FFCP PHASE1:Hg19::chrX:120331616..120331638,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:120331616..120331638,+
|short_description=p@chrX:120331616..120331638,+
|description=CAGE_peak_at_chrX:120331616..120331638,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:120331616..120331638,+ | |||
|description=CAGE_peak_at_chrX:120331616..120331638,+ | |||
|id=chrX:120331616..120331638,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.20e-10;2!CL:1000415;1.20e-10;2!CL:0000082;1.20e-08;19!CL:0000322;2.04e-07;3!CL:0000174;2.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,9.21e-11,2;CL:1000415,1.72e-10,2;CL:0000082,1.23e-08,19;CL:0000174,1.92e-07,3;CL:0000322,2.55e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.68e-14;30 | |||
|ontology_enrichment_disease=DOID:162!9.71e-19!235;DOID:14566!6.57e-18!239;DOID:305!4.77e-17!106;DOID:0050687!7.26e-17!143;DOID:299!9.31e-09!25;DOID:0050686!1.69e-08!137;DOID:0050615!4.07e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1324;4.02e-11;15!DOID:4468;4.41e-11;2!DOID:3910;1.01e-10;2!DOID:0050615;2.18e-10;16!DOID:3908;2.36e-09;5!DOID:1036;2.39e-09;8!DOID:3905;6.29e-09;9!DOID:299;1.27e-08;25!DOID:1325;7.38e-07;7!DOID:3904;7.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.79e-24,235;DOID:14566,8.38e-24,239;DOID:0050687,9.18e-22,143;DOID:305,1.23e-20,106;DOID:0050686,1.73e-11,137;DOID:1324,4.14e-11,15;DOID:4468,5.39e-11,2;DOID:3910,1.42e-10,2;DOID:0050615,2.25e-10,16;DOID:3908,2.65e-09,5;DOID:1036,3.13e-09,8;DOID:3905,7.07e-09,9;DOID:299,1.23e-08,25;DOID:1325,8.76e-07,7;DOID:3904,8.76e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.31e-09!7;UBERON:0001173!3.31e-09!7;UBERON:0004912!3.31e-09!7;UBERON:0002394!7.95e-08!4;UBERON:0003928!7.95e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.59e-24;7!UBERON:0001173;3.59e-24;7!UBERON:0002394;2.12e-19;4!UBERON:0003928;2.12e-19;4!UBERON:0000058;8.63e-17;10!UBERON:0004903;1.01e-10;2!UBERON:0002173;1.01e-10;2!UBERON:0002186;1.01e-10;2!UBERON:0004802;1.20e-08;19!UBERON:0000115;1.20e-08;19!UBERON:0002423;1.54e-08;25!UBERON:0004821;2.04e-07;3!UBERON:0007499;2.04e-07;3!UBERON:0003215;2.04e-07;3!UBERON:0010368;2.04e-07;3!UBERON:0009911;2.04e-07;3!UBERON:0002299;2.04e-07;3!UBERON:0006524;2.04e-07;3!UBERON:0008874;2.04e-07;3!UBERON:0002169;2.04e-07;3!UBERON:0004894;2.04e-07;3!UBERON:0002048;2.23e-07;22!UBERON:0004807;2.23e-07;22!UBERON:0000117;2.23e-07;22!UBERON:0000171;2.23e-07;22!UBERON:0000170;2.23e-07;22!UBERON:0002369;2.28e-07;3!UBERON:0002110;2.28e-07;3!UBERON:0001235;2.28e-07;3!UBERON:0006858;2.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,2.18e-18,9;UBERON:0001173,2.18e-18,9;UBERON:0004912,2.18e-18,9;UBERON:0002394,8.51e-13,6;UBERON:0003928,8.51e-13,6;UBERON:0004903,1.42e-10,2;UBERON:0002173,1.42e-10,2;UBERON:0002186,1.42e-10,2;UBERON:0004802,1.23e-08,19;UBERON:0000115,1.23e-08,19;UBERON:0007499,1.91e-08,25;UBERON:0009497,2.00e-08,25;UBERON:0000015,2.00e-08,25;UBERON:0002423,2.00e-08,25;UBERON:0006235,2.00e-08,25;UBERON:0004161,2.00e-08,25;UBERON:0000058,2.03e-08,19;UBERON:0005911,2.11e-08,82;UBERON:0009856,4.38e-08,26;UBERON:0004807,1.39e-07,28;UBERON:0002369,1.92e-07,3;UBERON:0001235,1.92e-07,3;UBERON:0006858,1.92e-07,3;UBERON:0002048,2.27e-07,22;UBERON:0000117,2.27e-07,22;UBERON:0000171,2.27e-07,22;UBERON:0000170,2.27e-07,22;UBERON:0005597,2.27e-07,22;UBERON:0000118,2.27e-07,22;UBERON:0005177,2.50e-07,101;UBERON:0004821,2.55e-07,3;UBERON:0003215,2.55e-07,3;UBERON:0010368,2.55e-07,3;UBERON:0009911,2.55e-07,3;UBERON:0002299,2.55e-07,3;UBERON:0006524,2.55e-07,3;UBERON:0008874,2.55e-07,3;UBERON:0002169,2.55e-07,3;UBERON:0004894,2.55e-07,3;UBERON:0002110,2.89e-07,3;UBERON:0006242,2.89e-07,3 | |||
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| ||
|short_description=p@chrX:120331616..120331638,+ | |||
}} | }} |
Latest revision as of 05:26, 1 August 2015
Short description: | p@chrX:120331616..120331638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:120331616..120331638, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 9.21e-11 | 2 |
epithelial cell of gall bladder | 1.72e-10 | 2 |
epithelial cell of lung | 1.23e-08 | 19 |
steroid hormone secreting cell | 1.92e-07 | 3 |
pneumocyte | 2.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.79e-24 | 235 |
disease of cellular proliferation | 8.38e-24 | 239 |
cell type cancer | 9.18e-22 | 143 |
carcinoma | 1.23e-20 | 106 |
organ system cancer | 1.73e-11 | 137 |
lung cancer | 4.14e-11 | 15 |
clear cell adenocarcinoma | 5.39e-11 | 2 |
lung adenocarcinoma | 1.42e-10 | 2 |
respiratory system cancer | 2.25e-10 | 16 |
non-small cell lung carcinoma | 2.65e-09 | 5 |
chronic leukemia | 3.13e-09 | 8 |
lung carcinoma | 7.07e-09 | 9 |
adenocarcinoma | 1.23e-08 | 25 |
bronchus cancer | 8.76e-07 | 7 |
bronchogenic carcinoma | 8.76e-07 | 7 |