FFCP PHASE1:Hg19::chr4:16228290..16228300,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202018 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26887 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NXT6 | |||
|association_with_transcript=-126bp_to_ENST00000405303_5end | |||
|cluster_id=chr4:16228290..16228300,- | |||
|description=CAGE_peak_4_at_TAPT1_5end | |||
|id=chr4:16228290..16228300,- | |||
|ontology_enrichment_celltype=CL:0000037!4.71e-11!172;CL:0000566!4.71e-11!172;CL:0000988!5.38e-10!182;CL:0002032!1.43e-09!165;CL:0000837!1.43e-09!165;CL:0002031!2.43e-09!124;CL:0000838!3.22e-09!52;CL:0000738!6.61e-09!140;CL:0000542!8.54e-09!53;CL:0000051!8.54e-09!53;CL:0002087!4.68e-08!119;CL:0000791!4.90e-08!18;CL:0000789!4.90e-08!18;CL:0002420!4.90e-08!18;CL:0002419!4.90e-08!18;CL:0000790!4.90e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.35e-23;6!CL:0000791;1.29e-18;18!CL:0000789;1.29e-18;18!CL:0002419;1.29e-18;18!CL:0000226;1.03e-16;3!CL:0000842;1.03e-16;3!CL:0000084;4.64e-13;25!CL:0000898;2.07e-08;3!CL:0000767;2.40e-08;3!CL:0000081;3.10e-08;11!CL:0000542;3.41e-07;53!CL:0000094;7.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.43e-23,6;CL:0000791,1.05e-18,18;CL:0000789,1.05e-18,18;CL:0002420,1.05e-18,18;CL:0002419,1.05e-18,18;CL:0000790,1.05e-18,18;CL:0000226,4.58e-17,3;CL:0000842,4.58e-17,3;CL:0000084,4.02e-13,25;CL:0000827,4.02e-13,25;CL:0000988,1.96e-12,177;CL:0000037,4.46e-12,168;CL:0000838,9.47e-11,52;CL:0000542,1.65e-10,53;CL:0000051,1.65e-10,53;CL:0002032,4.26e-09,161;CL:0000837,4.26e-09,161;CL:0000738,4.71e-09,136;CL:0000898,2.64e-08,3;CL:0000767,2.84e-08,3;CL:0000081,4.06e-08,11;CL:0002087,1.86e-07,115;CL:0000094,8.91e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.29e-18;18!CL:0000051;3.41e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.10e-13;2!UBERON:0005058;8.10e-13;2!UBERON:0009113;8.10e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.31e-13,4;UBERON:0005058,2.31e-13,4;UBERON:0009113,2.31e-13,4;UBERON:0003295,2.31e-13,4;UBERON:0005562,2.31e-13,4;UBERON:0003351,4.61e-09,6;UBERON:0004177,7.93e-08,7;UBERON:0005057,7.93e-08,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.164201178899891,0,2.36018566109342,1.15148819429164,0,0,0,0,0.232401601740905,0,0.880801318004542,0.553995408531877,0.802177789880567,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,1.00499466102697,0,0.217188844705117,0,0.368277635987565,0,0,0.425208599930087,0,0.22465726229299,0,0.16072558669708,0.570025487482497,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,0,0.587237189370939,1.52909291250092,0,0.560508562981536,0,3.34406609193516,3.14408610199332,1.43921049299656,0.501559486172034,3.2592226663359,3.31413464014313,0,0.334231370655521,0,0.443067789167242,0.541607727530031,0.640456598628376,0.650296737799391,0,0,0,2.96573126324121,1.33770414044857,0,0.113309342697566,1.14966148080576,0.68725489096526,1.77113784413652,0.637130828648193,0.651083453856419,0,0.903450714466637,0.895906278080929,1.24930726552346,0.473554504088034,0,1.81446068902259,0.267440195783507,2.31719046212478,0,0,0,0.722878304769133,0.50133791063589,0,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0.207328115540772,0.288239906833923,0.12624243342638,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0.336393253036082,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0.112085143993527,1.37921532141349,0.215627574859517,0.385029108839245,0.508189248444927,0,0,0.335032530668698,0,2.24702107184155,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.44737618286021,1.2942852049117,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0,0.131124414959424,0.451199612907412,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.660075999364704,0,0,0,0,0.154048617114644,0,0.275673144969061,0.429680979473094,0.435050081742686,0,0,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,1.08006287447623,0,0,0,0,0,0.577076851905779,0.640276590135727,0.478278818186467,0.399158742865633,0.5745161103971,0,0,0,0,0,0,0.169291777801603,0.321176150207399,0.403599414382095,0.425846237690326,0,0.307240764308458,0.447352215784832,0.500547425135725,0,0.278406173895242,1.23087398947712,0,0.33307196799782,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0.755798243562828,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,1.02314474045374,0.197286811273867,0,0,0,0.463840490809256,0,0,0.349839999984783,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0.438770794307945,0.10893846351899,0.139423744278603,0.0769502585037971,0.341826167541004,0.23056390438806,0.0897576444097721,0.325942115766024,0,0,0.533034776018635,0,0.31396051279005,1.32969345520125,0,0,0,0,1.43042921082341,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.606610196826093,0,0.468528891450678,0.364909578431332,0,0,0.394584402849391,0,0.61214552326098,0.31593289814244,0,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0.171986032471617,0.0967563312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| |||
|short_description=p4@TAPT1 | |||
}} |
Latest revision as of 12:57, 16 September 2015
Short description: | p4@TAPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TAPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_ENST00000405303_5end |
EntrezGene: | TAPT1 |
HGNC: | 26887 |
UniProt: | Q6NXT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.43e-23 | 6 |
mature alpha-beta T cell | 1.05e-18 | 18 |
alpha-beta T cell | 1.05e-18 | 18 |
immature T cell | 1.05e-18 | 18 |
mature T cell | 1.05e-18 | 18 |
immature alpha-beta T cell | 1.05e-18 | 18 |
single nucleate cell | 4.58e-17 | 3 |
mononuclear cell | 4.58e-17 | 3 |
T cell | 4.02e-13 | 25 |
pro-T cell | 4.02e-13 | 25 |
hematopoietic cell | 1.96e-12 | 177 |
hematopoietic stem cell | 4.46e-12 | 168 |
lymphoid lineage restricted progenitor cell | 9.47e-11 | 52 |
lymphocyte | 1.65e-10 | 53 |
common lymphoid progenitor | 1.65e-10 | 53 |
hematopoietic oligopotent progenitor cell | 4.26e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.26e-09 | 161 |
leukocyte | 4.71e-09 | 136 |
naive T cell | 2.64e-08 | 3 |
basophil | 2.84e-08 | 3 |
blood cell | 4.06e-08 | 11 |
nongranular leukocyte | 1.86e-07 | 115 |
granulocyte | 8.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.31e-13 | 4 |
hemolymphoid system gland | 2.31e-13 | 4 |
thymic region | 2.31e-13 | 4 |
pharyngeal gland | 2.31e-13 | 4 |
thymus primordium | 2.31e-13 | 4 |
pharyngeal epithelium | 4.61e-09 | 6 |
hemopoietic organ | 7.93e-08 | 7 |
immune organ | 7.93e-08 | 7 |