FFCP PHASE1:Mm9::chr13:101322659..101322676,-: Difference between revisions
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{{FFCP|EntrezGene=18260|HGNC=|MCL_coexpression_id=12|UniProt=Q61146|association_with_transcript=0bp_to_ENSMUST00000022140_5end|description=CAGE_peak_3_at_Ocln_5end|id=chr13:101322659..101322676,-|ontology_enrichment_celltype=CL:0000066!1.24e-08!25;CL:0002563!5.31e-07!9;CL:0002251!5.31e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,2.15e-12,25;CL:0000223,3.36e-09,20;CL:0002563,5.87e-09,9;CL:0002251,5.87e-09,9;CL:0000075,2.99e-07,7;CL:0002076,3.41e-07,15;CL:0000239,9.06e-07,6;CL:0000677,9.06e-07,6;CL:0000584,9.06e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.02e-21!43;UBERON:0005409!2.91e-18!59;UBERON:0001007!2.85e-17!128;UBERON:0001555!2.85e-17!128;UBERON:0007026!2.85e-17!128;UBERON:0004119!4.90e-17!130;UBERON:0000925!4.90e-17!130;UBERON:0006595!4.90e-17!130;UBERON:0004921!4.28e-16!126;UBERON:0004185!4.28e-16!126;UBERON:0000344!4.81e-11!15;UBERON:0000481!3.71e-10!230;UBERON:0001242!9.93e-10!13;UBERON:0000060!9.93e-10!13;UBERON:0001262!9.93e-10!13;UBERON:0004786!9.93e-10!13;UBERON:0000466!2.30e-09!79;UBERON:0005177!9.18e-09!85;UBERON:0002108!1.16e-07!16;UBERON:0000485!2.11e-07!11;UBERON:0003350!5.31e-07!9;UBERON:0004808!5.31e-07!9;UBERON:0001277!5.31e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.88e-23,31;UBERON:0005409,7.14e-19,47;UBERON:0001007,8.31e-18,116;UBERON:0001555,8.31e-18,116;UBERON:0007026,8.31e-18,116;UBERON:0004119,4.29e-17,118;UBERON:0000925,4.29e-17,118;UBERON:0006595,4.29e-17,118;UBERON:0004921,2.21e-16,114;UBERON:0000344,1.93e-14,15;UBERON:0001242,1.18e-12,13;UBERON:0001262,1.18e-12,13;UBERON:0004786,1.18e-12,13;UBERON:0000485,1.68e-09,11;UBERON:0005177,4.65e-09,79;UBERON:0003350,5.87e-09,9;UBERON:0004808,5.87e-09,9;UBERON:0001277,5.87e-09,9;UBERON:0004923,6.95e-08,24;UBERON:0002100,5.34e-07,90|phase1_expression=1.60148847104794,10.4692622291808,10.4649825059593,9.37639055051173,11.520601788766,5.87577451691614,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,7.35965144849671,7.79991555628378,13.2073351746455,8.61523992318149,5.817723282519,11.0213583284697,15.6258680451157,8.86922042621219,0,0,0,6.64358725427932,5.15327400611326,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.766124028511126,0,0.791317726381163,0.274462930807229,0,0.558365998002762,1.12552522006336,0.45839474333043,0,0.427115042397309,0,0,0,1.15945795480671,1.72084775396277,4.0798280022465,3.2382191498269,1.29955283489534,3.58421509677868,1.12355536105401,0,0,0,2.95771181531029,0,0,0,1.94841936910093,2.02687892380079,4.54972000513305,2.05530983494308,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.60289056221049,0.705532242814229,0.628332956648377,4.94389935468748,0,0,0,0,0,1.86391761218122,3.22058876712702,4.81727425670947,7.15279754584056,0,0,0,0.149790639404823,0,0.753926112677186,0.347648640384553,0.511430914660661,0.62336413367868,0.811206315338788,0.712875546952214,0.373220911830279,3.53811861807145,3.78795340595653,0.130120442962704,0,0,0.60281927134286,0.272145996605311,0.512454881139399,0.281105173679186,1.29351685369508,0,0,0.527853372491847,0.219195732427575,1.94633074457919,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.583826711835847,0,0.32833492815819,0.162137619091711,0.292399974850665,0,0,0.841159794256509,0.514523061896422,6.93879444265976,5.28901133327089,0.426576501070468,1.39342003116263,1.28867461322093,3.83198696784351,4.66993892074228,3.23383564391351,9.49058123089023,7.24675400785648,6.53471542880701,5.57078121715222,4.67913809085888,5.39291645192533,5.61958929674205,9.16049856970089,0.569003702859245,0.685491075658373,0,1.62921062276251,1.16371492300575,2.24434623649019,2.52946148497029,2.21415221969403,4.08196692387575,2.59134044235781,2.07516838961004,0.500535317148282,0.196558995113203,0.674586337154561,0,0.964708639009667,0.25462585178142,0.575392274901621,1.62135226775035,0.823684239564244,2.87536413054709,3.72140947668503,2.18426371180192,2.77836765741823,2.51156378930677,2.8946611281802,2.95605104266567,0.568474235311454,1.79261474086228,0.848725428875941,1.17345124144251,1.67506257441816,1.6663054862021,5.46374214001837,2.04925687338048,2.87904096543407,2.39182152986231,3.11340297959902,1.89953480052485,4.33947175744535,0,0,3.44234991113325,1.93155722413313,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,1.48473110675282,2.65490276679926,1.94224508923985,1.81394134178851,2.64047111658257,2.36241514304618,2.45948118355142,3.10113951801865,1.45413491791002,2.13898427030833,4.42451461110142,2.10837217149998,4.12542172992747,1.02131881726136,1.08036656418786,0.905510786479282,1.07168517515796,1.95074257006501,1.6053193584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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18260 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q61146 | |||
|association_with_transcript=0bp_to_ENSMUST00000022140_5end | |||
|cluster_id=chr13:101322659..101322676,- | |||
|description=CAGE_peak_3_at_Ocln_5end | |||
|id=chr13:101322659..101322676,- | |||
|ontology_enrichment_celltype=CL:0000066!1.24e-08!25;CL:0002563!5.31e-07!9;CL:0002251!5.31e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.15e-12,25;CL:0000223,3.36e-09,20;CL:0002563,5.87e-09,9;CL:0002251,5.87e-09,9;CL:0000075,2.99e-07,7;CL:0002076,3.41e-07,15;CL:0000239,9.06e-07,6;CL:0000677,9.06e-07,6;CL:0000584,9.06e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.02e-21!43;UBERON:0005409!2.91e-18!59;UBERON:0001007!2.85e-17!128;UBERON:0001555!2.85e-17!128;UBERON:0007026!2.85e-17!128;UBERON:0004119!4.90e-17!130;UBERON:0000925!4.90e-17!130;UBERON:0006595!4.90e-17!130;UBERON:0004921!4.28e-16!126;UBERON:0004185!4.28e-16!126;UBERON:0000344!4.81e-11!15;UBERON:0000481!3.71e-10!230;UBERON:0001242!9.93e-10!13;UBERON:0000060!9.93e-10!13;UBERON:0001262!9.93e-10!13;UBERON:0004786!9.93e-10!13;UBERON:0000466!2.30e-09!79;UBERON:0005177!9.18e-09!85;UBERON:0002108!1.16e-07!16;UBERON:0000485!2.11e-07!11;UBERON:0003350!5.31e-07!9;UBERON:0004808!5.31e-07!9;UBERON:0001277!5.31e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.88e-23,31;UBERON:0005409,7.14e-19,47;UBERON:0001007,8.31e-18,116;UBERON:0001555,8.31e-18,116;UBERON:0007026,8.31e-18,116;UBERON:0004119,4.29e-17,118;UBERON:0000925,4.29e-17,118;UBERON:0006595,4.29e-17,118;UBERON:0004921,2.21e-16,114;UBERON:0000344,1.93e-14,15;UBERON:0001242,1.18e-12,13;UBERON:0001262,1.18e-12,13;UBERON:0004786,1.18e-12,13;UBERON:0000485,1.68e-09,11;UBERON:0005177,4.65e-09,79;UBERON:0003350,5.87e-09,9;UBERON:0004808,5.87e-09,9;UBERON:0001277,5.87e-09,9;UBERON:0004923,6.95e-08,24;UBERON:0002100,5.34e-07,90 | |||
|phase1_expression=1.60148847104794,10.4692622291808,10.4649825059593,9.37639055051173,11.520601788766,5.87577451691614,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,7.35965144849671,7.79991555628378,13.2073351746455,8.61523992318149,5.817723282519,11.0213583284697,15.6258680451157,8.86922042621219,0,0,0,6.64358725427932,5.15327400611326,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.766124028511126,0,0.791317726381163,0.274462930807229,0,0.558365998002762,1.12552522006336,0.45839474333043,0,0.427115042397309,0,0,0,1.15945795480671,1.72084775396277,4.0798280022465,3.2382191498269,1.29955283489534,3.58421509677868,1.12355536105401,0,0,0,2.95771181531029,0,0,0,1.94841936910093,2.02687892380079,4.54972000513305,2.05530983494308,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.60289056221049,0.705532242814229,0.628332956648377,4.94389935468748,0,0,0,0,0,1.86391761218122,3.22058876712702,4.81727425670947,7.15279754584056,0,0,0,0.149790639404823,0,0.753926112677186,0.347648640384553,0.511430914660661,0.62336413367868,0.811206315338788,0.712875546952214,0.373220911830279,3.53811861807145,3.78795340595653,0.130120442962704,0,0,0.60281927134286,0.272145996605311,0.512454881139399,0.281105173679186,1.29351685369508,0,0,0.527853372491847,0.219195732427575,1.94633074457919,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.583826711835847,0,0.32833492815819,0.162137619091711,0.292399974850665,0,0,0.841159794256509,0.514523061896422,6.93879444265976,5.28901133327089,0.426576501070468,1.39342003116263,1.28867461322093,3.83198696784351,4.66993892074228,3.23383564391351,9.49058123089023,7.24675400785648,6.53471542880701,5.57078121715222,4.67913809085888,5.39291645192533,5.61958929674205,9.16049856970089,0.569003702859245,0.685491075658373,0,1.62921062276251,1.16371492300575,2.24434623649019,2.52946148497029,2.21415221969403,4.08196692387575,2.59134044235781,2.07516838961004,0.500535317148282,0.196558995113203,0.674586337154561,0,0.964708639009667,0.25462585178142,0.575392274901621,1.62135226775035,0.823684239564244,2.87536413054709,3.72140947668503,2.18426371180192,2.77836765741823,2.51156378930677,2.8946611281802,2.95605104266567,0.568474235311454,1.79261474086228,0.848725428875941,1.17345124144251,1.67506257441816,1.6663054862021,5.46374214001837,2.04925687338048,2.87904096543407,2.39182152986231,3.11340297959902,1.89953480052485,4.33947175744535,0,0,3.44234991113325,1.93155722413313,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,1.48473110675282,2.65490276679926,1.94224508923985,1.81394134178851,2.64047111658257,2.36241514304618,2.45948118355142,3.10113951801865,1.45413491791002,2.13898427030833,4.42451461110142,2.10837217149998,4.12542172992747,1.02131881726136,1.08036656418786,0.905510786479282,1.07168517515796,1.95074257006501,1.60531935841864,2.13913726782757,2.43571959291679,0.23467170806371,0.42366414172764,6.3953235435939,1.6488625294148,0.807322133479528,1.80938774784468,2.14870219205646,2.46211349617592,5.82961673259701,0.556275906031529,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0.954670618015114,0.632671987162271,1.01659733563424,1.62008011232702,1.88179466413022,2.40198820120795,2.56242258131159,2.0663363931334,2.87931536182433,4.53652406521275,4.97071450469541,0,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,1.68956125490778,1.5256441023948,1.0416350787516,1.67774951081137,1.20792060413003,0.576060012515731,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0.179427713218951,0,0.965947970160952,0.375364950902364,0.915758121336325,0.857473516316263,7.02200945649509,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.682934423016537,0.243106717068294,0,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.37456602987953,0.448176066834085,0.746661096422973,0,0.695305955669133,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0,0.470546902076653,0.676916863133412,1.28049581010941,0.526139422875686,0.950628796921032,0,0.830445126869219,0.788035859004508,0,0.309873682371932,0.578719832943424,0.249810577937946,0.935726433781634,1.28922632428979,0,0.220591419119515,0 | |||
|short_description=p3@Ocln | |||
}} |
Latest revision as of 01:07, 27 September 2015
Short description: | p3@Ocln |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ocln_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000022140_5end |
EntrezGene: | Ocln |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.15e-12 | 25 |
endodermal cell | 3.36e-09 | 20 |
intestinal epithelial cell | 5.87e-09 | 9 |
epithelial cell of alimentary canal | 5.87e-09 | 9 |
columnar/cuboidal epithelial cell | 2.99e-07 | 7 |
endo-epithelial cell | 3.41e-07 | 15 |
brush border epithelial cell | 9.06e-07 | 6 |
gut absorptive cell | 9.06e-07 | 6 |
enterocyte | 9.06e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.88e-23 | 31 |
gastrointestinal system | 7.14e-19 | 47 |
digestive system | 8.31e-18 | 116 |
digestive tract | 8.31e-18 | 116 |
primitive gut | 8.31e-18 | 116 |
endoderm-derived structure | 4.29e-17 | 118 |
endoderm | 4.29e-17 | 118 |
presumptive endoderm | 4.29e-17 | 118 |
subdivision of digestive tract | 2.21e-16 | 114 |
mucosa | 1.93e-14 | 15 |
intestinal mucosa | 1.18e-12 | 13 |
wall of intestine | 1.18e-12 | 13 |
gastrointestinal system mucosa | 1.18e-12 | 13 |
simple columnar epithelium | 1.68e-09 | 11 |
trunk region element | 4.65e-09 | 79 |
epithelium of mucosa | 5.87e-09 | 9 |
gastrointestinal system epithelium | 5.87e-09 | 9 |
intestinal epithelium | 5.87e-09 | 9 |
organ component layer | 6.95e-08 | 24 |
trunk | 5.34e-07 | 90 |