FFCP PHASE1:Hg19::chr4:139163491..139163510,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23657 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11059 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPY5,A8K2U4 | |||
|association_with_transcript=0bp_to_ENST00000280612,NM_014331,uc011chb.1_5end | |||
|cluster_id=chr4:139163491..139163510,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SLC7A11_5end | |||
|id=chr4:139163491..139163510,- | |||
|ontology_enrichment_celltype=CL:0000548!4.83e-14!679;CL:0000004!4.83e-14!679;CL:0000255!4.83e-14!679;CL:0000012!1.21e-13!682;CL:0000063!6.57e-13!578;CL:0002194!5.26e-12!63;CL:0000576!5.26e-12!63;CL:0000040!5.26e-12!63;CL:0000559!5.26e-12!63;CL:0002009!5.94e-12!65;CL:0000860!8.52e-12!45;CL:0002057!1.61e-10!42;CL:0000839!7.44e-10!70;CL:0000066!1.08e-09!254;CL:0000766!3.33e-09!76;CL:0000557!7.40e-09!71;CL:0000003!1.35e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-15;33!CL:0002057;1.57e-15;33!CL:0000473;3.61e-13;39!CL:0000234;3.61e-13;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.50e-11,48;CL:0000234,4.50e-11,48;CL:0002194,7.89e-11,59;CL:0000576,7.89e-11,59;CL:0000040,7.89e-11,59;CL:0000559,7.89e-11,59;CL:0002009,8.74e-11,61;CL:0000860,1.54e-10,42;CL:0002057,1.54e-10,42;CL:0000066,1.40e-09,253;CL:0000839,8.80e-09,66;CL:0000766,3.24e-08,72;CL:0000557,7.22e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-08;42 | |||
|ontology_enrichment_disease=DOID:305!7.62e-10!106;DOID:0050687!1.22e-09!143;DOID:14566!1.47e-07!239;DOID:162!2.00e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.51e-10,106;DOID:0050687,1.54e-09,143;DOID:14566,1.65e-07,239;DOID:162,2.24e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.63e-08!86;UBERON:0004765!8.57e-08!101;UBERON:0001434!8.57e-08!101;UBERON:0002371!3.31e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.09e-07,82 | |||
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| |||
|short_description=p1@SLC7A11 | |||
}} |
Latest revision as of 05:44, 25 September 2015
Short description: | p1@SLC7A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC7A11_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000280612, NM_014331, uc011chb.1_5end |
EntrezGene: | SLC7A11 |
HGNC: | 11059 |
UniProt: | Q9UPY5A8K2U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.50e-11 | 48 |
phagocyte | 4.50e-11 | 48 |
monopoietic cell | 7.89e-11 | 59 |
monocyte | 7.89e-11 | 59 |
monoblast | 7.89e-11 | 59 |
promonocyte | 7.89e-11 | 59 |
macrophage dendritic cell progenitor | 8.74e-11 | 61 |
classical monocyte | 1.54e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-10 | 42 |
epithelial cell | 1.40e-09 | 253 |
myeloid lineage restricted progenitor cell | 8.80e-09 | 66 |
myeloid leukocyte | 3.24e-08 | 72 |
granulocyte monocyte progenitor cell | 7.22e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.09e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.51e-10 | 106 |
cell type cancer | 1.54e-09 | 143 |
disease of cellular proliferation | 1.65e-07 | 239 |
cancer | 2.24e-07 | 235 |