FFCP PHASE1:Hg19::chr3:98241684..98241696,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1322 | |||
|TSSclassifier=strong | |||
|UniProt=D6RDY1,D6RDP6,D6RHI6,D6R9S8 | |||
|association_with_transcript=0bp_to_ENST00000507944,ENST00000508071,ENST00000513130,ENST00000514537_5end | |||
|cluster_id=chr3:98241684..98241696,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_CLDND1_5end | |||
|id=chr3:98241684..98241696,- | |||
|ontology_enrichment_celltype=CL:0000084!1.80e-10!25;CL:0000827!1.80e-10!25;CL:0000791!2.60e-10!18;CL:0000789!2.60e-10!18;CL:0002420!2.60e-10!18;CL:0002419!2.60e-10!18;CL:0000790!2.60e-10!18;CL:0000738!3.85e-09!140;CL:0000838!1.97e-07!52;CL:0000037!2.21e-07!172;CL:0000566!2.21e-07!172;CL:0000988!4.70e-07!182;CL:0000542!5.29e-07!53;CL:0000051!5.29e-07!53;CL:0000625!7.71e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.31e-17;18!CL:0000789;4.31e-17;18!CL:0002419;4.31e-17;18!CL:0000084;4.85e-16;25!CL:0000625;3.65e-11;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.08e-17,18;CL:0000789,2.08e-17,18;CL:0002420,2.08e-17,18;CL:0002419,2.08e-17,18;CL:0000790,2.08e-17,18;CL:0000084,2.74e-16,25;CL:0000827,2.74e-16,25;CL:0000625,1.77e-11,11;CL:0000738,7.82e-11,136;CL:0000838,1.36e-09,52;CL:0000542,2.70e-09,53;CL:0000051,2.70e-09,53;CL:0000037,4.14e-08,168;CL:0002087,1.70e-07,115;CL:0002032,2.07e-07,161;CL:0000837,2.07e-07,161;CL:0000988,4.09e-07,177;CL:0002031,5.60e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;4.31e-17;18!UBERON:0006601;1.61e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.65e-23!57;UBERON:0005068!8.65e-23!57;UBERON:0006241!8.65e-23!57;UBERON:0007135!8.65e-23!57;UBERON:0001017!3.15e-21!82;UBERON:0005743!5.89e-21!86;UBERON:0000955!1.22e-20!69;UBERON:0006238!1.22e-20!69;UBERON:0000073!2.27e-20!94;UBERON:0001016!2.27e-20!94;UBERON:0002616!4.04e-18!59;UBERON:0002780!4.32e-18!41;UBERON:0001890!4.32e-18!41;UBERON:0006240!4.32e-18!41;UBERON:0001893!1.88e-17!34;UBERON:0002020!1.90e-17!34;UBERON:0003528!1.90e-17!34;UBERON:0003080!3.92e-17!42;UBERON:0002791!8.58e-17!33;UBERON:0001869!5.08e-16!32;UBERON:0003075!1.66e-14!86;UBERON:0007284!1.66e-14!86;UBERON:0007023!1.26e-13!115;UBERON:0002619!5.31e-13!22;UBERON:0002346!6.17e-13!90;UBERON:0000153!3.64e-12!129;UBERON:0007811!3.64e-12!129;UBERON:0001950!1.00e-11!20;UBERON:0000956!1.39e-11!25;UBERON:0000203!1.39e-11!25;UBERON:0000033!4.93e-11!123;UBERON:0003056!7.63e-11!61;UBERON:0004121!1.65e-09!169;UBERON:0000924!1.01e-08!173;UBERON:0006601!1.01e-08!173;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9;UBERON:0002420!1.93e-07!9;UBERON:0007245!1.93e-07!9;UBERON:0010009!1.93e-07!9;UBERON:0010011!1.93e-07!9;UBERON:0000454!1.93e-07!9;UBERON:0003076!7.01e-07!15;UBERON:0003057!7.01e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.21e-30;34!UBERON:0002020;1.21e-30;34!UBERON:0001893;1.99e-30;34!UBERON:0002791;6.35e-30;32!UBERON:0001869;7.62e-30;32!UBERON:0002619;2.44e-27;22!UBERON:0002780;4.72e-26;41!UBERON:0001890;4.72e-26;41!UBERON:0000073;7.78e-25;53!UBERON:0002616;7.78e-25;53!UBERON:0001950;1.83e-24;20!UBERON:0000956;2.36e-23;25!UBERON:0000203;2.36e-23;25!UBERON:0000955;3.22e-17;68!UBERON:0001017;4.93e-17;75!UBERON:0000125;3.87e-15;9!UBERON:0002308;3.87e-15;9!UBERON:0002420;9.61e-15;9!UBERON:0007245;9.61e-15;9!UBERON:0010009;9.61e-15;9!UBERON:0010011;9.61e-15;9!UBERON:0000454;9.61e-15;9!UBERON:0001016;1.13e-14;83!UBERON:0009663;5.08e-12;7!UBERON:0004732;1.19e-11;13!UBERON:0002298;5.43e-11;6!UBERON:0004733;3.66e-10;12!UBERON:0002028;3.66e-10;12!UBERON:0000200;6.28e-10;6!UBERON:0000349;9.33e-09;5!UBERON:0002021;2.05e-08;5!UBERON:0001871;4.66e-08;6!UBERON:0007023;3.14e-07;114!UBERON:0000369;3.65e-07;4!UBERON:0002435;3.65e-07;4!UBERON:0000204;3.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.31e-50,56;UBERON:0005068,9.31e-50,56;UBERON:0006241,9.31e-50,56;UBERON:0007135,9.31e-50,56;UBERON:0000073,2.13e-45,53;UBERON:0002616,2.13e-45,53;UBERON:0001017,4.10e-39,81;UBERON:0000955,5.82e-39,68;UBERON:0006238,5.82e-39,68;UBERON:0001893,1.88e-36,34;UBERON:0003528,1.93e-36,34;UBERON:0002020,1.93e-36,34;UBERON:0002780,3.50e-36,41;UBERON:0001890,3.50e-36,41;UBERON:0003080,3.50e-36,41;UBERON:0006240,3.50e-36,41;UBERON:0001016,2.01e-35,89;UBERON:0002791,2.33e-33,32;UBERON:0001869,3.15e-33,32;UBERON:0003075,5.44e-31,82;UBERON:0007284,5.44e-31,82;UBERON:0002346,7.69e-29,86;UBERON:0002619,3.08e-27,22;UBERON:0001950,2.34e-24,20;UBERON:0000956,2.89e-23,25;UBERON:0000203,2.89e-23,25;UBERON:0003056,1.60e-22,61;UBERON:0010371,2.47e-22,104;UBERON:0007023,6.35e-20,114;UBERON:0010314,2.59e-16,132;UBERON:0000125,3.75e-15,9;UBERON:0002308,3.75e-15,9;UBERON:0002420,8.80e-15,9;UBERON:0007245,8.80e-15,9;UBERON:0010009,8.80e-15,9;UBERON:0010011,8.80e-15,9;UBERON:0000454,8.80e-15,9;UBERON:0003076,2.78e-14,15;UBERON:0003057,2.78e-14,15;UBERON:0004121,2.35e-12,171;UBERON:0000924,2.35e-12,171;UBERON:0006601,2.35e-12,171;UBERON:0009663,4.94e-12,7;UBERON:0004732,1.06e-11,13;UBERON:0002298,5.36e-11,6;UBERON:0004733,3.27e-10,12;UBERON:0002028,3.27e-10,12;UBERON:0007277,3.27e-10,12;UBERON:0000200,5.05e-10,6;UBERON:0011216,3.49e-09,223;UBERON:0000349,8.76e-09,5;UBERON:0000025,3.00e-08,192;UBERON:0002021,3.02e-08,5;UBERON:0001871,5.26e-08,6;UBERON:0000369,3.56e-07,4;UBERON:0002435,3.56e-07,4;UBERON:0000204,3.56e-07,4;UBERON:0010082,3.56e-07,4 | |||
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| |||
|short_description=p4@CLDND1 | |||
}} |
Latest revision as of 21:49, 19 September 2015
Short description: | p4@CLDND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLDND1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000507944, ENST00000508071, ENST00000513130, ENST00000514537_5end |
EntrezGene: | CLDND1 |
HGNC: | 1322 |
UniProt: | D6RDY1D6RDP6D6RHI6D6R9S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.08e-17 | 18 |
alpha-beta T cell | 2.08e-17 | 18 |
immature T cell | 2.08e-17 | 18 |
mature T cell | 2.08e-17 | 18 |
immature alpha-beta T cell | 2.08e-17 | 18 |
T cell | 2.74e-16 | 25 |
pro-T cell | 2.74e-16 | 25 |
CD8-positive, alpha-beta T cell | 1.77e-11 | 11 |
leukocyte | 7.82e-11 | 136 |
lymphoid lineage restricted progenitor cell | 1.36e-09 | 52 |
lymphocyte | 2.70e-09 | 53 |
common lymphoid progenitor | 2.70e-09 | 53 |
hematopoietic stem cell | 4.14e-08 | 168 |
nongranular leukocyte | 1.70e-07 | 115 |
hematopoietic oligopotent progenitor cell | 2.07e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-07 | 161 |
hematopoietic cell | 4.09e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 5.60e-07 | 120 |