FFCP PHASE1:Hg19::chr4:152638396..152638419,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8849 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=63bp_to_ENST00000515490_5end | |||
|cluster_id=chr4:152638396..152638419,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_PET112_5end | |||
|id=chr4:152638396..152638419,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.47e-15;3!UBERON:0003057;8.47e-15;3!UBERON:0006601;3.73e-12;82!UBERON:0005425;9.08e-12;1!UBERON:0006222;3.12e-11;1!UBERON:0002532;2.10e-07;206!UBERON:0010316;2.10e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.60e-60!57;UBERON:0005068!2.60e-60!57;UBERON:0006241!2.60e-60!57;UBERON:0007135!2.60e-60!57;UBERON:0005743!8.43e-50!86;UBERON:0001017!1.17e-49!82;UBERON:0000955!3.18e-47!69;UBERON:0006238!3.18e-47!69;UBERON:0002616!4.03e-47!59;UBERON:0000073!5.07e-47!94;UBERON:0001016!5.07e-47!94;UBERON:0003075!1.00e-44!86;UBERON:0007284!1.00e-44!86;UBERON:0002346!2.48e-42!90;UBERON:0002780!1.90e-40!41;UBERON:0001890!1.90e-40!41;UBERON:0006240!1.90e-40!41;UBERON:0003080!2.36e-39!42;UBERON:0002020!2.21e-37!34;UBERON:0003528!2.21e-37!34;UBERON:0001893!3.45e-37!34;UBERON:0007023!5.43e-36!115;UBERON:0002791!1.25e-34!33;UBERON:0001869!7.15e-32!32;UBERON:0003056!4.16e-30!61;UBERON:0000033!8.41e-30!123;UBERON:0000153!5.44e-28!129;UBERON:0007811!5.44e-28!129;UBERON:0001950!3.71e-24!20;UBERON:0004121!2.05e-23!169;UBERON:0000924!1.20e-22!173;UBERON:0006601!1.20e-22!173;UBERON:0003076!6.43e-22!15;UBERON:0003057!6.43e-22!15;UBERON:0000956!6.86e-22!25;UBERON:0000203!6.86e-22!25;UBERON:0002619!8.76e-22!22;UBERON:0002298!1.06e-21!8;UBERON:0002308!2.56e-18!9;UBERON:0000125!2.56e-18!9;UBERON:0004732!1.97e-16!13;UBERON:0000200!5.90e-14!6;UBERON:0004733!1.15e-13!12;UBERON:0002028!1.15e-13!12;UBERON:0007277!1.15e-13!12;UBERON:0000025!1.23e-13!194;UBERON:0009663!3.38e-12!7;UBERON:0001896!9.07e-12!3;UBERON:0005290!9.07e-12!3;UBERON:0010096!9.07e-12!3;UBERON:0006331!1.08e-11!3;UBERON:0000988!1.20e-11!3;UBERON:0002240!1.76e-11!3;UBERON:0001872!3.15e-11!5;UBERON:0002771!1.25e-10!3;UBERON:0002420!2.10e-09!9;UBERON:0007245!2.10e-09!9;UBERON:0010009!2.10e-09!9;UBERON:0010011!2.10e-09!9;UBERON:0000454!2.10e-09!9;UBERON:0004111!2.64e-09!241;UBERON:0005162!2.14e-08!2;UBERON:0000122!2.14e-08!2;UBERON:0002148!2.22e-08!2;UBERON:0009662!2.22e-08!2;UBERON:0001897!3.50e-08!2;UBERON:0001875!4.30e-08!2;UBERON:0006514!4.30e-08!2;UBERON:0000477!3.58e-07!286;UBERON:0000483!3.65e-07!309;UBERON:0005174!5.02e-07!5;UBERON:0001137!5.02e-07!5;UBERON:0000119!5.19e-07!312;UBERON:0001871!9.25e-07!7;UBERON:0002021!9.47e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.88e-60;6!UBERON:0004732;1.51e-37;13!UBERON:0001896;3.62e-31;3!UBERON:0005290;3.62e-31;3!UBERON:0000988;8.58e-31;3!UBERON:0004733;5.77e-30;12!UBERON:0002028;5.77e-30;12!UBERON:0000125;1.70e-27;9!UBERON:0002308;1.70e-27;9!UBERON:0000073;2.72e-25;53!UBERON:0002616;2.72e-25;53!UBERON:0005162;2.55e-21;2!UBERON:0000122;2.55e-21;2!UBERON:0002148;2.83e-21;2!UBERON:0006331;2.83e-21;2!UBERON:0009662;2.83e-21;2!UBERON:0001897;1.00e-20;2!UBERON:0010225;1.00e-20;2!UBERON:0001875;2.35e-20;2!UBERON:0006514;2.35e-20;2!UBERON:0001017;1.83e-16;75!UBERON:0001016;2.96e-15;83!UBERON:0002240;8.47e-15;3!UBERON:0005174;8.47e-15;3!UBERON:0001137;8.47e-15;3!UBERON:0000955;1.73e-13;68!UBERON:0001894;2.66e-13;7!UBERON:0009663;3.14e-13;7!UBERON:0002780;3.97e-13;41!UBERON:0001890;3.97e-13;41!UBERON:0007023;1.06e-12;114!UBERON:0000941;9.08e-12;1!UBERON:0001785;9.08e-12;1!UBERON:0002464;9.08e-12;1!UBERON:0004904;9.08e-12;1!UBERON:0001021;9.08e-12;1!UBERON:0002038;1.97e-11;1!UBERON:0009661;1.97e-11;1!UBERON:0002950;1.97e-11;1!UBERON:0001891;1.97e-11;1!UBERON:0002336;2.54e-11;1!UBERON:0011215;2.54e-11;1!UBERON:0001018;2.54e-11;1!UBERON:0002473;2.54e-11;1!UBERON:0005340;2.54e-11;1!UBERON:0003544;2.54e-11;1!UBERON:0005970;2.54e-11;1!UBERON:0002316;2.54e-11;1!UBERON:0001020;2.54e-11;1!UBERON:0002437;2.54e-11;1!UBERON:0002784;7.53e-11;4!UBERON:0002680;1.12e-10;9!UBERON:0001895;1.12e-10;9!UBERON:0002420;2.05e-10;9!UBERON:0007245;2.05e-10;9!UBERON:0010009;2.05e-10;9!UBERON:0010011;2.05e-10;9!UBERON:0000454;2.05e-10;9!UBERON:0003528;1.87e-09;34!UBERON:0002020;1.87e-09;34!UBERON:0001893;7.32e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.69e-60,6;UBERON:0001049,5.86e-48,56;UBERON:0005068,5.86e-48,56;UBERON:0006241,5.86e-48,56;UBERON:0007135,5.86e-48,56;UBERON:0003076,2.27e-42,15;UBERON:0003057,2.27e-42,15;UBERON:0001016,1.10e-40,89;UBERON:0001017,1.29e-40,81;UBERON:0000073,5.36e-39,53;UBERON:0002616,5.36e-39,53;UBERON:0000955,2.39e-38,68;UBERON:0006238,2.39e-38,68;UBERON:0004732,1.43e-37,13;UBERON:0003075,2.00e-36,82;UBERON:0007284,2.00e-36,82;UBERON:0002346,1.22e-34,86;UBERON:0007023,2.32e-32,114;UBERON:0001896,3.62e-31,3;UBERON:0005290,3.62e-31,3;UBERON:0010096,3.62e-31,3;UBERON:0000988,8.16e-31,3;UBERON:0004733,5.63e-30,12;UBERON:0002028,5.63e-30,12;UBERON:0007277,5.63e-30,12;UBERON:0010371,2.77e-28,104;UBERON:0000125,1.36e-27,9;UBERON:0002308,1.36e-27,9;UBERON:0010314,8.37e-22,132;UBERON:0005162,2.31e-21,2;UBERON:0000122,2.31e-21,2;UBERON:0002148,2.55e-21,2;UBERON:0006331,2.55e-21,2;UBERON:0009662,2.55e-21,2;UBERON:0001897,9.53e-21,2;UBERON:0010225,9.53e-21,2;UBERON:0001875,1.74e-20,2;UBERON:0006514,1.74e-20,2;UBERON:0004121,2.53e-20,171;UBERON:0000924,2.53e-20,171;UBERON:0006601,2.53e-20,171;UBERON:0002780,1.01e-17,41;UBERON:0001890,1.01e-17,41;UBERON:0003080,1.01e-17,41;UBERON:0006240,1.01e-17,41;UBERON:0011216,5.87e-15,223;UBERON:0002240,8.77e-15,3;UBERON:0005174,8.77e-15,3;UBERON:0001137,8.77e-15,3;UBERON:0003056,1.72e-14,61;UBERON:0001894,2.66e-13,7;UBERON:0006222,2.66e-13,7;UBERON:0009663,2.77e-13,7;UBERON:0003528,3.80e-13,34;UBERON:0002020,3.80e-13,34;UBERON:0000025,1.97e-12,192;UBERON:0000941,8.62e-12,1;UBERON:0001785,8.62e-12,1;UBERON:0002464,8.62e-12,1;UBERON:0004904,8.62e-12,1;UBERON:0001021,8.62e-12,1;UBERON:0003902,8.62e-12,1;UBERON:0005425,8.62e-12,1;UBERON:0002038,1.97e-11,1;UBERON:0009661,1.97e-11,1;UBERON:0002950,1.97e-11,1;UBERON:0001891,1.97e-11,1;UBERON:0009616,1.97e-11,1;UBERON:0010286,1.97e-11,1;UBERON:0002336,2.42e-11,1;UBERON:0011215,2.42e-11,1;UBERON:0001018,2.42e-11,1;UBERON:0002473,2.42e-11,1;UBERON:0005340,2.42e-11,1;UBERON:0003544,2.42e-11,1;UBERON:0005970,2.42e-11,1;UBERON:0002316,2.42e-11,1;UBERON:0001020,2.42e-11,1;UBERON:0002437,2.42e-11,1;UBERON:0002784,7.35e-11,4;UBERON:0002680,1.10e-10,9;UBERON:0001895,1.10e-10,9;UBERON:0010092,1.10e-10,9;UBERON:0002420,1.86e-10,9;UBERON:0007245,1.86e-10,9;UBERON:0010009,1.86e-10,9;UBERON:0010011,1.86e-10,9;UBERON:0000454,1.86e-10,9;UBERON:0001893,1.09e-09,34;UBERON:0004111,1.97e-09,240;UBERON:0000483,6.34e-08,306;UBERON:0000119,8.06e-08,309;UBERON:0002791,2.66e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,2.90799823828566,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84186457989859,0,2.81117334870407,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.80126086612937,1.50595916781192,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,4.39562051629272,7.40502569759064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,7.45431954397093,6.43388498913743,7.20318274120048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.11743701340006,0.615349092722265,0,0.96820153449905,0.484426936895553,11.4215536207324,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.675375846183947,0.781078098613847,0.413373593002368,1.33173201407204,0,0,0,0,0,0,0,0,0,0,0,0,3.05863798395743,0.986591603442736,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63757255305759,11.2877632124293,0.4226557275834,0,0,0,0,0,0,0,0,0,4.15684791139209,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,4.03388683861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@PET112 | |||
}} |
Latest revision as of 02:55, 16 September 2015
Short description: | p6@PET112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PET112_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 63bp_to_ENST00000515490_5end |
EntrezGene: | PET112 |
HGNC: | 8849 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data