FFCP PHASE1:Mm9::chr12:71008734..71008741,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:71008734..71008741,+|id=chr12:71008734..71008741,+|ontology_enrichment_celltype=CL:0000117!4.01e-20!23;CL:0000337!4.01e-20!23;CL:0000540!6.57e-17!33;CL:0000047!6.57e-17!33;CL:0000031!6.57e-17!33;CL:0000404!6.57e-17!33;CL:0000393!8.91e-13!39;CL:0000211!8.91e-13!39;CL:0002319!1.92e-11!43;CL:0000221!5.75e-11!44;CL:0000133!5.75e-11!44;CL:0000055!1.51e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.66e-28,23;CL:0000337,8.66e-28,23;CL:0000540,6.27e-18,33;CL:0000047,6.27e-18,33;CL:0000031,6.27e-18,33;CL:0000404,6.27e-18,33;CL:0000393,1.87e-14,39;CL:0000211,1.87e-14,39;CL:0002319,1.11e-12,43;CL:0000221,2.73e-12,44;CL:0000133,2.73e-12,44;CL:0002610,2.72e-07,3;CL:0002612,5.33e-07,3;CL:0002613,7.08e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.62e-32!73;UBERON:0005743!3.62e-32!73;UBERON:0000073!8.90e-32!75;UBERON:0001016!8.90e-32!75;UBERON:0001049!1.62e-30!52;UBERON:0005068!1.62e-30!52;UBERON:0006241!1.62e-30!52;UBERON:0007135!1.62e-30!52;UBERON:0002346!3.35e-30!71;UBERON:0003075!3.35e-30!71;UBERON:0007284!3.35e-30!71;UBERON:0000033!4.72e-29!63;UBERON:0000955!1.01e-28!50;UBERON:0006238!1.01e-28!50;UBERON:0002616!6.95e-28!49;UBERON:0002020!4.58e-27!34;UBERON:0004121!1.49e-26!102;UBERON:0000924!1.49e-26!102;UBERON:0006601!1.49e-26!102;UBERON:0003056!4.15e-25!49;UBERON:0003080!6.21e-23!40;UBERON:0002791!1.98e-22!29;UBERON:0003528!1.98e-22!29;UBERON:0001893!1.98e-22!29;UBERON:0002780!6.08e-22!39;UBERON:0001890!6.08e-22!39;UBERON:0006240!6.08e-22!39;UBERON:0007811!1.87e-16!86;UBERON:0000956!2.03e-15!21;UBERON:0001869!2.03e-15!21;UBERON:0000203!2.03e-15!21;UBERON:0000153!1.30e-13!94;UBERON:0002619!1.15e-12!17;UBERON:0002021!4.28e-11!10;UBERON:0000411!4.28e-11!10;UBERON:0001950!4.28e-11!10;UBERON:0002420!3.46e-08!8;UBERON:0007245!3.46e-08!8;UBERON:0010009!3.46e-08!8;UBERON:0010011!3.46e-08!8;UBERON:0000454!3.46e-08!8;UBERON:0003076!6.44e-08!12;UBERON:0003057!6.44e-08!12;UBERON:0000025!2.48e-07!114;UBERON:0002298!9.87e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.70e-50,54;UBERON:0001017,6.13e-46,73;UBERON:0001049,7.04e-46,52;UBERON:0005068,7.04e-46,52;UBERON:0006241,7.04e-46,52;UBERON:0007135,7.04e-46,52;UBERON:0001016,1.75e-44,75;UBERON:0002020,2.90e-43,34;UBERON:0000955,7.79e-37,47;UBERON:0006238,7.79e-37,47;UBERON:0002346,9.89e-36,64;UBERON:0003075,9.89e-36,64;UBERON:0007284,9.89e-36,64;UBERON:0002616,2.74e-35,46;UBERON:0003528,4.60e-34,29;UBERON:0002791,4.60e-34,29;UBERON:0001893,4.60e-34,29;UBERON:0004121,2.79e-33,95;UBERON:0000924,2.79e-33,95;UBERON:0006601,2.79e-33,95;UBERON:0010371,2.63e-30,73;UBERON:0003080,3.55e-30,40;UBERON:0002780,2.25e-28,39;UBERON:0001890,2.25e-28,39;UBERON:0006240,2.25e-28,39;UBERON:0002619,1.25e-25,17;UBERON:0003056,2.00e-23,49;UBERON:0000956,6.34e-23,21;UBERON:0001869,6.34e-23,21;UBERON:0000203,6.34e-23,21;UBERON:0010314,2.47e-22,92;UBERON:0002021,3.43e-21,10;UBERON:0000411,3.43e-21,10;UBERON:0001950,3.43e-21,10;UBERON:0000025,2.03e-16,114;UBERON:0003076,1.00e-15,12;UBERON:0003057,1.00e-15,12;UBERON:0004111,8.51e-15,122;UBERON:0002420,4.35e-12,8;UBERON:0007245,4.35e-12,8;UBERON:0010009,4.35e-12,8;UBERON:0010011,4.35e-12,8;UBERON:0000454,4.35e-12,8;UBERON:0002240,5.58e-12,6;UBERON:0005174,5.58e-12,6;UBERON:0001137,5.58e-12,6;UBERON:0011216,9.94e-12,194;UBERON:0000369,1.35e-10,5;UBERON:0002435,1.35e-10,5;UBERON:0000204,1.35e-10,5;UBERON:0010082,1.35e-10,5;UBERON:0001948,2.72e-10,5;UBERON:0002315,2.72e-10,5;UBERON:0000483,6.76e-08,174;UBERON:0000119,1.03e-07,176;UBERON:0004684,2.72e-07,3;UBERON:0002275,2.72e-07,3;UBERON:0002257,5.33e-07,3;UBERON:0001954,6.93e-07,7;UBERON:0003022,6.93e-07,7;UBERON:0002421,6.93e-07,7;UBERON:0000349,6.93e-07,7;UBERON:0002600,6.93e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.26766280701236,0,0,0,0.988866362566974,0,0,0,0.829516898467821,0.540023753326763,0.841299845405528,1.71390590642282,2.20868540951614,1.10241719293459,1.0543001812006,2.75765635983006,4.40463523997555,1.91531007127782,2.30409799884365,1.71452174049252,2.28719109006024,2.6045668527838,0.837548997004143,2.25105044012672,1.83357897332172,2.06240009831567,2.27794689278565,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,2.04946557908083,1.67557365450764,0,0,0,0,2.69623150928681,3.20250421973039,1.88481528169297,2.08589184230732,2.55715457330331,1.87009240103604,0.973447578406546,0,0,0,0,0,0.459804208866946,0.180062129805349,0.60281927134286,0.476255494059295,0.896796041993948,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.23485534855141,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,3.21101179975584,2.69586879162067,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,1.36175842301515,0,0.258717367565509,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,2.76195141904306,1.71868654031819,1.3748254587495,4.11049511862385,3.7769694869485,2.02506750069542,3.15224842256954,4.07828168085784,3.10656187051092,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.0574354689556133,0.952587382566147,0.579421629724277,0,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.429742108096597,0,0.441182838239031,0|short_description=p@chr12:71008734..71008741,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:71008734..71008741,+ | |||
|description=CAGE_peak_at_chr12:71008734..71008741,+ | |||
|id=chr12:71008734..71008741,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.01e-20!23;CL:0000337!4.01e-20!23;CL:0000540!6.57e-17!33;CL:0000047!6.57e-17!33;CL:0000031!6.57e-17!33;CL:0000404!6.57e-17!33;CL:0000393!8.91e-13!39;CL:0000211!8.91e-13!39;CL:0002319!1.92e-11!43;CL:0000221!5.75e-11!44;CL:0000133!5.75e-11!44;CL:0000055!1.51e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.66e-28,23;CL:0000337,8.66e-28,23;CL:0000540,6.27e-18,33;CL:0000047,6.27e-18,33;CL:0000031,6.27e-18,33;CL:0000404,6.27e-18,33;CL:0000393,1.87e-14,39;CL:0000211,1.87e-14,39;CL:0002319,1.11e-12,43;CL:0000221,2.73e-12,44;CL:0000133,2.73e-12,44;CL:0002610,2.72e-07,3;CL:0002612,5.33e-07,3;CL:0002613,7.08e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.62e-32!73;UBERON:0005743!3.62e-32!73;UBERON:0000073!8.90e-32!75;UBERON:0001016!8.90e-32!75;UBERON:0001049!1.62e-30!52;UBERON:0005068!1.62e-30!52;UBERON:0006241!1.62e-30!52;UBERON:0007135!1.62e-30!52;UBERON:0002346!3.35e-30!71;UBERON:0003075!3.35e-30!71;UBERON:0007284!3.35e-30!71;UBERON:0000033!4.72e-29!63;UBERON:0000955!1.01e-28!50;UBERON:0006238!1.01e-28!50;UBERON:0002616!6.95e-28!49;UBERON:0002020!4.58e-27!34;UBERON:0004121!1.49e-26!102;UBERON:0000924!1.49e-26!102;UBERON:0006601!1.49e-26!102;UBERON:0003056!4.15e-25!49;UBERON:0003080!6.21e-23!40;UBERON:0002791!1.98e-22!29;UBERON:0003528!1.98e-22!29;UBERON:0001893!1.98e-22!29;UBERON:0002780!6.08e-22!39;UBERON:0001890!6.08e-22!39;UBERON:0006240!6.08e-22!39;UBERON:0007811!1.87e-16!86;UBERON:0000956!2.03e-15!21;UBERON:0001869!2.03e-15!21;UBERON:0000203!2.03e-15!21;UBERON:0000153!1.30e-13!94;UBERON:0002619!1.15e-12!17;UBERON:0002021!4.28e-11!10;UBERON:0000411!4.28e-11!10;UBERON:0001950!4.28e-11!10;UBERON:0002420!3.46e-08!8;UBERON:0007245!3.46e-08!8;UBERON:0010009!3.46e-08!8;UBERON:0010011!3.46e-08!8;UBERON:0000454!3.46e-08!8;UBERON:0003076!6.44e-08!12;UBERON:0003057!6.44e-08!12;UBERON:0000025!2.48e-07!114;UBERON:0002298!9.87e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.70e-50,54;UBERON:0001017,6.13e-46,73;UBERON:0001049,7.04e-46,52;UBERON:0005068,7.04e-46,52;UBERON:0006241,7.04e-46,52;UBERON:0007135,7.04e-46,52;UBERON:0001016,1.75e-44,75;UBERON:0002020,2.90e-43,34;UBERON:0000955,7.79e-37,47;UBERON:0006238,7.79e-37,47;UBERON:0002346,9.89e-36,64;UBERON:0003075,9.89e-36,64;UBERON:0007284,9.89e-36,64;UBERON:0002616,2.74e-35,46;UBERON:0003528,4.60e-34,29;UBERON:0002791,4.60e-34,29;UBERON:0001893,4.60e-34,29;UBERON:0004121,2.79e-33,95;UBERON:0000924,2.79e-33,95;UBERON:0006601,2.79e-33,95;UBERON:0010371,2.63e-30,73;UBERON:0003080,3.55e-30,40;UBERON:0002780,2.25e-28,39;UBERON:0001890,2.25e-28,39;UBERON:0006240,2.25e-28,39;UBERON:0002619,1.25e-25,17;UBERON:0003056,2.00e-23,49;UBERON:0000956,6.34e-23,21;UBERON:0001869,6.34e-23,21;UBERON:0000203,6.34e-23,21;UBERON:0010314,2.47e-22,92;UBERON:0002021,3.43e-21,10;UBERON:0000411,3.43e-21,10;UBERON:0001950,3.43e-21,10;UBERON:0000025,2.03e-16,114;UBERON:0003076,1.00e-15,12;UBERON:0003057,1.00e-15,12;UBERON:0004111,8.51e-15,122;UBERON:0002420,4.35e-12,8;UBERON:0007245,4.35e-12,8;UBERON:0010009,4.35e-12,8;UBERON:0010011,4.35e-12,8;UBERON:0000454,4.35e-12,8;UBERON:0002240,5.58e-12,6;UBERON:0005174,5.58e-12,6;UBERON:0001137,5.58e-12,6;UBERON:0011216,9.94e-12,194;UBERON:0000369,1.35e-10,5;UBERON:0002435,1.35e-10,5;UBERON:0000204,1.35e-10,5;UBERON:0010082,1.35e-10,5;UBERON:0001948,2.72e-10,5;UBERON:0002315,2.72e-10,5;UBERON:0000483,6.76e-08,174;UBERON:0000119,1.03e-07,176;UBERON:0004684,2.72e-07,3;UBERON:0002275,2.72e-07,3;UBERON:0002257,5.33e-07,3;UBERON:0001954,6.93e-07,7;UBERON:0003022,6.93e-07,7;UBERON:0002421,6.93e-07,7;UBERON:0000349,6.93e-07,7;UBERON:0002600,6.93e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.26766280701236,0,0,0,0.988866362566974,0,0,0,0.829516898467821,0.540023753326763,0.841299845405528,1.71390590642282,2.20868540951614,1.10241719293459,1.0543001812006,2.75765635983006,4.40463523997555,1.91531007127782,2.30409799884365,1.71452174049252,2.28719109006024,2.6045668527838,0.837548997004143,2.25105044012672,1.83357897332172,2.06240009831567,2.27794689278565,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,2.04946557908083,1.67557365450764,0,0,0,0,2.69623150928681,3.20250421973039,1.88481528169297,2.08589184230732,2.55715457330331,1.87009240103604,0.973447578406546,0,0,0,0,0,0.459804208866946,0.180062129805349,0.60281927134286,0.476255494059295,0.896796041993948,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.23485534855141,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,3.21101179975584,2.69586879162067,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,1.36175842301515,0,0.258717367565509,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,2.76195141904306,1.71868654031819,1.3748254587495,4.11049511862385,3.7769694869485,2.02506750069542,3.15224842256954,4.07828168085784,3.10656187051092,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.0574354689556133,0.952587382566147,0.579421629724277,0,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.429742108096597,0,0.441182838239031,0 | |||
|short_description=p@chr12:71008734..71008741,+ | |||
}} |
Latest revision as of 04:26, 5 August 2015
Short description: | p@chr12:71008734..71008741, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:71008734..71008741, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.66e-28 | 23 |
neuroblast (sensu Vertebrata) | 8.66e-28 | 23 |
neuron | 6.27e-18 | 33 |
neuronal stem cell | 6.27e-18 | 33 |
neuroblast | 6.27e-18 | 33 |
electrically signaling cell | 6.27e-18 | 33 |
electrically responsive cell | 1.87e-14 | 39 |
electrically active cell | 1.87e-14 | 39 |
neural cell | 1.11e-12 | 43 |
ectodermal cell | 2.73e-12 | 44 |
neurectodermal cell | 2.73e-12 | 44 |
raphe nuclei neuron | 2.72e-07 | 3 |
neuron of the ventral spinal cord | 5.33e-07 | 3 |
striatum neuron | 7.08e-07 | 3 |