FFCP PHASE1:Mm9::chr12:71008887..71008897,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:71008887..71008897,+|id=chr12:71008887..71008897,+|ontology_enrichment_celltype=CL:0000117!1.03e-17!23;CL:0000337!1.03e-17!23;CL:0000540!2.10e-12!33;CL:0000047!2.10e-12!33;CL:0000031!2.10e-12!33;CL:0000404!2.10e-12!33;CL:0000393!8.11e-10!39;CL:0000211!8.11e-10!39;CL:0002319!2.01e-07!43;CL:0000221!4.56e-07!44;CL:0000133!4.56e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-16,23;CL:0000337,1.76e-16,23;CL:0000540,1.70e-10,33;CL:0000047,1.70e-10,33;CL:0000031,1.70e-10,33;CL:0000404,1.70e-10,33;CL:0000393,2.14e-08,39;CL:0000211,2.14e-08,39;CL:0002610,3.13e-08,3;CL:0002614,6.96e-08,3;CL:0002319,2.49e-07,43;CL:0002613,3.96e-07,3;CL:0000221,4.28e-07,44;CL:0000133,4.28e-07,44;CL:0002612,6.79e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.16e-33!71;UBERON:0003075!5.16e-33!71;UBERON:0007284!5.16e-33!71;UBERON:0001049!9.73e-29!52;UBERON:0005068!9.73e-29!52;UBERON:0006241!9.73e-29!52;UBERON:0007135!9.73e-29!52;UBERON:0000955!2.95e-27!50;UBERON:0006238!2.95e-27!50;UBERON:0001017!5.71e-27!73;UBERON:0005743!5.71e-27!73;UBERON:0002616!1.23e-26!49;UBERON:0000033!1.52e-26!63;UBERON:0004121!1.14e-25!102;UBERON:0000924!1.14e-25!102;UBERON:0006601!1.14e-25!102;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0003056!7.14e-24!49;UBERON:0002020!3.10e-22!34;UBERON:0003080!1.37e-21!40;UBERON:0002780!1.30e-20!39;UBERON:0001890!1.30e-20!39;UBERON:0006240!1.30e-20!39;UBERON:0002791!2.18e-18!29;UBERON:0003528!2.18e-18!29;UBERON:0001893!2.18e-18!29;UBERON:0007811!2.85e-14!86;UBERON:0000956!3.13e-12!21;UBERON:0001869!3.13e-12!21;UBERON:0000203!3.13e-12!21;UBERON:0000153!1.51e-11!94;UBERON:0002619!3.82e-10!17;UBERON:0002021!6.95e-09!10;UBERON:0000411!6.95e-09!10;UBERON:0001950!6.95e-09!10;UBERON:0003076!1.46e-07!12;UBERON:0003057!1.46e-07!12;UBERON:0002420!1.73e-07!8;UBERON:0007245!1.73e-07!8;UBERON:0010009!1.73e-07!8;UBERON:0010011!1.73e-07!8;UBERON:0000454!1.73e-07!8;UBERON:0002298!4.06e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-39,54;UBERON:0001049,2.17e-35,52;UBERON:0005068,2.17e-35,52;UBERON:0006241,2.17e-35,52;UBERON:0007135,2.17e-35,52;UBERON:0001017,1.93e-31,73;UBERON:0001016,2.14e-30,75;UBERON:0002020,1.78e-28,34;UBERON:0002616,1.27e-27,46;UBERON:0002346,2.07e-27,64;UBERON:0003075,2.07e-27,64;UBERON:0007284,2.07e-27,64;UBERON:0000955,6.68e-27,47;UBERON:0006238,6.68e-27,47;UBERON:0010371,3.81e-23,73;UBERON:0003528,9.62e-23,29;UBERON:0002791,9.62e-23,29;UBERON:0001893,9.62e-23,29;UBERON:0004121,2.25e-22,95;UBERON:0000924,2.25e-22,95;UBERON:0006601,2.25e-22,95;UBERON:0003080,8.90e-22,40;UBERON:0002780,5.11e-20,39;UBERON:0001890,5.11e-20,39;UBERON:0006240,5.11e-20,39;UBERON:0010314,6.98e-17,92;UBERON:0003056,8.51e-17,49;UBERON:0002021,9.34e-16,10;UBERON:0000411,9.34e-16,10;UBERON:0001950,9.34e-16,10;UBERON:0003076,1.43e-14,12;UBERON:0003057,1.43e-14,12;UBERON:0002619,5.37e-13,17;UBERON:0002420,6.79e-13,8;UBERON:0007245,6.79e-13,8;UBERON:0010009,6.79e-13,8;UBERON:0010011,6.79e-13,8;UBERON:0000454,6.79e-13,8;UBERON:0000025,3.04e-12,114;UBERON:0000956,3.12e-12,21;UBERON:0001869,3.12e-12,21;UBERON:0000203,3.12e-12,21;UBERON:0004111,5.66e-11,122;UBERON:0002950,3.44e-10,4;UBERON:0001891,3.44e-10,4;UBERON:0009616,3.44e-10,4;UBERON:0010286,3.44e-10,4;UBERON:0002240,4.37e-09,6;UBERON:0005174,4.37e-09,6;UBERON:0001137,4.37e-09,6;UBERON:0004684,3.13e-08,3;UBERON:0002275,3.13e-08,3;UBERON:0002038,6.96e-08,3;UBERON:0009663,6.96e-08,3;UBERON:0009661,6.96e-08,3;UBERON:0000125,6.96e-08,3;UBERON:0002308,6.96e-08,3;UBERON:0004733,4.50e-07,6;UBERON:0004732,4.50e-07,6;UBERON:0002028,4.50e-07,6;UBERON:0007277,4.50e-07,6;UBERON:0001948,5.66e-07,5;UBERON:0002315,5.66e-07,5;UBERON:0011216,5.72e-07,194;UBERON:0000369,6.58e-07,5;UBERON:0002435,6.58e-07,5;UBERON:0000204,6.58e-07,5;UBERON:0010082,6.58e-07,5;UBERON:0002257,6.79e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.420649922702764,1.71390590642282,0.883474163806454,0.979926393719632,0.958454710182364,0.919218786610021,4.40463523997555,3.44755812830007,4.30098293117482,1.31886287730194,1.82975287204819,2.08365348222704,2.79182999001381,3.37657566019008,2.90316670775939,1.76777151284201,1.70846016958924,1.3047961207771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.323533699894818,0,0,0,7.61230072230023,2.51336048176146,0,0,0,0,5.09288173976397,0.457500602818626,1.00523481690292,2.43354048269187,4.34716277461562,3.74018480207208,2.75810147215188,0,0,0,0,0.260240885925407,0,0.900310649026746,0.90422890701429,0.544291993210623,0.896796041993948,0.843315521037559,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.74937841044784,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,6.21221938938677,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,1.06949213515416,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.428674070063185,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0.165306911450672,0,0,0,2.81846469342095,0,0,0,0,0,0,0,0,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,1.54667864109319,1.37016503954128,3.7769694869485,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.415149390336707,1.19707462020309,1.02440163452481,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.448176066834085,0.459483751644906,0,0.115884325944855,0.77163688185482,0,0.441596760403192,0.685738504770831,0,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0,0.999242311751784,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421|short_description=p@chr12:71008887..71008897,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:71008887..71008897,+ | |||
|description=CAGE_peak_at_chr12:71008887..71008897,+ | |||
|id=chr12:71008887..71008897,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.03e-17!23;CL:0000337!1.03e-17!23;CL:0000540!2.10e-12!33;CL:0000047!2.10e-12!33;CL:0000031!2.10e-12!33;CL:0000404!2.10e-12!33;CL:0000393!8.11e-10!39;CL:0000211!8.11e-10!39;CL:0002319!2.01e-07!43;CL:0000221!4.56e-07!44;CL:0000133!4.56e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-16,23;CL:0000337,1.76e-16,23;CL:0000540,1.70e-10,33;CL:0000047,1.70e-10,33;CL:0000031,1.70e-10,33;CL:0000404,1.70e-10,33;CL:0000393,2.14e-08,39;CL:0000211,2.14e-08,39;CL:0002610,3.13e-08,3;CL:0002614,6.96e-08,3;CL:0002319,2.49e-07,43;CL:0002613,3.96e-07,3;CL:0000221,4.28e-07,44;CL:0000133,4.28e-07,44;CL:0002612,6.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.16e-33!71;UBERON:0003075!5.16e-33!71;UBERON:0007284!5.16e-33!71;UBERON:0001049!9.73e-29!52;UBERON:0005068!9.73e-29!52;UBERON:0006241!9.73e-29!52;UBERON:0007135!9.73e-29!52;UBERON:0000955!2.95e-27!50;UBERON:0006238!2.95e-27!50;UBERON:0001017!5.71e-27!73;UBERON:0005743!5.71e-27!73;UBERON:0002616!1.23e-26!49;UBERON:0000033!1.52e-26!63;UBERON:0004121!1.14e-25!102;UBERON:0000924!1.14e-25!102;UBERON:0006601!1.14e-25!102;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0003056!7.14e-24!49;UBERON:0002020!3.10e-22!34;UBERON:0003080!1.37e-21!40;UBERON:0002780!1.30e-20!39;UBERON:0001890!1.30e-20!39;UBERON:0006240!1.30e-20!39;UBERON:0002791!2.18e-18!29;UBERON:0003528!2.18e-18!29;UBERON:0001893!2.18e-18!29;UBERON:0007811!2.85e-14!86;UBERON:0000956!3.13e-12!21;UBERON:0001869!3.13e-12!21;UBERON:0000203!3.13e-12!21;UBERON:0000153!1.51e-11!94;UBERON:0002619!3.82e-10!17;UBERON:0002021!6.95e-09!10;UBERON:0000411!6.95e-09!10;UBERON:0001950!6.95e-09!10;UBERON:0003076!1.46e-07!12;UBERON:0003057!1.46e-07!12;UBERON:0002420!1.73e-07!8;UBERON:0007245!1.73e-07!8;UBERON:0010009!1.73e-07!8;UBERON:0010011!1.73e-07!8;UBERON:0000454!1.73e-07!8;UBERON:0002298!4.06e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-39,54;UBERON:0001049,2.17e-35,52;UBERON:0005068,2.17e-35,52;UBERON:0006241,2.17e-35,52;UBERON:0007135,2.17e-35,52;UBERON:0001017,1.93e-31,73;UBERON:0001016,2.14e-30,75;UBERON:0002020,1.78e-28,34;UBERON:0002616,1.27e-27,46;UBERON:0002346,2.07e-27,64;UBERON:0003075,2.07e-27,64;UBERON:0007284,2.07e-27,64;UBERON:0000955,6.68e-27,47;UBERON:0006238,6.68e-27,47;UBERON:0010371,3.81e-23,73;UBERON:0003528,9.62e-23,29;UBERON:0002791,9.62e-23,29;UBERON:0001893,9.62e-23,29;UBERON:0004121,2.25e-22,95;UBERON:0000924,2.25e-22,95;UBERON:0006601,2.25e-22,95;UBERON:0003080,8.90e-22,40;UBERON:0002780,5.11e-20,39;UBERON:0001890,5.11e-20,39;UBERON:0006240,5.11e-20,39;UBERON:0010314,6.98e-17,92;UBERON:0003056,8.51e-17,49;UBERON:0002021,9.34e-16,10;UBERON:0000411,9.34e-16,10;UBERON:0001950,9.34e-16,10;UBERON:0003076,1.43e-14,12;UBERON:0003057,1.43e-14,12;UBERON:0002619,5.37e-13,17;UBERON:0002420,6.79e-13,8;UBERON:0007245,6.79e-13,8;UBERON:0010009,6.79e-13,8;UBERON:0010011,6.79e-13,8;UBERON:0000454,6.79e-13,8;UBERON:0000025,3.04e-12,114;UBERON:0000956,3.12e-12,21;UBERON:0001869,3.12e-12,21;UBERON:0000203,3.12e-12,21;UBERON:0004111,5.66e-11,122;UBERON:0002950,3.44e-10,4;UBERON:0001891,3.44e-10,4;UBERON:0009616,3.44e-10,4;UBERON:0010286,3.44e-10,4;UBERON:0002240,4.37e-09,6;UBERON:0005174,4.37e-09,6;UBERON:0001137,4.37e-09,6;UBERON:0004684,3.13e-08,3;UBERON:0002275,3.13e-08,3;UBERON:0002038,6.96e-08,3;UBERON:0009663,6.96e-08,3;UBERON:0009661,6.96e-08,3;UBERON:0000125,6.96e-08,3;UBERON:0002308,6.96e-08,3;UBERON:0004733,4.50e-07,6;UBERON:0004732,4.50e-07,6;UBERON:0002028,4.50e-07,6;UBERON:0007277,4.50e-07,6;UBERON:0001948,5.66e-07,5;UBERON:0002315,5.66e-07,5;UBERON:0011216,5.72e-07,194;UBERON:0000369,6.58e-07,5;UBERON:0002435,6.58e-07,5;UBERON:0000204,6.58e-07,5;UBERON:0010082,6.58e-07,5;UBERON:0002257,6.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.420649922702764,1.71390590642282,0.883474163806454,0.979926393719632,0.958454710182364,0.919218786610021,4.40463523997555,3.44755812830007,4.30098293117482,1.31886287730194,1.82975287204819,2.08365348222704,2.79182999001381,3.37657566019008,2.90316670775939,1.76777151284201,1.70846016958924,1.3047961207771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.323533699894818,0,0,0,7.61230072230023,2.51336048176146,0,0,0,0,5.09288173976397,0.457500602818626,1.00523481690292,2.43354048269187,4.34716277461562,3.74018480207208,2.75810147215188,0,0,0,0,0.260240885925407,0,0.900310649026746,0.90422890701429,0.544291993210623,0.896796041993948,0.843315521037559,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.74937841044784,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,6.21221938938677,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,1.06949213515416,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.428674070063185,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0.165306911450672,0,0,0,2.81846469342095,0,0,0,0,0,0,0,0,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,1.54667864109319,1.37016503954128,3.7769694869485,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.415149390336707,1.19707462020309,1.02440163452481,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.448176066834085,0.459483751644906,0,0.115884325944855,0.77163688185482,0,0.441596760403192,0.685738504770831,0,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0,0.999242311751784,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:71008887..71008897,+ | |||
}} |
Latest revision as of 04:28, 5 August 2015
Short description: | p@chr12:71008887..71008897, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:71008887..71008897, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-16 | 23 |
neuron | 1.70e-10 | 33 |
neuronal stem cell | 1.70e-10 | 33 |
neuroblast | 1.70e-10 | 33 |
electrically signaling cell | 1.70e-10 | 33 |
electrically responsive cell | 2.14e-08 | 39 |
electrically active cell | 2.14e-08 | 39 |
raphe nuclei neuron | 3.13e-08 | 3 |
neuron of the substantia nigra | 6.96e-08 | 3 |
neural cell | 2.49e-07 | 43 |
striatum neuron | 3.96e-07 | 3 |
ectodermal cell | 4.28e-07 | 44 |
neurectodermal cell | 4.28e-07 | 44 |
neuron of the ventral spinal cord | 6.79e-07 | 3 |