FFCP PHASE1:Hg19::chr3:187930643..187930689,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |||
|TSSclassifier=strong | |||
|UniProt=Q93052 | |||
|association_with_transcript=-31bp_to_ENST00000312675,NM_005578,uc003frs.1_5end | |||
|cluster_id=chr3:187930643..187930689,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_10_at_LPP_5end | |||
|id=chr3:187930643..187930689,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.33e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.80e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.67e-13;65!UBERON:0007297;3.85e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.34e-07;3!DOID:127;9.34e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.52e-07,3;DOID:127,6.52e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-15!115;UBERON:0000481!2.77e-07!347;UBERON:0000468!4.33e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;1.98e-16;21!UBERON:0006947;1.01e-14;3!UBERON:0004054;1.01e-14;3!UBERON:0005904;3.65e-11;4!UBERON:0001310;1.33e-10;4!UBERON:0003135;1.55e-10;11!UBERON:0003133;1.63e-10;44!UBERON:0005409;3.67e-09;22!UBERON:0000160;6.97e-09;17!UBERON:0003975;9.22e-09;18!UBERON:0001155;1.21e-08;9!UBERON:0005156;3.31e-07;59!UBERON:0000990;3.31e-07;59!UBERON:0003101;3.55e-07;22!UBERON:0000079;3.55e-07;22!UBERON:0004921;4.01e-07;33!UBERON:0000059;4.46e-07;11!UBERON:0003134;8.27e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.43e-20,114;UBERON:0006947,1.16e-14,3;UBERON:0004054,1.16e-14,3;UBERON:0003133,1.09e-13,48;UBERON:0004175,1.21e-13,25;UBERON:0005156,1.70e-12,59;UBERON:0000990,1.70e-12,59;UBERON:0005904,4.05e-11,4;UBERON:0003135,1.56e-10,11;UBERON:0001310,1.80e-10,4;UBERON:0005409,3.07e-10,25;UBERON:0000160,6.88e-09,17;UBERON:0001155,1.20e-08,9;UBERON:0003064,2.29e-07,28;UBERON:0003101,3.59e-07,22;UBERON:0000079,3.59e-07,22;UBERON:0003975,3.85e-07,22;UBERON:0000059,4.43e-07,11;UBERON:0003134,7.21e-07,37;UBERON:0000474,7.21e-07,37;UBERON:0004876,7.49e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,1.63723844372141,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0,0,0,0.538168907066586,0,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.292311015483596,0.757301322732344,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0.37064843820784,0.572499546967965,0,0.949138274156178,1.33441135746677,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02910376962704,1.239293992399,0.281695602532241,0,0,1.07001315444375,2.83808851256478,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.23874448473769,0,0,0,0,0,0,0,10.7593913655578,4.14425873296722,0,1.53403023753232,0,0,0,0,0,27.8174403896153,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.87754158861589,0,0,4.84786628573922,0,0,0,0,0,0.732780747214898,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,4.97630965539252,7.34197785377715,2.4441205797345,0,0,0,0,0,0,0,0,0,8.68085686268659,0,0,1.64285107034069,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0,0,19.0098472317302,0,0,0,0,0,0,0,4.69596588426576,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,4.12488763221031,0,0,0,0,0.335917362433631,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0,0.86686278029118,0.104909176269996,0,0,0,0.714695326373367,0,0,1.62899880526114,1.72844298240254,0.653174720218818,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.342173675768659,0,0.961086713109252,0.78602152549833,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,1.06336685823198,0,0,0.761610424337591,0,0.181848659202559,0,0,2.3885753321917,0,0,0.673498977531838,1.26184898228651,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08362346231955,0,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,7.44316767583941,0,0,0,0,0,0,0.620916591138472,0,0.342976018874837,0.271878931907327,0,0.472775363535873,0,5.41602340668547,0,0,0.913158720509496,0.863710364874486,0.47775168788705,0.357382720883282,0,0,0,0,0,0,0,0,0,0,4.65725755210022,0,0,0,0,0,0,1.29485767437579,0.718639647993729,0,0,0,0,0,0,0,0,3.00979216620984,0.655678681511872,0,34.5659133673007,0,0,0,0,0.169927114687817,1.03382309777839,0.0644578879735772,0,0,0,0,4.3820183294791,0,0.143339583151451,0,0.0679914901909147,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,2.72803313585662,0,0,0,0,0.476128862927481,0,0,0.33639558774184,0.318235791390825,0,0.217716747896961,0,0.0673520530145875,1.64961072403156,0.332660356546013,0,0,0,0,9.38563769613817,14.0577660810296,0.813792356631477,5.99181096766961,0.805095174364105,0 | |||
|short_description=p10@LPP | |||
}} |
Latest revision as of 07:38, 17 September 2015
Short description: | p10@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LPP_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -31bp_to_ENST00000312675, NM_005578, uc003frs.1_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | Q93052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.80e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.43e-20 | 114 |
male genital duct | 1.16e-14 | 3 |
internal male genitalia | 1.16e-14 | 3 |
reproductive organ | 1.09e-13 | 48 |
internal genitalia | 1.21e-13 | 25 |
reproductive structure | 1.70e-12 | 59 |
reproductive system | 1.70e-12 | 59 |
duct of male reproductive system | 4.05e-11 | 4 |
male reproductive organ | 1.56e-10 | 11 |
umbilical artery | 1.80e-10 | 4 |
gastrointestinal system | 3.07e-10 | 25 |
intestine | 6.88e-09 | 17 |
colon | 1.20e-08 | 9 |
intermediate mesoderm | 2.29e-07 | 28 |
male organism | 3.59e-07 | 22 |
male reproductive system | 3.59e-07 | 22 |
internal female genitalia | 3.85e-07 | 22 |
large intestine | 4.43e-07 | 11 |
female reproductive organ | 7.21e-07 | 37 |
female reproductive system | 7.21e-07 | 37 |
urogenital ridge | 7.49e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.52e-07 | 3 |
leiomyoma | 6.52e-07 | 3 |