FFCP PHASE1:Mm9::chr14:16190691..16190692,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2097|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:16190691..16190692,+|id=chr14:16190691..16190692,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,8.48e-27,6;CL:0000677,8.48e-27,6;CL:0000584,8.48e-27,6;CL:0000075,4.10e-23,7;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0002563,3.44e-18,9;CL:0002251,3.44e-18,9;CL:0002076,2.92e-11,15;CL:0002476,6.19e-10,2;CL:0000223,1.22e-08,20;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0000066,4.66e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.44e-18,9;UBERON:0004808,3.44e-18,9;UBERON:0001277,3.44e-18,9;UBERON:0000485,4.78e-15,11;UBERON:0001242,7.26e-13,13;UBERON:0001262,7.26e-13,13;UBERON:0004786,7.26e-13,13;UBERON:0000344,2.92e-11,15;UBERON:0004923,2.53e-07,24|phase1_expression=0,0,0,4.83942738090928,3.00537437967808,0,1.16806320297763,0.129123323441576,0.281577444303333,0,0,0,0.171200729931206,0,0,0.404950534779652,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0.95995453676044,0.91763712426868,0,0,0,0.760093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,4.30211938490693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818462086339379,0,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr14:16190691..16190692,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2097 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:16190691..16190692,+ | |||
|description=CAGE_peak_at_chr14:16190691..16190692,+ | |||
|id=chr14:16190691..16190692,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.48e-27,6;CL:0000677,8.48e-27,6;CL:0000584,8.48e-27,6;CL:0000075,4.10e-23,7;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0002563,3.44e-18,9;CL:0002251,3.44e-18,9;CL:0002076,2.92e-11,15;CL:0002476,6.19e-10,2;CL:0000223,1.22e-08,20;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0000066,4.66e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.44e-18,9;UBERON:0004808,3.44e-18,9;UBERON:0001277,3.44e-18,9;UBERON:0000485,4.78e-15,11;UBERON:0001242,7.26e-13,13;UBERON:0001262,7.26e-13,13;UBERON:0004786,7.26e-13,13;UBERON:0000344,2.92e-11,15;UBERON:0004923,2.53e-07,24 | |||
|phase1_expression=0,0,0,4.83942738090928,3.00537437967808,0,1.16806320297763,0.129123323441576,0.281577444303333,0,0,0,0.171200729931206,0,0,0.404950534779652,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0.95995453676044,0.91763712426868,0,0,0,0.760093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,4.30211938490693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818462086339379,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr14:16190691..16190692,+ | |||
}} |
Latest revision as of 01:47, 4 August 2015
Short description: | p@chr14:16190691..16190692, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:16190691..16190692, + |
Coexpression cluster: | MCL_coexpression_mm9:2097 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.48e-27 | 6 |
gut absorptive cell | 8.48e-27 | 6 |
enterocyte | 8.48e-27 | 6 |
columnar/cuboidal epithelial cell | 4.10e-23 | 7 |
fibroblast | 7.74e-19 | 1 |
hepatic stellate cell | 7.74e-19 | 1 |
intestinal epithelial cell | 3.44e-18 | 9 |
epithelial cell of alimentary canal | 3.44e-18 | 9 |
endo-epithelial cell | 2.92e-11 | 15 |
bone marrow macrophage | 6.19e-10 | 2 |
endodermal cell | 1.22e-08 | 20 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |
epithelial cell | 4.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.44e-18 | 9 |
gastrointestinal system epithelium | 3.44e-18 | 9 |
intestinal epithelium | 3.44e-18 | 9 |
simple columnar epithelium | 4.78e-15 | 11 |
intestinal mucosa | 7.26e-13 | 13 |
wall of intestine | 7.26e-13 | 13 |
gastrointestinal system mucosa | 7.26e-13 | 13 |
mucosa | 2.92e-11 | 15 |
organ component layer | 2.53e-07 | 24 |