FFCP PHASE1:Mm9::chr13:110693261..110693272,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=238871|HGNC=|MCL_coexpression_id=170|UniProt=F7BK43|association_with_transcript=-37bp_to_ENSMUST00000119672_5end|description=CAGE_peak_31_at_Pde4d_5end|id=chr13:110693261..110693272,+|ontology_enrichment_celltype=CL:0000791!5.91e-08!9;CL:0000789!5.91e-08!9;CL:0002420!5.91e-08!9;CL:0002419!5.91e-08!9;CL:0000790!5.91e-08!9;CL:0000624!4.49e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,5.48e-40,9;CL:0000789,5.48e-40,9;CL:0002420,5.48e-40,9;CL:0002419,5.48e-40,9;CL:0000790,5.48e-40,9;CL:0000624,4.23e-33,8;CL:0000084,1.11e-32,11;CL:0000827,1.11e-32,11;CL:0000838,6.15e-30,12;CL:0000542,1.29e-27,13;CL:0000051,1.29e-27,13;CL:0000738,4.76e-21,17;CL:0002087,4.76e-21,17;CL:0000893,5.92e-20,6;CL:0002489,5.92e-20,6;CL:0000898,5.92e-20,6;CL:0000809,5.92e-20,6;CL:0000810,5.92e-20,6;CL:0000895,5.92e-20,6;CL:0000808,5.92e-20,6;CL:0000894,5.92e-20,6;CL:0000806,5.92e-20,6;CL:0000807,5.92e-20,6;CL:0000805,5.92e-20,6;CL:0002425,5.92e-20,6;CL:0002436,5.92e-20,6;CL:0002427,5.92e-20,6;CL:0002428,5.92e-20,6;CL:0002429,5.92e-20,6;CL:0002433,5.92e-20,6;CL:0002431,5.92e-20,6;CL:0002432,5.92e-20,6;CL:0002031,3.38e-14,25;CL:0000988,5.34e-11,32;CL:0002032,5.34e-11,32;CL:0000037,5.34e-11,32;CL:0000837,5.34e-11,32;CL:0002293,7.26e-11,3;CL:0000625,6.23e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0002320,1.67e-07,46;CL:0000134,1.67e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!3.23e-11!24;UBERON:0001004!1.16e-10!42;UBERON:0002370!1.61e-10!23;UBERON:0000974!1.61e-10!23;UBERON:0004807!1.61e-10!23;UBERON:0005058!1.61e-10!23;UBERON:0003351!1.61e-10!23;UBERON:0009113!1.61e-10!23;UBERON:0003295!1.61e-10!23;UBERON:0009722!1.61e-10!23;UBERON:0005562!1.61e-10!23;UBERON:0007690!1.61e-10!23;UBERON:0000065!4.78e-10!41;UBERON:0006562!9.60e-10!24;UBERON:0001557!9.60e-10!24;UBERON:0001042!9.60e-10!24;UBERON:0008814!9.60e-10!24;UBERON:0009145!9.60e-10!24;UBERON:0000072!5.36e-09!27;UBERON:0004177!1.70e-07!29;UBERON:0000063!8.67e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.29e-11,23;UBERON:0000974,2.29e-11,23;UBERON:0004807,2.29e-11,23;UBERON:0005058,2.29e-11,23;UBERON:0003351,2.29e-11,23;UBERON:0009113,2.29e-11,23;UBERON:0003295,2.29e-11,23;UBERON:0009722,2.29e-11,23;UBERON:0005562,2.29e-11,23;UBERON:0007690,2.29e-11,23;UBERON:0006562,6.97e-11,24;UBERON:0003408,6.97e-11,24;UBERON:0001557,6.97e-11,24;UBERON:0001042,6.97e-11,24;UBERON:0008814,6.97e-11,24;UBERON:0009145,6.97e-11,24;UBERON:0000072,1.20e-09,27;UBERON:0004177,5.80e-09,29;UBERON:0005057,5.80e-09,29;UBERON:0002384,1.67e-07,46;UBERON:0000077,2.23e-07,35;UBERON:0007811,3.65e-07,36|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.54947988129892,1.267098499365,3.7450324211519,0.171217968225505,0.319088635981346,1.71200729931206,2.27293046289393,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0,0,0,0,0.251793635951155,0,0,0,0,0.219686182734472,0,0,0,0.335565212115473,10.8804321301702,5.04140698713696,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,7.11066703153331,0,0.506719730950197,0,0,0,0,0,0,0,0,0,0.125666591329675,0,1.3013942122792,0,0.323533699894818,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0.308534225774757,0.697601834251224,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0.491764273019036,0,0.321101179975584,0.35163505977661,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0,0,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0.968786560175433,0.180938774784468,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0.849892149969277,0.839708713941948,0.690999869022119,0,0,0.203319467126849,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0.288030006257865,0.948033361884535,0.810900861160657,0.102710957164827,0.25984164595559,0.179026695667481,0,0.480781798079875,0,0.302899349844443,0.609654453239999,0.504130925684203,0.38983152295901,0.865906574762965,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0.197008964751127,0,0.619747364743864,0,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,0.463735671240843|short_description=p31@Pde4d}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238871 | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|TSSclassifier=NA | |||
|UniProt=F7BK43 | |||
|association_with_transcript=-37bp_to_ENSMUST00000119672_5end | |||
|cluster_id=chr13:110693261..110693272,+ | |||
|description=CAGE_peak_31_at_Pde4d_5end | |||
|id=chr13:110693261..110693272,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.91e-08!9;CL:0000789!5.91e-08!9;CL:0002420!5.91e-08!9;CL:0002419!5.91e-08!9;CL:0000790!5.91e-08!9;CL:0000624!4.49e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.48e-40,9;CL:0000789,5.48e-40,9;CL:0002420,5.48e-40,9;CL:0002419,5.48e-40,9;CL:0000790,5.48e-40,9;CL:0000624,4.23e-33,8;CL:0000084,1.11e-32,11;CL:0000827,1.11e-32,11;CL:0000838,6.15e-30,12;CL:0000542,1.29e-27,13;CL:0000051,1.29e-27,13;CL:0000738,4.76e-21,17;CL:0002087,4.76e-21,17;CL:0000893,5.92e-20,6;CL:0002489,5.92e-20,6;CL:0000898,5.92e-20,6;CL:0000809,5.92e-20,6;CL:0000810,5.92e-20,6;CL:0000895,5.92e-20,6;CL:0000808,5.92e-20,6;CL:0000894,5.92e-20,6;CL:0000806,5.92e-20,6;CL:0000807,5.92e-20,6;CL:0000805,5.92e-20,6;CL:0002425,5.92e-20,6;CL:0002436,5.92e-20,6;CL:0002427,5.92e-20,6;CL:0002428,5.92e-20,6;CL:0002429,5.92e-20,6;CL:0002433,5.92e-20,6;CL:0002431,5.92e-20,6;CL:0002432,5.92e-20,6;CL:0002031,3.38e-14,25;CL:0000988,5.34e-11,32;CL:0002032,5.34e-11,32;CL:0000037,5.34e-11,32;CL:0000837,5.34e-11,32;CL:0002293,7.26e-11,3;CL:0000625,6.23e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0002320,1.67e-07,46;CL:0000134,1.67e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!3.23e-11!24;UBERON:0001004!1.16e-10!42;UBERON:0002370!1.61e-10!23;UBERON:0000974!1.61e-10!23;UBERON:0004807!1.61e-10!23;UBERON:0005058!1.61e-10!23;UBERON:0003351!1.61e-10!23;UBERON:0009113!1.61e-10!23;UBERON:0003295!1.61e-10!23;UBERON:0009722!1.61e-10!23;UBERON:0005562!1.61e-10!23;UBERON:0007690!1.61e-10!23;UBERON:0000065!4.78e-10!41;UBERON:0006562!9.60e-10!24;UBERON:0001557!9.60e-10!24;UBERON:0001042!9.60e-10!24;UBERON:0008814!9.60e-10!24;UBERON:0009145!9.60e-10!24;UBERON:0000072!5.36e-09!27;UBERON:0004177!1.70e-07!29;UBERON:0000063!8.67e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.29e-11,23;UBERON:0000974,2.29e-11,23;UBERON:0004807,2.29e-11,23;UBERON:0005058,2.29e-11,23;UBERON:0003351,2.29e-11,23;UBERON:0009113,2.29e-11,23;UBERON:0003295,2.29e-11,23;UBERON:0009722,2.29e-11,23;UBERON:0005562,2.29e-11,23;UBERON:0007690,2.29e-11,23;UBERON:0006562,6.97e-11,24;UBERON:0003408,6.97e-11,24;UBERON:0001557,6.97e-11,24;UBERON:0001042,6.97e-11,24;UBERON:0008814,6.97e-11,24;UBERON:0009145,6.97e-11,24;UBERON:0000072,1.20e-09,27;UBERON:0004177,5.80e-09,29;UBERON:0005057,5.80e-09,29;UBERON:0002384,1.67e-07,46;UBERON:0000077,2.23e-07,35;UBERON:0007811,3.65e-07,36 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.54947988129892,1.267098499365,3.7450324211519,0.171217968225505,0.319088635981346,1.71200729931206,2.27293046289393,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0,0,0,0,0.251793635951155,0,0,0,0,0.219686182734472,0,0,0,0.335565212115473,10.8804321301702,5.04140698713696,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,7.11066703153331,0,0.506719730950197,0,0,0,0,0,0,0,0,0,0.125666591329675,0,1.3013942122792,0,0.323533699894818,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0.308534225774757,0.697601834251224,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0.491764273019036,0,0.321101179975584,0.35163505977661,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0,0,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0.968786560175433,0.180938774784468,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0.849892149969277,0.839708713941948,0.690999869022119,0,0,0.203319467126849,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0.288030006257865,0.948033361884535,0.810900861160657,0.102710957164827,0.25984164595559,0.179026695667481,0,0.480781798079875,0,0.302899349844443,0.609654453239999,0.504130925684203,0.38983152295901,0.865906574762965,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0.197008964751127,0,0.619747364743864,0,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,0.463735671240843 | |||
|short_description=p31@Pde4d | |||
}} |
Latest revision as of 02:27, 27 September 2015
Short description: | p31@Pde4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_31_at_Pde4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | -37bp_to_ENSMUST00000119672_5end |
EntrezGene: | Pde4d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.29e-11 | 23 |
neck | 2.29e-11 | 23 |
respiratory system epithelium | 2.29e-11 | 23 |
hemolymphoid system gland | 2.29e-11 | 23 |
pharyngeal epithelium | 2.29e-11 | 23 |
thymic region | 2.29e-11 | 23 |
pharyngeal gland | 2.29e-11 | 23 |
entire pharyngeal arch endoderm | 2.29e-11 | 23 |
thymus primordium | 2.29e-11 | 23 |
early pharyngeal endoderm | 2.29e-11 | 23 |
pharynx | 6.97e-11 | 24 |
gland of gut | 6.97e-11 | 24 |
upper respiratory tract | 6.97e-11 | 24 |
chordate pharynx | 6.97e-11 | 24 |
pharyngeal arch system | 6.97e-11 | 24 |
pharyngeal region of foregut | 6.97e-11 | 24 |
segment of respiratory tract | 1.20e-09 | 27 |
hemopoietic organ | 5.80e-09 | 29 |
immune organ | 5.80e-09 | 29 |
connective tissue | 1.67e-07 | 46 |
mixed endoderm/mesoderm-derived structure | 2.23e-07 | 35 |
craniocervical region | 3.65e-07 | 36 |