FFCP PHASE1:Hg19::chrX:100129283..100129294,-: Difference between revisions
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|id=chrX:100129283..100129294,-
|short_description=p1@NOX1
|description=CAGE_peak_1_at_NOX1_5end
|association_with_transcript=39bp_to_ENST00000372957,ENST0000037296...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27035 | |EntrezGene=27035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7889 | |HGNC=7889 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC60,Q5H9D4,Q9Y5S8 | |UniProt=E9PC60,Q5H9D4,Q9Y5S8 | ||
|association_with_transcript=39bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end | |||
|cluster_id=chrX:100129283..100129294,- | |||
|description=CAGE_peak_1_at_NOX1_5end | |||
|id=chrX:100129283..100129294,- | |||
|ontology_enrichment_celltype=CL:0000077!4.78e-20!19;CL:0002231!3.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.59e-28;19!CL:0002097;4.83e-07;2!CL:0002253;6.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.25e-28,19;CL:0000076,1.90e-10,63;CL:0000213,7.89e-09,58;CL:0000215,7.89e-09,58;CL:0002097,4.83e-07,2;CL:0002253,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.05e-12;1!UBERON:0001045;3.26e-12;1!UBERON:0007297;5.57e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!4.61e-16!11;UBERON:0001155!6.03e-14!9;UBERON:0000160!3.22e-10!27;UBERON:0004907!1.19e-09!5;UBERON:0001046!1.34e-08!19;UBERON:0006947!6.98e-08!3;UBERON:0004054!6.98e-08!3;UBERON:0005409!1.16e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;1.65e-35;11!UBERON:0001155;1.70e-30;9!UBERON:0000160;3.63e-29;17!UBERON:0005409;1.02e-22;22!UBERON:0004907;2.43e-20;5!UBERON:0006947;4.29e-16;3!UBERON:0004054;4.29e-16;3!UBERON:0004921;1.68e-15;33!UBERON:0001000;1.05e-12;1!UBERON:0000998;1.05e-12;1!UBERON:0006868;1.05e-12;1!UBERON:0005352;1.05e-12;1!UBERON:0005904;2.61e-12;4!UBERON:0001154;3.26e-12;1!UBERON:0001153;3.26e-12;1!UBERON:0009854;3.26e-12;1!UBERON:0001052;5.25e-12;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.30e-35,11;UBERON:0001155,1.45e-30,9;UBERON:0000160,3.40e-29,17;UBERON:0004907,2.43e-20,5;UBERON:0005409,4.72e-20,25;UBERON:0006947,4.30e-16,3;UBERON:0004054,4.30e-16,3;UBERON:0000998,9.92e-13,1;UBERON:0006868,9.92e-13,1;UBERON:0001000,1.11e-12,1;UBERON:0005352,1.11e-12,1;UBERON:0005904,2.61e-12,4;UBERON:0001154,3.85e-12,1;UBERON:0001153,3.85e-12,1;UBERON:0001045,3.85e-12,1;UBERON:0001052,4.83e-12,4 | |||
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|short_description=p1@NOX1 | |||
}} | }} |
Latest revision as of 17:43, 18 September 2015
Short description: | p1@NOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000372957, ENST00000372961, ENST00000372966, NM_007052, NM_013955, uc004egj.2, uc004egl.3, uc010nne.2_5end |
EntrezGene: | NOX1 |
HGNC: | 7889 |
UniProt: | E9PC60Q5H9D4Q9Y5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.25e-28 | 19 |
squamous epithelial cell | 1.90e-10 | 63 |
lining cell | 7.89e-09 | 58 |
barrier cell | 7.89e-09 | 58 |
cortical cell of adrenal gland | 4.83e-07 | 2 |
epithelial cell of large intestine | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.30e-35 | 11 |
colon | 1.45e-30 | 9 |
intestine | 3.40e-29 | 17 |
lower digestive tract | 2.43e-20 | 5 |
gastrointestinal system | 4.72e-20 | 25 |
male genital duct | 4.30e-16 | 3 |
internal male genitalia | 4.30e-16 | 3 |
seminal vesicle | 9.92e-13 | 1 |
seminal fluid secreting gland | 9.92e-13 | 1 |
vas deferens | 1.11e-12 | 1 |
spermatic cord | 1.11e-12 | 1 |
duct of male reproductive system | 2.61e-12 | 4 |
vermiform appendix | 3.85e-12 | 1 |
caecum | 3.85e-12 | 1 |
midgut | 3.85e-12 | 1 |
rectum | 4.83e-12 | 4 |