FFCP PHASE1:Hg19::chrX:122318184..122318214,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:122318184..122318214,+
|short_description=p2@GRIA3
|description=CAGE_peak_2_at_GRIA3_5end
|association_with_transcript=-9bp_to_ENST00000335161,ENST00000542...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2892 | |EntrezGene=2892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4573 | |HGNC=4573 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESZ0,F5H470 | |UniProt=E7ESZ0,F5H470 | ||
|association_with_transcript=-9bp_to_ENST00000335161,ENST00000542149_5end | |||
|cluster_id=chrX:122318184..122318214,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIA3_5end | |||
|id=chrX:122318184..122318214,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.84e-12!180;CL:0000057!2.93e-08!75;CL:0002620!4.49e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.37e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.30e-10,23;CL:0000057,1.71e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.28e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.29e-07;5!DOID:450;6.29e-07;5!DOID:66;6.29e-07;5!DOID:423;6.29e-07;5!DOID:0080000;6.29e-07;5!DOID:11722;6.29e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.14e-07,5;DOID:450,6.14e-07,5;DOID:66,6.14e-07,5;DOID:423,6.14e-07,5;DOID:0080000,6.14e-07,5;DOID:11722,6.14e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.08e-33!82;UBERON:0001049!1.07e-32!57;UBERON:0005068!1.07e-32!57;UBERON:0006241!1.07e-32!57;UBERON:0007135!1.07e-32!57;UBERON:0005743!2.49e-31!86;UBERON:0000073!2.20e-30!94;UBERON:0001016!2.20e-30!94;UBERON:0002616!4.06e-28!59;UBERON:0002780!7.04e-28!41;UBERON:0001890!7.04e-28!41;UBERON:0006240!7.04e-28!41;UBERON:0003080!9.30e-27!42;UBERON:0000955!2.75e-26!69;UBERON:0006238!2.75e-26!69;UBERON:0002020!1.06e-25!34;UBERON:0003528!1.06e-25!34;UBERON:0001893!1.11e-25!34;UBERON:0002791!7.95e-25!33;UBERON:0001869!2.86e-24!32;UBERON:0004121!1.48e-23!169;UBERON:0000924!1.11e-22!173;UBERON:0006601!1.11e-22!173;UBERON:0003075!4.08e-22!86;UBERON:0007284!4.08e-22!86;UBERON:0000033!2.23e-21!123;UBERON:0002346!1.08e-20!90;UBERON:0007023!1.35e-20!115;UBERON:0000153!5.09e-20!129;UBERON:0007811!5.09e-20!129;UBERON:0000956!3.19e-19!25;UBERON:0000203!3.19e-19!25;UBERON:0000475!9.73e-19!365;UBERON:0002619!2.43e-18!22;UBERON:0001950!1.29e-16!20;UBERON:0003056!1.37e-16!61;UBERON:0000468!2.25e-09!659;UBERON:0002199!5.53e-09!45;UBERON:0002416!5.53e-09!45;UBERON:0000467!8.19e-09!625;UBERON:0000480!1.09e-08!626;UBERON:0003102!2.78e-08!95;UBERON:0002420!5.42e-08!9;UBERON:0007245!5.42e-08!9;UBERON:0010009!5.42e-08!9;UBERON:0010011!5.42e-08!9;UBERON:0000454!5.42e-08!9;UBERON:0002308!6.60e-08!9;UBERON:0000125!6.60e-08!9;UBERON:0003076!3.01e-07!15;UBERON:0003057!3.01e-07!15;UBERON:0002097!3.31e-07!40;UBERON:0000025!5.93e-07!194;UBERON:0004111!6.84e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.09e-31;34!UBERON:0003528;5.98e-31;34!UBERON:0002020;5.98e-31;34!UBERON:0001869;1.23e-30;32!UBERON:0002791;1.66e-30;32!UBERON:0002619;3.77e-27;22!UBERON:0002780;5.49e-27;41!UBERON:0001890;5.49e-27;41!UBERON:0000956;8.35e-27;25!UBERON:0000203;8.35e-27;25!UBERON:0000073;1.41e-24;53!UBERON:0002616;1.41e-24;53!UBERON:0001950;1.45e-24;20!UBERON:0001017;5.08e-17;75!UBERON:0000955;1.99e-16;68!UBERON:0001016;8.92e-15;83!UBERON:0002420;4.93e-11;9!UBERON:0007245;4.93e-11;9!UBERON:0010009;4.93e-11;9!UBERON:0010011;4.93e-11;9!UBERON:0000454;4.93e-11;9!UBERON:0000125;5.84e-11;9!UBERON:0002308;5.84e-11;9!UBERON:0000200;2.61e-09;6!UBERON:0009663;1.05e-08;7!UBERON:0004732;4.03e-08;13!UBERON:0000349;9.17e-08;5!UBERON:0002021;1.03e-07;5!UBERON:0001872;1.16e-07;5!UBERON:0002298;1.67e-07;6!UBERON:0001871;2.12e-07;6!UBERON:0002199;2.66e-07;46!UBERON:0002416;2.66e-07;46!UBERON:0004733;3.90e-07;12!UBERON:0002028;3.90e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.82e-45,56;UBERON:0005068,1.82e-45,56;UBERON:0006241,1.82e-45,56;UBERON:0007135,1.82e-45,56;UBERON:0000073,1.98e-42,53;UBERON:0002616,1.98e-42,53;UBERON:0001017,2.65e-42,81;UBERON:0001016,6.75e-39,89;UBERON:0002780,5.62e-37,41;UBERON:0001890,5.62e-37,41;UBERON:0003080,5.62e-37,41;UBERON:0006240,5.62e-37,41;UBERON:0003528,1.94e-36,34;UBERON:0002020,1.94e-36,34;UBERON:0001893,2.06e-36,34;UBERON:0000955,1.83e-35,68;UBERON:0006238,1.83e-35,68;UBERON:0003075,1.19e-34,82;UBERON:0007284,1.19e-34,82;UBERON:0001869,2.73e-34,32;UBERON:0002791,3.99e-34,32;UBERON:0002346,4.03e-32,86;UBERON:0010371,9.32e-29,104;UBERON:0002619,3.97e-27,22;UBERON:0000956,1.02e-26,25;UBERON:0000203,1.02e-26,25;UBERON:0004121,2.61e-26,171;UBERON:0000924,2.61e-26,171;UBERON:0006601,2.61e-26,171;UBERON:0010314,1.68e-25,132;UBERON:0001950,1.56e-24,20;UBERON:0003056,1.98e-24,61;UBERON:0007023,3.10e-18,114;UBERON:0002420,3.37e-11,9;UBERON:0007245,3.37e-11,9;UBERON:0010009,3.37e-11,9;UBERON:0010011,3.37e-11,9;UBERON:0000454,3.37e-11,9;UBERON:0000125,4.52e-11,9;UBERON:0002308,4.52e-11,9;UBERON:0000025,8.73e-11,192;UBERON:0002199,1.60e-10,46;UBERON:0002416,1.60e-10,46;UBERON:0011216,2.89e-10,223;UBERON:0003076,1.08e-09,15;UBERON:0003057,1.08e-09,15;UBERON:0000200,2.66e-09,6;UBERON:0009663,7.77e-09,7;UBERON:0002097,1.11e-08,41;UBERON:0004732,4.98e-08,13;UBERON:0000349,8.66e-08,5;UBERON:0004111,9.62e-08,240;UBERON:0002021,1.07e-07,5;UBERON:0001872,1.27e-07,5;UBERON:0002298,1.80e-07,6;UBERON:0001871,2.02e-07,6;UBERON:0004733,4.93e-07,12;UBERON:0002028,4.93e-07,12;UBERON:0007277,4.93e-07,12 | |||
|phase1_expression=0.54503513781167,1.71280419112787,2.39622486963151,3.00219895059391,1.78784437770915,1.74467704820074,7.59899634504932,1.26343974685366,1.04474251279935,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,1.71741592278634,0.821246550437305,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.722878304769133,0.50133791063589,2.17269778441236,3.9764297352555,3.40644409211845,0,0,0.087834785693126,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,8.20936921041957,2.58152958673932,0.709336764396714,0,0,0,0,0,0,0.605429710579726,0,0.468642863667593,1.24864030732128,0,0.448346041655403,0,0,0,0.816616685019573,0.122834317311768,0.516628905878827,3.56400857184616,5.68713937340681,0,0,0.168336113954066,0,2.49357703935765,2.19488810440419,1.5324389789951,2.25357088359895,0,3.40840307808838,4.69826255400848,4.4505699243508,6.30191301777245,6.80146692973697,8.24449728146013,3.53622027030021,12.4894485858537,2.92311015483596,7.57301322732343,6.99579229681475,2.90962902273861,4.26011511019937,4.23158812556089,1.3564847384839,0,0,0,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0.36497735907583,1.56449532329816,1.92972281457866,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,1.04337364477569,0.234817388471643,0,0,0,0,0,0,0,0,0,1.34385702559088,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0.87192013766656,0.07333828582095,1.03417372606222,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,3.31583314765545,0.871533458600294,0.799783929456456,0,0,0,0.239624855491583,0,0,1.73737568001095,0.821905290201534,2.68591444859843,0,0,0,0,3.30323011489202,1.30139853857622,4.63973287666617,3.18280904135263,2.55175500661265,0,0,0,0,0,0,0.623912584592421,2.3195768543631,1.10391690523754,0.35142424497814,0.902838299183157,0,0,1.32845119707087,0.368738337083406,3.64911180765948,0,0,0,0,0,0,0,0,0.248107807818777,7.21271274453894,2.52594084989766,1.79394808957981,4.60536524160033,2.73451665944133,1.48418066444991,0.462629081407967,1.59805552781814,0.657017248110473,0,0.464841513839837,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,2.87132768998086,3.25030123018261,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.534192213880424,2.80984356113663,2.49847087574638,13.6545602369205,1.51736671283325,0,4.7221852024596,1.3940745403212,0.308033580176089,0.532306030317022,1.73986598415015,2.59453906745488,1.43124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,1.01091240786658,1.58510321173008,0,0,0.974853958525138,0,0.272999822815972,0.282810863907425,1.13008116620243,1.10273068709225,0.66343897524122,0,0,0.655894752046633,1.21746226177622,0.30982349809975,1.12678241012897,0,0.196498082026242,1.07001315444375,1.06428319221179,1.05553817648832,0.658589785919804,0,0,0.0962221127255121,0,0,0.188287601553558,3.44404298136984,1.68471475667626,1.33029046061003,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,13.2229251425882,0,0,0,0.996239941255349,0,0,13.6017347727866,0,4.0435146396035,0,0,0,0.197286811273867,0,0,2.90799823828566,11.4104760739077,1.99613798001194,0,0,0,0,0,0,0,0.583209226766509,0,2.65722415744152,7.83876851065152,4.5774520895125,3.20679853800551,2.06883333267483,5.92340572315726,0,0,1.53900517007594,1.82307289355202,0,0,0,0.638002319463839,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,3.63966118095656,0,4.91955336023212,0,0,0,0,0,6.1214552326098,2.78020950365347,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.193978032976839,0,2.48578814858586,0,0,12.9787131709551,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,1.80126086612937,5.20240439789574,0,0.859530882839914,0.262887354279314,1.95497680890578,1.3749625440701,0,0.399358000997982,0,0.446342914883745,0.134366944973453,1.44119953416961,0,0,0,0,0.295282444544246,0,8.74752658790234,15.390984890608,0.643012593860077,0.137539436597234,0.415440338029185,0.2249738915515,0,10.4489237451802,0,0.86686278029118,0.104909176269996,0,0,0,0,0,0,1.62899880526114,1.72844298240254,5.55198512185996,0,0,4.43008856642096,0,0.146552233678082,0,6.20558190535443,5.2893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,9.74674997963685,8.78589107294135,17.4015393682035,1.14681839138014,3.77158775225298,4.71932662354514,0,0,0,0.28546533354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| ||
|short_description=p2@GRIA3 | |||
}} | }} |
Latest revision as of 07:15, 19 September 2015
Short description: | p2@GRIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_ENST00000335161, ENST00000542149_5end |
EntrezGene: | GRIA3 |
HGNC: | 4573 |
UniProt: | E7ESZ0F5H470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.30e-10 | 23 |
fibroblast | 1.71e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.14e-07 | 5 |
myotonic disease | 6.14e-07 | 5 |
muscle tissue disease | 6.14e-07 | 5 |
myopathy | 6.14e-07 | 5 |
muscular disease | 6.14e-07 | 5 |
myotonic dystrophy | 6.14e-07 | 5 |