FFCP PHASE1:Mm9::chr14:33277893..33277902,-: Difference between revisions
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{{FFCP|EntrezGene=20508|HGNC=|MCL_coexpression_id=353|UniProt=Q3TYJ1|association_with_transcript=133bp_to_NM_021712,uc007szb.1_5end|description=CAGE_peak_6_at_Slc18a3_5end|id=chr14:33277893..33277902,-|ontology_enrichment_celltype=CL:0000540!8.55e-10!33;CL:0000047!8.55e-10!33;CL:0000031!8.55e-10!33;CL:0000404!8.55e-10!33;CL:0002319!6.49e-09!43;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0000393!8.81e-08!39;CL:0000211!8.81e-08!39;CL:0000117!1.65e-07!23;CL:0000337!1.65e-07!23;CL:0000055!3.80e-07!50;CL:0002612!3.86e-07!3|ontology_enrichment_celltype_v019_2=CL:0002611,3.12e-12,2;CL:0002612,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!2.07e-13!6;UBERON:0005174!2.07e-13!6;UBERON:0001137!2.07e-13!6;UBERON:0003076!3.10e-11!12;UBERON:0003057!3.10e-11!12;UBERON:0001948!3.20e-11!5;UBERON:0002315!3.20e-11!5;UBERON:0004121!6.38e-10!102;UBERON:0000924!6.38e-10!102;UBERON:0006601!6.38e-10!102;UBERON:0002346!1.09e-09!71;UBERON:0003075!1.09e-09!71;UBERON:0007284!1.09e-09!71;UBERON:0000073!1.10e-09!75;UBERON:0001016!1.10e-09!75;UBERON:0001017!3.76e-09!73;UBERON:0005743!3.76e-09!73;UBERON:0002005!2.27e-07!3;UBERON:0005428!2.27e-07!3;UBERON:0002257!3.86e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.62e-33,6;UBERON:0005174,2.62e-33,6;UBERON:0001137,2.62e-33,6;UBERON:0003076,1.21e-29,12;UBERON:0003057,1.21e-29,12;UBERON:0001948,2.61e-18,5;UBERON:0002315,2.61e-18,5;UBERON:0002256,3.12e-12,2;UBERON:0001896,4.02e-12,2;UBERON:0002298,4.02e-12,2;UBERON:0005290,4.02e-12,2;UBERON:0010096,4.02e-12,2;UBERON:0000489,3.13e-10,21;UBERON:0002257,1.88e-08,3;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,0.441737081903227,0,0,0,0,0.127687338085188,0.614426133024974,0,0,0,0.837548997004143,0,0.15279824777681,1.17851434189467,0.284743361598206,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0.180062129805349,0,0.340182495756639,0.384341160854549,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.749431733813838,0,0,0,0,0|short_description=p6@Slc18a3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20508 | |||
|HGNC= | |||
|MCL_coexpression_id=353 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TYJ1 | |||
|association_with_transcript=133bp_to_NM_021712,uc007szb.1_5end | |||
|cluster_id=chr14:33277893..33277902,- | |||
|description=CAGE_peak_6_at_Slc18a3_5end | |||
|id=chr14:33277893..33277902,- | |||
|ontology_enrichment_celltype=CL:0000540!8.55e-10!33;CL:0000047!8.55e-10!33;CL:0000031!8.55e-10!33;CL:0000404!8.55e-10!33;CL:0002319!6.49e-09!43;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0000393!8.81e-08!39;CL:0000211!8.81e-08!39;CL:0000117!1.65e-07!23;CL:0000337!1.65e-07!23;CL:0000055!3.80e-07!50;CL:0002612!3.86e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.12e-12,2;CL:0002612,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!2.07e-13!6;UBERON:0005174!2.07e-13!6;UBERON:0001137!2.07e-13!6;UBERON:0003076!3.10e-11!12;UBERON:0003057!3.10e-11!12;UBERON:0001948!3.20e-11!5;UBERON:0002315!3.20e-11!5;UBERON:0004121!6.38e-10!102;UBERON:0000924!6.38e-10!102;UBERON:0006601!6.38e-10!102;UBERON:0002346!1.09e-09!71;UBERON:0003075!1.09e-09!71;UBERON:0007284!1.09e-09!71;UBERON:0000073!1.10e-09!75;UBERON:0001016!1.10e-09!75;UBERON:0001017!3.76e-09!73;UBERON:0005743!3.76e-09!73;UBERON:0002005!2.27e-07!3;UBERON:0005428!2.27e-07!3;UBERON:0002257!3.86e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.62e-33,6;UBERON:0005174,2.62e-33,6;UBERON:0001137,2.62e-33,6;UBERON:0003076,1.21e-29,12;UBERON:0003057,1.21e-29,12;UBERON:0001948,2.61e-18,5;UBERON:0002315,2.61e-18,5;UBERON:0002256,3.12e-12,2;UBERON:0001896,4.02e-12,2;UBERON:0002298,4.02e-12,2;UBERON:0005290,4.02e-12,2;UBERON:0010096,4.02e-12,2;UBERON:0000489,3.13e-10,21;UBERON:0002257,1.88e-08,3;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,0.441737081903227,0,0,0,0,0.127687338085188,0.614426133024974,0,0,0,0.837548997004143,0,0.15279824777681,1.17851434189467,0.284743361598206,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0.180062129805349,0,0.340182495756639,0.384341160854549,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.749431733813838,0,0,0,0,0 | |||
|short_description=p6@Slc18a3 | |||
}} |
Latest revision as of 21:53, 25 September 2015
Short description: | p6@Slc18a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc18a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | 133bp_to_NM_021712, uc007szb.1_5end |
EntrezGene: | Slc18a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.12e-12 | 2 |
neuron of the ventral spinal cord | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.62e-33 | 6 |
dorsal region element | 2.62e-33 | 6 |
dorsum | 2.62e-33 | 6 |
posterior neural tube | 1.21e-29 | 12 |
chordal neural plate | 1.21e-29 | 12 |
regional part of spinal cord | 2.61e-18 | 5 |
gray matter of spinal cord | 2.61e-18 | 5 |
dorsal horn of spinal cord | 3.12e-12 | 2 |
medulla oblongata | 4.02e-12 | 2 |
brainstem | 4.02e-12 | 2 |
myelencephalon | 4.02e-12 | 2 |
future myelencephalon | 4.02e-12 | 2 |
cavitated compound organ | 3.13e-10 | 21 |
ventral horn of spinal cord | 1.88e-08 | 3 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |