FFCP PHASE1:Hg19::chr9:87428808..87428822,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:87428808..87428822,+
|short_description=p36@NTRK2
|description=CAGE_peak_36_at_NTRK2_5end
|association_with_transcript=-164bp_to_AJ420458_5end
|EntrezGene...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4915 | |EntrezGene=4915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8032 | |HGNC=8032 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_AJ420458_5end | |||
|cluster_id=chr9:87428808..87428822,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_36_at_NTRK2_5end | |||
|id=chr9:87428808..87428822,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.91e-20;2!UBERON:0006601;7.16e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.12e-70!57;UBERON:0005068!1.12e-70!57;UBERON:0006241!1.12e-70!57;UBERON:0007135!1.12e-70!57;UBERON:0007023!1.78e-65!115;UBERON:0002616!1.39e-57!59;UBERON:0001017!1.73e-55!82;UBERON:0003080!8.47e-55!42;UBERON:0003075!5.84e-53!86;UBERON:0007284!5.84e-53!86;UBERON:0000955!1.37e-52!69;UBERON:0006238!1.37e-52!69;UBERON:0002780!1.67e-52!41;UBERON:0001890!1.67e-52!41;UBERON:0006240!1.67e-52!41;UBERON:0005743!2.16e-52!86;UBERON:0002346!4.46e-50!90;UBERON:0002020!2.30e-48!34;UBERON:0003528!2.30e-48!34;UBERON:0001893!1.14e-47!34;UBERON:0000073!2.32e-46!94;UBERON:0001016!2.32e-46!94;UBERON:0002791!1.44e-45!33;UBERON:0001869!5.10e-43!32;UBERON:0003056!1.48e-37!61;UBERON:0000033!2.11e-31!123;UBERON:0002619!2.56e-31!22;UBERON:0000153!2.08e-29!129;UBERON:0007811!2.08e-29!129;UBERON:0000956!3.80e-27!25;UBERON:0000203!3.80e-27!25;UBERON:0001950!1.99e-26!20;UBERON:0004121!8.39e-26!169;UBERON:0000924!6.39e-25!173;UBERON:0006601!6.39e-25!173;UBERON:0002308!6.50e-25!9;UBERON:0000125!6.50e-25!9;UBERON:0002298!1.75e-21!8;UBERON:0002420!1.11e-19!9;UBERON:0007245!1.11e-19!9;UBERON:0010009!1.11e-19!9;UBERON:0010011!1.11e-19!9;UBERON:0000454!1.11e-19!9;UBERON:0009663!1.30e-19!7;UBERON:0000025!7.02e-18!194;UBERON:0003076!2.56e-16!15;UBERON:0003057!2.56e-16!15;UBERON:0004111!2.81e-16!241;UBERON:0000477!3.83e-14!286;UBERON:0000369!6.75e-12!4;UBERON:0002435!6.75e-12!4;UBERON:0000204!6.75e-12!4;UBERON:0010082!6.75e-12!4;UBERON:0000200!1.79e-11!6;UBERON:0000483!2.24e-11!309;UBERON:0000119!3.83e-11!312;UBERON:0004733!2.42e-10!12;UBERON:0002028!2.42e-10!12;UBERON:0007277!2.42e-10!12;UBERON:0000349!9.92e-10!5;UBERON:0006331!1.19e-09!3;UBERON:0002771!1.26e-09!3;UBERON:0005383!1.54e-09!3;UBERON:0005382!1.54e-09!3;UBERON:0004732!1.85e-09!13;UBERON:0000064!1.94e-09!219;UBERON:0000475!2.00e-09!365;UBERON:0002021!2.57e-09!5;UBERON:0000481!3.86e-09!347;UBERON:0001896!4.26e-09!3;UBERON:0005290!4.26e-09!3;UBERON:0010096!4.26e-09!3;UBERON:0000988!4.62e-09!3;UBERON:0001872!5.28e-09!5;UBERON:0001871!7.04e-09!7;UBERON:0002240!9.54e-09!3;UBERON:0000062!1.55e-07!511;UBERON:0001954!4.48e-07!2;UBERON:0003022!4.48e-07!2;UBERON:0002421!4.48e-07!2;UBERON:0002600!4.48e-07!2;UBERON:0001873!5.17e-07!2;UBERON:0010122!5.17e-07!2;UBERON:0002148!5.48e-07!2;UBERON:0009662!5.48e-07!2;UBERON:0001897!8.13e-07!2;UBERON:0001875!9.09e-07!2;UBERON:0006514!9.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.61e-52;34!UBERON:0002020;2.61e-52;34!UBERON:0002791;1.56e-48;32!UBERON:0001869;5.43e-44;32!UBERON:0001893;1.23e-42;34!UBERON:0002780;1.51e-40;41!UBERON:0001890;1.51e-40;41!UBERON:0002619;8.61e-40;22!UBERON:0000125;1.10e-37;9!UBERON:0002308;1.10e-37;9!UBERON:0000956;4.76e-35;25!UBERON:0000203;4.76e-35;25!UBERON:0001950;4.96e-28;20!UBERON:0000073;1.45e-27;53!UBERON:0002616;1.45e-27;53!UBERON:0002420;1.89e-26;9!UBERON:0007245;1.89e-26;9!UBERON:0010009;1.89e-26;9!UBERON:0010011;1.89e-26;9!UBERON:0000454;1.89e-26;9!UBERON:0009663;3.75e-22;7!UBERON:0000955;7.51e-21;68!UBERON:0002771;2.04e-20;2!UBERON:0001873;5.91e-20;2!UBERON:0001954;5.91e-20;2!UBERON:0002148;5.91e-20;2!UBERON:0006331;5.91e-20;2!UBERON:0009662;5.91e-20;2!UBERON:0003022;5.91e-20;2!UBERON:0002421;5.91e-20;2!UBERON:0002600;5.91e-20;2!UBERON:0001017;2.54e-19;75!UBERON:0000349;1.11e-17;5!UBERON:0001016;2.96e-15;83!UBERON:0000200;4.58e-15;6!UBERON:0002298;7.72e-15;6!UBERON:0000988;1.23e-13;3!UBERON:0005383;1.23e-13;3!UBERON:0005382;1.23e-13;3!UBERON:0001871;5.37e-13;6!UBERON:0002038;7.43e-11;1!UBERON:0003112;7.43e-11;1!UBERON:0011158;7.43e-11;1!UBERON:0009661;7.43e-11;1!UBERON:0002950;7.43e-11;1!UBERON:0003128;7.43e-11;1!UBERON:0001891;7.43e-11;1!UBERON:0001703;7.43e-11;1!UBERON:0002241;7.43e-11;1!UBERON:0000369;1.86e-10;4!UBERON:0002435;1.86e-10;4!UBERON:0000204;1.86e-10;4!UBERON:0007023;4.89e-09;114!UBERON:0001872;1.53e-08;5!UBERON:0002021;1.53e-08;5!UBERON:0011216;1.58e-08;132!UBERON:0004733;1.11e-07;12!UBERON:0002028;1.11e-07;12!UBERON:0004732;3.97e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.25e-67,34;UBERON:0002020,5.25e-67,34;UBERON:0001049,2.79e-57,56;UBERON:0005068,2.79e-57,56;UBERON:0006241,2.79e-57,56;UBERON:0007135,2.79e-57,56;UBERON:0000073,2.74e-54,53;UBERON:0002616,2.74e-54,53;UBERON:0002791,2.83e-54,32;UBERON:0001893,4.67e-51,34;UBERON:0002780,1.17e-48,41;UBERON:0001890,1.17e-48,41;UBERON:0003080,1.17e-48,41;UBERON:0006240,1.17e-48,41;UBERON:0001869,1.04e-46,32;UBERON:0000955,3.42e-46,68;UBERON:0006238,3.42e-46,68;UBERON:0001017,6.87e-43,81;UBERON:0002619,7.70e-40,22;UBERON:0003075,1.56e-38,82;UBERON:0007284,1.56e-38,82;UBERON:0001016,1.95e-38,89;UBERON:0000125,7.57e-38,9;UBERON:0002308,7.57e-38,9;UBERON:0002346,1.22e-36,86;UBERON:0000956,4.32e-35,25;UBERON:0000203,4.32e-35,25;UBERON:0003056,3.06e-32,61;UBERON:0007023,1.35e-30,114;UBERON:0010371,6.65e-30,104;UBERON:0001950,6.20e-28,20;UBERON:0002420,1.01e-26,9;UBERON:0007245,1.01e-26,9;UBERON:0010009,1.01e-26,9;UBERON:0010011,1.01e-26,9;UBERON:0000454,1.01e-26,9;UBERON:0010314,8.38e-26,132;UBERON:0009663,3.03e-22,7;UBERON:0002771,2.49e-20,2;UBERON:0001954,2.49e-20,2;UBERON:0003022,2.49e-20,2;UBERON:0002421,2.49e-20,2;UBERON:0002600,2.49e-20,2;UBERON:0001873,4.04e-20,2;UBERON:0010122,4.04e-20,2;UBERON:0002148,4.90e-20,2;UBERON:0006331,4.90e-20,2;UBERON:0009662,4.90e-20,2;UBERON:0004121,5.04e-19,171;UBERON:0000924,5.04e-19,171;UBERON:0006601,5.04e-19,171;UBERON:0000349,4.18e-18,5;UBERON:0011216,1.25e-15,223;UBERON:0000025,5.28e-15,192;UBERON:0000200,7.75e-15,6;UBERON:0002298,1.03e-14,6;UBERON:0005383,9.60e-14,3;UBERON:0005382,9.60e-14,3;UBERON:0000988,1.09e-13,3;UBERON:0001871,4.22e-13,6;UBERON:0004111,1.94e-11,240;UBERON:0003112,5.05e-11,1;UBERON:0011158,5.05e-11,1;UBERON:0003128,5.05e-11,1;UBERON:0001703,5.05e-11,1;UBERON:0002241,5.05e-11,1;UBERON:0004761,5.05e-11,1;UBERON:0009617,5.05e-11,1;UBERON:0002038,7.46e-11,1;UBERON:0009661,7.46e-11,1;UBERON:0002950,7.46e-11,1;UBERON:0001891,7.46e-11,1;UBERON:0009616,7.46e-11,1;UBERON:0010286,7.46e-11,1;UBERON:0000369,1.54e-10,4;UBERON:0002435,1.54e-10,4;UBERON:0000204,1.54e-10,4;UBERON:0010082,1.54e-10,4;UBERON:0003076,3.14e-10,15;UBERON:0003057,3.14e-10,15;UBERON:0002021,1.54e-08,5;UBERON:0001872,1.72e-08,5;UBERON:0000483,2.46e-08,306;UBERON:0000119,3.16e-08,309;UBERON:0004733,1.27e-07,12;UBERON:0002028,1.27e-07,12;UBERON:0007277,1.27e-07,12;UBERON:0004732,4.51e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,1.29875337426592,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,1.32656082487949,0,0.221158519862449,0,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.337005664903385,0.802577647298789,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.77064427945048,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.85125642439766,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0.327872630709804,0,0,3.29470915235301,1.1267183763585,1.14681839138014,0.887432412294818,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0.957803154342908,1.43581454968528,0,0.276629009856872,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.270150338473579,1.56215619722769,1.2401207790071,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.942693539496011,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.75836092965222,0,0,0,0,0,0.12729431655633,0.808468755832877,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,1.29875337426592,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,1.32656082487949,0,0.221158519862449,0,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.337005664903385,0.802577647298789,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.77064427945048,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.85125642439766,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0.327872630709804,0,0,3.29470915235301,1.1267183763585,1.14681839138014,0.887432412294818,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0.957803154342908,1.43581454968528,0,0.276629009856872,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.270150338473579,1.56215619722769,1.2401207790071,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.942693539496011,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.75836092965222,0,0,0,0,0,0.12729431655633,0.808468755832877,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p36@NTRK2 | |||
}} | }} |
Latest revision as of 01:31, 18 September 2015
Short description: | p36@NTRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_NTRK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -164bp_to_AJ420458_5end |
EntrezGene: | NTRK2 |
HGNC: | 8032 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data