FFCP PHASE1:Hg19::chr4:151468721..151468758,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:151468721..151468758,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr4:151468721..151468758,- | |||
|id=chr4:151468721..151468758,- | |||
|ontology_enrichment_celltype=CL:0002586!4.99e-16!3;CL:0000149!2.92e-12!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;9.45e-18;3!CL:0000149;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.12e-17,3;CL:0000149,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.45e-18;3 | |||
|ontology_enrichment_disease=DOID:2355!3.85e-12!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!5.21e-21!5;UBERON:0005388!5.21e-21!5;UBERON:0001802!5.21e-21!5;UBERON:0005743!1.43e-16!86;UBERON:0001781!4.99e-16!3;UBERON:0001782!4.99e-16!3;UBERON:0005424!4.99e-16!3;UBERON:0001896!7.83e-16!3;UBERON:0005290!7.83e-16!3;UBERON:0010096!7.83e-16!3;UBERON:0000073!7.05e-15!94;UBERON:0001016!7.05e-15!94;UBERON:0003075!5.82e-14!86;UBERON:0007284!5.82e-14!86;UBERON:0003056!1.98e-13!61;UBERON:0002346!2.79e-13!90;UBERON:0002336!1.25e-12!1;UBERON:0001018!1.25e-12!1;UBERON:0002473!1.25e-12!1;UBERON:0005340!1.25e-12!1;UBERON:0002316!1.25e-12!1;UBERON:0003544!1.25e-12!1;UBERON:0001020!1.25e-12!1;UBERON:0005970!1.25e-12!1;UBERON:0002437!1.25e-12!1;UBERON:0000955!1.48e-11!69;UBERON:0006238!1.48e-11!69;UBERON:0001049!2.52e-11!57;UBERON:0005068!2.52e-11!57;UBERON:0006241!2.52e-11!57;UBERON:0007135!2.52e-11!57;UBERON:0000033!3.66e-11!123;UBERON:0002616!6.43e-11!59;UBERON:0000153!1.43e-10!129;UBERON:0007811!1.43e-10!129;UBERON:0001017!1.36e-09!82;UBERON:0000970!2.85e-09!20;UBERON:0002780!4.15e-09!41;UBERON:0001890!4.15e-09!41;UBERON:0006240!4.15e-09!41;UBERON:0003080!6.90e-09!42;UBERON:0002104!7.73e-09!21;UBERON:0007023!2.58e-08!115;UBERON:0000020!4.39e-08!23;UBERON:0002791!5.13e-08!33;UBERON:0001893!8.77e-08!34;UBERON:0001032!9.39e-08!24;UBERON:0004456!9.39e-08!24;UBERON:0004121!1.24e-07!169;UBERON:0000924!2.03e-07!173;UBERON:0006601!2.03e-07!173;UBERON:0000007!5.73e-07!2;UBERON:0005162!6.07e-07!2;UBERON:0000122!6.07e-07!2;UBERON:0001954!6.80e-07!2;UBERON:0003022!6.80e-07!2;UBERON:0002421!6.80e-07!2;UBERON:0002600!6.80e-07!2;UBERON:0001873!9.02e-07!2;UBERON:0010122!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.31e-40;5!UBERON:0005388;3.31e-40;5!UBERON:0001802;3.31e-40;5!UBERON:0001896;9.45e-18;3!UBERON:0001781;9.45e-18;3!UBERON:0001782;9.45e-18;3!UBERON:0005290;9.45e-18;3!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0000970;6.00e-11;20!UBERON:0002104;1.77e-10;21!UBERON:0001456;1.77e-10;21!UBERON:0000020;1.17e-09;23!UBERON:0002298;1.44e-09;6!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,9.87e-34,6;UBERON:0005388,9.87e-34,6;UBERON:0001802,9.87e-34,6;UBERON:0001896,9.46e-18,3;UBERON:0005290,9.46e-18,3;UBERON:0010096,9.46e-18,3;UBERON:0001782,1.12e-17,3;UBERON:0005424,1.12e-17,3;UBERON:0001781,1.29e-13,4;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0000970,1.77e-10,21;UBERON:0002104,1.77e-10,21;UBERON:0001456,4.74e-10,22;UBERON:0002298,1.44e-09,6;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0005085,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0,30.7133969558432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:151468721..151468758,- | |||
}} |
Latest revision as of 02:12, 30 July 2015
Short description: | p@chr4:151468721..151468758, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:151468721..151468758, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.12e-17 | 3 |
visual pigment cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 9.87e-34 | 6 |
photoreceptor array | 9.87e-34 | 6 |
posterior segment of eyeball | 9.87e-34 | 6 |
medulla oblongata | 9.46e-18 | 3 |
myelencephalon | 9.46e-18 | 3 |
future myelencephalon | 9.46e-18 | 3 |
pigmented layer of retina | 1.12e-17 | 3 |
presumptive retinal pigmented epithelium | 1.12e-17 | 3 |
layer of retina | 1.29e-13 | 4 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
eye | 1.77e-10 | 21 |
visual system | 1.77e-10 | 21 |
face | 4.74e-10 | 22 |
brainstem | 1.44e-09 | 6 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
ectodermal placode | 1.99e-07 | 31 |