FFCP PHASE1:Mm9::chr12:112951524..112951531,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112951524..112951531,+|id=chr12:112951524..112951531,+|ontology_enrichment_celltype=CL:0000221!1.97e-16!44;CL:0000133!1.97e-16!44;CL:0002319!3.87e-16!43;CL:0000540!1.20e-15!33;CL:0000047!1.20e-15!33;CL:0000031!1.20e-15!33;CL:0000404!1.20e-15!33;CL:0000393!9.83e-15!39;CL:0000211!9.83e-15!39;CL:0000055!1.31e-14!50;CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0002321!6.33e-08!70;CL:0000220!6.33e-08!70|ontology_enrichment_celltype_v019_2=CL:0000540,8.34e-25,33;CL:0000047,8.34e-25,33;CL:0000031,8.34e-25,33;CL:0000404,8.34e-25,33;CL:0002319,4.04e-24,43;CL:0000221,2.40e-23,44;CL:0000133,2.40e-23,44;CL:0000393,3.43e-21,39;CL:0000211,3.43e-21,39;CL:0000117,2.32e-18,23;CL:0000337,2.32e-18,23;CL:0002321,6.92e-13,70;CL:0000723,6.00e-12,91;CL:0000048,6.00e-12,91;CL:0000034,1.50e-10,97;CL:0000107,1.85e-08,9;CL:0002609,7.72e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.23e-24!73;UBERON:0005743!6.23e-24!73;UBERON:0000073!6.90e-24!75;UBERON:0001016!6.90e-24!75;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0002020!5.30e-18!34;UBERON:0002346!2.62e-15!71;UBERON:0003075!2.62e-15!71;UBERON:0007284!2.62e-15!71;UBERON:0001049!7.07e-15!52;UBERON:0005068!7.07e-15!52;UBERON:0006241!7.07e-15!52;UBERON:0007135!7.07e-15!52;UBERON:0002791!1.18e-14!29;UBERON:0003528!1.18e-14!29;UBERON:0001893!1.18e-14!29;UBERON:0003056!3.48e-13!49;UBERON:0000955!4.82e-13!50;UBERON:0006238!4.82e-13!50;UBERON:0000033!8.65e-13!63;UBERON:0003080!9.80e-13!40;UBERON:0002616!1.31e-12!49;UBERON:0002780!2.18e-12!39;UBERON:0001890!2.18e-12!39;UBERON:0006240!2.18e-12!39;UBERON:0000956!4.70e-11!21;UBERON:0001869!4.70e-11!21;UBERON:0000203!4.70e-11!21;UBERON:0000153!1.05e-10!94;UBERON:0007811!1.60e-10!86;UBERON:0002619!1.11e-09!17;UBERON:0002021!3.31e-07!10;UBERON:0000411!3.31e-07!10;UBERON:0001950!3.31e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.41e-36,73;UBERON:0001016,5.57e-35,75;UBERON:0002020,3.03e-30,34;UBERON:0004121,7.27e-26,95;UBERON:0000924,7.27e-26,95;UBERON:0006601,7.27e-26,95;UBERON:0003528,1.90e-23,29;UBERON:0002791,1.90e-23,29;UBERON:0001893,1.90e-23,29;UBERON:0000073,2.82e-23,54;UBERON:0001049,4.69e-23,52;UBERON:0005068,4.69e-23,52;UBERON:0006241,4.69e-23,52;UBERON:0007135,4.69e-23,52;UBERON:0002346,4.08e-22,64;UBERON:0003075,4.08e-22,64;UBERON:0007284,4.08e-22,64;UBERON:0003080,6.56e-19,40;UBERON:0002780,3.23e-18,39;UBERON:0001890,3.23e-18,39;UBERON:0006240,3.23e-18,39;UBERON:0010371,5.80e-18,73;UBERON:0000955,1.92e-17,47;UBERON:0006238,1.92e-17,47;UBERON:0000956,4.19e-17,21;UBERON:0001869,4.19e-17,21;UBERON:0000203,4.19e-17,21;UBERON:0002616,1.26e-16,46;UBERON:0002619,1.55e-15,17;UBERON:0003056,3.40e-15,49;UBERON:0002021,1.82e-13,10;UBERON:0000411,1.82e-13,10;UBERON:0001950,1.82e-13,10;UBERON:0010314,8.91e-13,92;UBERON:0002240,8.60e-09,6;UBERON:0005174,8.60e-09,6;UBERON:0001137,8.60e-09,6;UBERON:0002410,1.85e-08,9;UBERON:0001948,3.48e-08,5;UBERON:0002315,3.48e-08,5;UBERON:0002420,1.89e-07,8;UBERON:0007245,1.89e-07,8;UBERON:0010009,1.89e-07,8;UBERON:0010011,1.89e-07,8;UBERON:0000454,1.89e-07,8;UBERON:0011216,5.93e-07,194;UBERON:0000369,7.31e-07,5;UBERON:0002435,7.31e-07,5;UBERON:0000204,7.31e-07,5;UBERON:0010082,7.31e-07,5|phase1_expression=0.480446541314382,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0.467225281191051,0.387369970324729,0,0.234064526321993,0.171217968225505,0.159544317990673,0.342401459862411,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0,0.680346321208558,0.595745707205312,1.30599894569468,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.503587271902309,0.506884656097573,0.734187008646726,0,0.436050312760893,0.659058548203415,1.55543919259427,0.419959264876088,2.87505128729943,0.167782606057736,2.90144856804538,0.336093799142464,0.514518872071894,1.14613375975503,0,1.61853168687678,1.05798195854407,0.633831403506179,0.677689064138264,0,0,2.96659908770092,1.4209602298922,1.19840044207362,3.07374644257244,1.24427534770173,1.62007125998029,1.05162480675691,3.71346279724945,2.20868540951614,1.10241719293459,1.15014565221884,2.75765635983006,1.10115880999389,1.27687338085188,0.921639199537461,1.58263545276233,1.55528994124096,1.56274011167028,1.11673199600552,1.68828783009504,0.61119299110724,2.65165726926301,2.13557521198654,2.79599168737951,0.605809546665472,0.453429360640713,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0.340860645156116,1.55871602761721,0.70667914902068,0.845060518660083,0,0,0,0.216491041011214,0.506719730950197,1.01104889002957,0.22836775943812,0,0.445326417194474,0.693941307064543,0,0.691846491768175,0.452167921657868,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0.4853005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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:112951524..112951531,+ | |||
|description=CAGE_peak_at_chr12:112951524..112951531,+ | |||
|id=chr12:112951524..112951531,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.97e-16!44;CL:0000133!1.97e-16!44;CL:0002319!3.87e-16!43;CL:0000540!1.20e-15!33;CL:0000047!1.20e-15!33;CL:0000031!1.20e-15!33;CL:0000404!1.20e-15!33;CL:0000393!9.83e-15!39;CL:0000211!9.83e-15!39;CL:0000055!1.31e-14!50;CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0002321!6.33e-08!70;CL:0000220!6.33e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.34e-25,33;CL:0000047,8.34e-25,33;CL:0000031,8.34e-25,33;CL:0000404,8.34e-25,33;CL:0002319,4.04e-24,43;CL:0000221,2.40e-23,44;CL:0000133,2.40e-23,44;CL:0000393,3.43e-21,39;CL:0000211,3.43e-21,39;CL:0000117,2.32e-18,23;CL:0000337,2.32e-18,23;CL:0002321,6.92e-13,70;CL:0000723,6.00e-12,91;CL:0000048,6.00e-12,91;CL:0000034,1.50e-10,97;CL:0000107,1.85e-08,9;CL:0002609,7.72e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.23e-24!73;UBERON:0005743!6.23e-24!73;UBERON:0000073!6.90e-24!75;UBERON:0001016!6.90e-24!75;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0002020!5.30e-18!34;UBERON:0002346!2.62e-15!71;UBERON:0003075!2.62e-15!71;UBERON:0007284!2.62e-15!71;UBERON:0001049!7.07e-15!52;UBERON:0005068!7.07e-15!52;UBERON:0006241!7.07e-15!52;UBERON:0007135!7.07e-15!52;UBERON:0002791!1.18e-14!29;UBERON:0003528!1.18e-14!29;UBERON:0001893!1.18e-14!29;UBERON:0003056!3.48e-13!49;UBERON:0000955!4.82e-13!50;UBERON:0006238!4.82e-13!50;UBERON:0000033!8.65e-13!63;UBERON:0003080!9.80e-13!40;UBERON:0002616!1.31e-12!49;UBERON:0002780!2.18e-12!39;UBERON:0001890!2.18e-12!39;UBERON:0006240!2.18e-12!39;UBERON:0000956!4.70e-11!21;UBERON:0001869!4.70e-11!21;UBERON:0000203!4.70e-11!21;UBERON:0000153!1.05e-10!94;UBERON:0007811!1.60e-10!86;UBERON:0002619!1.11e-09!17;UBERON:0002021!3.31e-07!10;UBERON:0000411!3.31e-07!10;UBERON:0001950!3.31e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.41e-36,73;UBERON:0001016,5.57e-35,75;UBERON:0002020,3.03e-30,34;UBERON:0004121,7.27e-26,95;UBERON:0000924,7.27e-26,95;UBERON:0006601,7.27e-26,95;UBERON:0003528,1.90e-23,29;UBERON:0002791,1.90e-23,29;UBERON:0001893,1.90e-23,29;UBERON:0000073,2.82e-23,54;UBERON:0001049,4.69e-23,52;UBERON:0005068,4.69e-23,52;UBERON:0006241,4.69e-23,52;UBERON:0007135,4.69e-23,52;UBERON:0002346,4.08e-22,64;UBERON:0003075,4.08e-22,64;UBERON:0007284,4.08e-22,64;UBERON:0003080,6.56e-19,40;UBERON:0002780,3.23e-18,39;UBERON:0001890,3.23e-18,39;UBERON:0006240,3.23e-18,39;UBERON:0010371,5.80e-18,73;UBERON:0000955,1.92e-17,47;UBERON:0006238,1.92e-17,47;UBERON:0000956,4.19e-17,21;UBERON:0001869,4.19e-17,21;UBERON:0000203,4.19e-17,21;UBERON:0002616,1.26e-16,46;UBERON:0002619,1.55e-15,17;UBERON:0003056,3.40e-15,49;UBERON:0002021,1.82e-13,10;UBERON:0000411,1.82e-13,10;UBERON:0001950,1.82e-13,10;UBERON:0010314,8.91e-13,92;UBERON:0002240,8.60e-09,6;UBERON:0005174,8.60e-09,6;UBERON:0001137,8.60e-09,6;UBERON:0002410,1.85e-08,9;UBERON:0001948,3.48e-08,5;UBERON:0002315,3.48e-08,5;UBERON:0002420,1.89e-07,8;UBERON:0007245,1.89e-07,8;UBERON:0010009,1.89e-07,8;UBERON:0010011,1.89e-07,8;UBERON:0000454,1.89e-07,8;UBERON:0011216,5.93e-07,194;UBERON:0000369,7.31e-07,5;UBERON:0002435,7.31e-07,5;UBERON:0000204,7.31e-07,5;UBERON:0010082,7.31e-07,5 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0.467225281191051,0.387369970324729,0,0.234064526321993,0.171217968225505,0.159544317990673,0.342401459862411,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0,0.680346321208558,0.595745707205312,1.30599894569468,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0,0.221730510655305,0.635030673459631,1.23012957516914,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.503587271902309,0.506884656097573,0.734187008646726,0,0.436050312760893,0.659058548203415,1.55543919259427,0.419959264876088,2.87505128729943,0.167782606057736,2.90144856804538,0.336093799142464,0.514518872071894,1.14613375975503,0,1.61853168687678,1.05798195854407,0.633831403506179,0.677689064138264,0,0,2.96659908770092,1.4209602298922,1.19840044207362,3.07374644257244,1.24427534770173,1.62007125998029,1.05162480675691,3.71346279724945,2.20868540951614,1.10241719293459,1.15014565221884,2.75765635983006,1.10115880999389,1.27687338085188,0.921639199537461,1.58263545276233,1.55528994124096,1.56274011167028,1.11673199600552,1.68828783009504,0.61119299110724,2.65165726926301,2.13557521198654,2.79599168737951,0.605809546665472,0.453429360640713,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0.340860645156116,1.55871602761721,0.70667914902068,0.845060518660083,0,0,0,0.216491041011214,0.506719730950197,1.01104889002957,0.22836775943812,0,0.445326417194474,0.693941307064543,0,0.691846491768175,0.452167921657868,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0.599075622529601,0.599902730993408,0.508280908292259,1.04853447583376,2.74500361691176,1.13088916901578,0.695297280769106,1.79000820131231,0.62336413367868,1.29793010454206,0.305518091550949,0,0.758168275301024,0.210441855886474,0.520481771850815,1.37941262660084,0.180062129805349,0.90422890701429,0.816437989815934,0.896796041993948,0.843315521037559,0.517406741478031,0.646703978798527,0.567318240503458,0.703804496655795,0.657587197282725,0.834141747676794,0.348252166522167,0.411564272815887,0,0,1.02939162845886,0.284163499395593,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,1.3377599609307,0.660837565967596,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0.610953983535943,0.387904974335251,0.420814919341911,0.126473074248515,0.295220295959204,0.627994911365499,0.987177311374404,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.325929952884052,0.848725428875941,0.469380496577004,0.167506257441816,0,0.780534591431195,0.157635144106191,0.664394068946325,0.478364305972461,0.163863314715738,0.345369963731791,0,1.50791283939272,0.54390568381871,0,0.275936746304732,0.481651769963376,1.17211686592203,0.327869890753351,0.504941854408746,1.89304931649754,1.17131623288992,1.29254038639679,1.43381278771531,1.33679204449436,1.41538265394416,2.02405350837447,1.75353514746787,0.790575555893047,1.28528526568723,0.425820255624806,0.35613120733451,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.954978752025092,0.492422699235184,0,1.11255181206306,0.341741761595705,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0.747582730219894,0.827292452285488,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.39061315453185,0.734015410979976,1.69108884578204,0.288030006257865,0.948033361884535,1.01362607645082,0.616265742988964,0.51968329191118,0.716106782669926,0.79472541912506,0.721172697119813,1.18151621739662,0.403865799792591,0.533447646584999,0.403304740547362,0.584747284438515,0.577271049841977,0.584384510907845,0.226730383615211,0.665957860122194,0.807424709485281,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,3.95326289831947,1.38097570952153,2.86447756719698,3.78077001156113,1.37016503954128,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,1.55328093525546,0.518936737920883,0.399024873401031,0.682934423016537,0.24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| |||
|short_description=p@chr12:112951524..112951531,+ | |||
}} |
Latest revision as of 18:38, 4 August 2015
Short description: | p@chr12:112951524..112951531, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112951524..112951531, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.34e-25 | 33 |
neuronal stem cell | 8.34e-25 | 33 |
neuroblast | 8.34e-25 | 33 |
electrically signaling cell | 8.34e-25 | 33 |
neural cell | 4.04e-24 | 43 |
ectodermal cell | 2.40e-23 | 44 |
neurectodermal cell | 2.40e-23 | 44 |
electrically responsive cell | 3.43e-21 | 39 |
electrically active cell | 3.43e-21 | 39 |
CNS neuron (sensu Vertebrata) | 2.32e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.32e-18 | 23 |
embryonic cell | 6.92e-13 | 70 |
somatic stem cell | 6.00e-12 | 91 |
multi fate stem cell | 6.00e-12 | 91 |
stem cell | 1.50e-10 | 97 |
autonomic neuron | 1.85e-08 | 9 |
neuron of cerebral cortex | 7.72e-07 | 6 |