FFCP PHASE1:Hg19::chr9:88126069..88126080,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:88126069..88126080,-
|short_description=p@chr9:88126069..88126080,-
|description=CAGE_peak_at_chr9:88126069..88126080,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:88126069..88126080,- | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr9:88126069..88126080,- | |||
|id=chr9:88126069..88126080,- | |||
|ontology_enrichment_celltype=CL:0000349!5.59e-29!3;CL:0002577!5.59e-29!3;CL:0002536!8.54e-20!2;CL:0002195!5.44e-19!2;CL:0002571!5.44e-19!2;CL:0002541!2.32e-13!3;CL:0002537!2.45e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.04e-85;3!CL:0000349;1.97e-72;19!CL:0002536;4.77e-57;2!CL:0002541;1.09e-10;3!CL:0002537;6.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.04e-85,3;CL:0000349,1.97e-72,19;CL:0002536,4.77e-57,2;CL:0002541,1.09e-10,3;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.27e-52!14;UBERON:0000158!1.27e-52!14;UBERON:0003124!2.27e-33!7;UBERON:0000478!3.18e-30!24;UBERON:0001987!6.64e-22!4;UBERON:0004340!6.64e-22!4;UBERON:0000305!1.55e-21!7;UBERON:0004871!7.05e-19!8;UBERON:0000476!2.32e-13!3;UBERON:0000920!2.32e-13!3;UBERON:0006947!3.79e-13!3;UBERON:0004054!3.79e-13!3;UBERON:0006331!1.00e-12!3;UBERON:0004923!5.26e-12!57;UBERON:0001301!1.57e-10!1;UBERON:0001000!1.89e-10!1;UBERON:0005352!1.89e-10!1;UBERON:0002038!3.29e-10!1;UBERON:0009661!3.29e-10!1;UBERON:0005904!4.35e-10!4;UBERON:0002022!4.75e-10!1;UBERON:0004175!3.32e-09!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.24e-64;4!UBERON:0000478;1.82e-57;24!UBERON:0005631;3.51e-45;10!UBERON:0000158;3.51e-45;10!UBERON:0000305;1.03e-36;7!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3!UBERON:0000077;3.16e-10;27!UBERON:0004923;3.46e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.60e-98,14;UBERON:0000158,4.60e-98,14;UBERON:0003124,9.49e-65,7;UBERON:0001987,3.24e-64,4;UBERON:0004340,3.24e-64,4;UBERON:0000478,1.82e-57,24;UBERON:0000305,1.03e-36,7;UBERON:0004871,3.02e-32,8;UBERON:0004923,3.53e-21,66;UBERON:0000995,6.06e-13,21;UBERON:0005795,2.17e-12,22;UBERON:0003975,2.17e-12,22;UBERON:0004175,5.46e-11,25;UBERON:0000920,1.09e-10,3;UBERON:0000077,1.44e-09,29;UBERON:0003134,1.22e-07,37;UBERON:0000474,1.22e-07,37;UBERON:0003100,5.90e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,17.9121925146741,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,6.36567900037145,23.3009615314696,22.679271999726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,17.9121925146741,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,6.36567900037145,23.3009615314696,22.679271999726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:88126069..88126080,- | |||
}} | }} |
Latest revision as of 03:07, 1 August 2015
Short description: | p@chr9:88126069..88126080, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:88126069..88126080, - |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.04e-85 | 3 |
extraembryonic cell | 1.97e-72 | 19 |
amniotic epithelial cell | 4.77e-57 | 2 |
chorionic membrane mesenchymal stem cell | 1.09e-10 | 3 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.60e-98 | 14 |
membranous layer | 4.60e-98 | 14 |
chorion | 9.49e-65 | 7 |
placenta | 3.24e-64 | 4 |
allantois | 3.24e-64 | 4 |
extraembryonic structure | 1.82e-57 | 24 |
amnion | 1.03e-36 | 7 |
somatic layer of lateral plate mesoderm | 3.02e-32 | 8 |
organ component layer | 3.53e-21 | 66 |
uterus | 6.06e-13 | 21 |
embryonic uterus | 2.17e-12 | 22 |
internal female genitalia | 2.17e-12 | 22 |
internal genitalia | 5.46e-11 | 25 |
egg chorion | 1.09e-10 | 3 |
mixed endoderm/mesoderm-derived structure | 1.44e-09 | 29 |
female reproductive organ | 1.22e-07 | 37 |
female reproductive system | 1.22e-07 | 37 |
female organism | 5.90e-07 | 41 |