON:0002791!1.03e-07!33;UBERON:0001893!1.22e-07!34;UBERON:0002780!1.38e-07!41;UBERON:0001890!1.38e-07!41;UBERON:0006240!1.38e-07!41;UBERON:0003075!2.28e-07!86;UBERON:0007284!2.28e-07!86;UBERON:0002616!4.49e-07!59;UBERON:0003080!4.85e-07!42;UBERON:0001869!5.68e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.48e-08;34!UBERON:0002020;1.48e-08;34!UBERON:0002791;2.24e-08;32!UBERON:0001869;1.84e-07;32!UBERON:0001893;2.08e-07;34!UBERON:0000125;3.59e-07;9!UBERON:0002308;3.59e-07;9!UBERON:0002780;3.68e-07;41!UBERON:0001890;3.68e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-11,89;UBERON:0001017,7.46e-11,81;UBERON:0001049,9.57e-10,56;UBERON:0005068,9.57e-10,56;UBERON:0006241,9.57e-10,56;UBERON:0007135,9.57e-10,56;UBERON:0003528,1.57e-09,34;UBERON:0002020,1.57e-09,34;UBERON:0000073,8.52e-09,53;UBERON:0002616,8.52e-09,53;UBERON:0000955,9.56e-09,68;UBERON:0006238,9.56e-09,68;UBERON:0002780,1.33e-08,41;UBERON:0001890,1.33e-08,41;UBERON:0003080,1.33e-08,41;UBERON:0006240,1.33e-08,41;UBERON:0001893,1.82e-08,34;UBERON:0002791,2.31e-08,32;UBERON:0001869,1.77e-07,32;UBERON:0000125,4.23e-07,9;UBERON:0002308,4.23e-07,9 | |||
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| ||
|short_description=p10@STAG2 | |||
}} | }} |
Latest revision as of 07:52, 19 September 2015
Short description: | p10@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428941_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | B1AMT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.83e-10 | 24 |
pro-B cell | 1.83e-10 | 24 |
embryonic stem cell | 7.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.32e-11 | 89 |
central nervous system | 7.46e-11 | 81 |
neural tube | 9.57e-10 | 56 |
neural rod | 9.57e-10 | 56 |
future spinal cord | 9.57e-10 | 56 |
neural keel | 9.57e-10 | 56 |
brain grey matter | 1.57e-09 | 34 |
gray matter | 1.57e-09 | 34 |
regional part of nervous system | 8.52e-09 | 53 |
regional part of brain | 8.52e-09 | 53 |
brain | 9.56e-09 | 68 |
future brain | 9.56e-09 | 68 |
regional part of forebrain | 1.33e-08 | 41 |
forebrain | 1.33e-08 | 41 |
anterior neural tube | 1.33e-08 | 41 |
future forebrain | 1.33e-08 | 41 |
telencephalon | 1.82e-08 | 34 |
regional part of telencephalon | 2.31e-08 | 32 |
cerebral hemisphere | 1.77e-07 | 32 |
neural nucleus | 4.23e-07 | 9 |
nucleus of brain | 4.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.27e-14 | 235 |
disease of cellular proliferation | 4.42e-13 | 239 |
hematologic cancer | 8.11e-12 | 51 |
immune system cancer | 8.11e-12 | 51 |
leukemia | 5.94e-09 | 39 |
organ system cancer | 6.81e-08 | 137 |