FFCP PHASE1:Mm9::chr13:34045100..34045111,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:34045100..34045111,+|id=chr13:34045100..34045111,+|ontology_enrichment_celltype=CL:0000473!6.98e-10!3;CL:0000627!6.98e-10!3;CL:0000682!6.98e-10!3;CL:0000239!4.00e-08!6;CL:0000677!4.00e-08!6;CL:0000212!4.00e-08!6;CL:0000584!4.00e-08!6;CL:0000075!5.94e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,3.30e-18,3;CL:0000239,2.39e-15,6;CL:0000677,2.39e-15,6;CL:0000584,2.39e-15,6;CL:0000075,3.43e-13,7;CL:0000066,1.22e-10,25;CL:0002563,2.63e-10,9;CL:0002251,2.63e-10,9;CL:0000473,4.20e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.80e-17!43;UBERON:0005409!2.59e-11!59;UBERON:0000344!4.72e-11!15;UBERON:0001242!2.18e-07!13;UBERON:0000060!2.18e-07!13;UBERON:0001262!2.18e-07!13;UBERON:0004786!2.18e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.71e-20,31;UBERON:0000344,1.37e-17,15;UBERON:0005409,9.41e-13,47;UBERON:0001962,8.24e-12,2;UBERON:0001961,8.24e-12,2;UBERON:0001744,8.24e-12,2;UBERON:0001242,9.05e-11,13;UBERON:0001262,9.05e-11,13;UBERON:0004786,9.05e-11,13;UBERON:0004923,9.11e-11,24;UBERON:0003350,2.63e-10,9;UBERON:0004808,2.63e-10,9;UBERON:0001277,2.63e-10,9;UBERON:0000485,1.83e-08,11;UBERON:0002465,3.61e-08,3;UBERON:0003199,6.09e-07,1|phase1_expression=0,4.88565570695105,2.27499619694768,0,0,1.51091344720701,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.2940928106717,3.44539178469012,3.87685796543167,5.17130958446134,0.190023419456374,0,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11189021922435,0.760902504450237,0.474529061544512,1.97638745668813,2.76468729680296,0.994782360205754,1.75467678407208,1.79763881730844,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0.685738504770831,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr13:34045100..34045111,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:34045100..34045111,+ | |||
|description=CAGE_peak_at_chr13:34045100..34045111,+ | |||
|id=chr13:34045100..34045111,+ | |||
|ontology_enrichment_celltype=CL:0000473!6.98e-10!3;CL:0000627!6.98e-10!3;CL:0000682!6.98e-10!3;CL:0000239!4.00e-08!6;CL:0000677!4.00e-08!6;CL:0000212!4.00e-08!6;CL:0000584!4.00e-08!6;CL:0000075!5.94e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.30e-18,3;CL:0000239,2.39e-15,6;CL:0000677,2.39e-15,6;CL:0000584,2.39e-15,6;CL:0000075,3.43e-13,7;CL:0000066,1.22e-10,25;CL:0002563,2.63e-10,9;CL:0002251,2.63e-10,9;CL:0000473,4.20e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.80e-17!43;UBERON:0005409!2.59e-11!59;UBERON:0000344!4.72e-11!15;UBERON:0001242!2.18e-07!13;UBERON:0000060!2.18e-07!13;UBERON:0001262!2.18e-07!13;UBERON:0004786!2.18e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.71e-20,31;UBERON:0000344,1.37e-17,15;UBERON:0005409,9.41e-13,47;UBERON:0001962,8.24e-12,2;UBERON:0001961,8.24e-12,2;UBERON:0001744,8.24e-12,2;UBERON:0001242,9.05e-11,13;UBERON:0001262,9.05e-11,13;UBERON:0004786,9.05e-11,13;UBERON:0004923,9.11e-11,24;UBERON:0003350,2.63e-10,9;UBERON:0004808,2.63e-10,9;UBERON:0001277,2.63e-10,9;UBERON:0000485,1.83e-08,11;UBERON:0002465,3.61e-08,3;UBERON:0003199,6.09e-07,1 | |||
|phase1_expression=0,4.88565570695105,2.27499619694768,0,0,1.51091344720701,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.2940928106717,3.44539178469012,3.87685796543167,5.17130958446134,0.190023419456374,0,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11189021922435,0.760902504450237,0.474529061544512,1.97638745668813,2.76468729680296,0.994782360205754,1.75467678407208,1.79763881730844,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0.685738504770831,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr13:34045100..34045111,+ | |||
}} |
Latest revision as of 22:04, 5 August 2015
Short description: | p@chr13:34045100..34045111, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:34045100..34045111, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.30e-18 | 3 |
brush border epithelial cell | 2.39e-15 | 6 |
gut absorptive cell | 2.39e-15 | 6 |
enterocyte | 2.39e-15 | 6 |
columnar/cuboidal epithelial cell | 3.43e-13 | 7 |
epithelial cell | 1.22e-10 | 25 |
intestinal epithelial cell | 2.63e-10 | 9 |
epithelial cell of alimentary canal | 2.63e-10 | 9 |
defensive cell | 4.20e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.71e-20 | 31 |
mucosa | 1.37e-17 | 15 |
gastrointestinal system | 9.41e-13 | 47 |
gut-associated lymphoid tissue | 8.24e-12 | 2 |
mucosa-associated lymphoid tissue | 8.24e-12 | 2 |
lymphoid tissue | 8.24e-12 | 2 |
intestinal mucosa | 9.05e-11 | 13 |
wall of intestine | 9.05e-11 | 13 |
gastrointestinal system mucosa | 9.05e-11 | 13 |
organ component layer | 9.11e-11 | 24 |
epithelium of mucosa | 2.63e-10 | 9 |
gastrointestinal system epithelium | 2.63e-10 | 9 |
intestinal epithelium | 2.63e-10 | 9 |
simple columnar epithelium | 1.83e-08 | 11 |
lymphoid system | 3.61e-08 | 3 |
egg chamber | 6.09e-07 | 1 |