FFCP PHASE1:Hg19::chr9:6716152..6716196,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:6716152..6716196,+
|short_description=p11@KDM4C
|description=CAGE_peak_11_at_KDM4C_5end
|association_with_transcript=-298bp_to_uc003zkd.2,uc003zke.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-298bp_to_uc003zkd.2,uc003zke.2_5end | |||
|cluster_id=chr9:6716152..6716196,+ | |||
|description=CAGE_peak_11_at_KDM4C_5end | |||
|id=chr9:6716152..6716196,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.70e-10!52;CL:0000542!7.83e-10!53;CL:0000051!7.83e-10!53;CL:0000945!2.43e-08!24;CL:0000826!2.43e-08!24;CL:0000236!3.74e-08!14;CL:0002031!4.55e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.36e-11;24!CL:0000236;2.88e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.06e-12,24;CL:0000826,8.06e-12,24;CL:0000236,4.54e-11,14;CL:0000838,1.32e-08,52;CL:0000542,2.39e-08,53;CL:0000051,2.39e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.24e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.38e-10,106;DOID:162,1.20e-09,235;DOID:14566,3.69e-09,239;DOID:0050687,1.10e-08,143;DOID:0050686,2.35e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.40e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.93e-10;17!UBERON:0005409;9.35e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.26e-10,17;UBERON:0005409,6.22e-09,25 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,3.43860325865781,2.21671591514854,3.85682828437028,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0,0,0.485168122375632,0.232429036905685,0.822335776043652,0.929119112685311,0,0.512321413058201,0.47296445977717,1.03423704220986,1.29096936716765,0,0,0.818718450173537,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0.997318288108159,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,3.25783267057675,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,1.63841583378639,0.889509253863555,2.56038133539904,1.60158394814405,1.72425731986345,3.30522436392431,0.954053754535364,1.1384259382189,0.587237189370939,1.91136614062614,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.445641827540694,0.589211814949674,0.221533894583621,0.541607727530031,0.384273959177026,0.130059347559878,0.164437904603676,1.10540007114339,0.289803085735052,0.296573126324121,0.535081656179426,0,0.453237370790265,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0.473554504088034,0,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,4.25681995367566,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.943819157121151,0.392442930250692,0.38474715694639,0,0,0,0,10.1404027857465,0,4.13552934676983,2.6487785964879,3.81264159483652,0,0,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,3.1608175918371,2.57545848628462,0,0,0.297262324577456,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,1.03664057770386,1.58531948758658,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,1.24060815673732,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0.0920809889358963,0,0.182091168006717,0,0.902399225814824,0.0770153371044148,0,1.46139224653261,0.316654886678627,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0.219259876645935,1.0457418040996,0,0.328014645699706,0.325378394664303,3.81251743096572,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0.165284915360978,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,2.2594512186427,0,0,0.443430153536676,0,0,0.764637207142375,1.13929437434833,0.476463550915578,0.822724546172388,1.29694662238543,0.540031437238115,0,0,0,0.245040215981032,0,2.59684583357601,2.06311345710401,2.8696729091188,0,0,0,0,0.842391534340376,0,0,0,0,0,0.403599414382095,2.55507742614196,1.03051603426729,0,0,0,0,1.39203086947621,0,0,0,4.22961015263549,5.42707567183837,0,0,1.5602073798847,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0.984685914873589,0,3.95529298144223,0.211125408127993,0.19924798825107,1.10513566212459,3.77899121781414,0,0,0,0.808815160325942,1.61119057208048,0,0.197286811273867,0,0,0,0.556608588971108,0,0.7812832832557,1.92411999991631,0,0.1137934482855,0.254253650292766,1.41832609060762,1.72371686620732,0,1.73624994933292,0,0,1.52581736317083,0.552896299656123,0.591095237907095,0.219385397153973,0,0.975966209950223,0.153900517007594,0,0,1.97466817701499,3.69401064534827,0.638002319463839,0.824378340616761,1.06606955203727,1.02193298195737,0,1.66211681900156,0,0,0,0,0.317873157960757,0,0.163232808159148,6.9263005002631,0,1.99052386215701,2.38835424159016,1.83309043480088,0,0,0,0.269604531922708,0,0,2.73682183823499,7.6309201383515,2.91336455440911,2.36750641709634,0,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,0,0,4.17884191585932,1.92199335066233,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0.195551382734803,1.28254112402454,0.640358984218058,1.79828648623917,0,0,3.26030495937733,0,0.124252535565433,1.64985824231757,0,0,0,0,0,0.2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| ||
|short_description=p11@KDM4C | |||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p11@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | -298bp_to_uc003zkd.2, uc003zke.2_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.06e-12 | 24 |
pro-B cell | 8.06e-12 | 24 |
B cell | 4.54e-11 | 14 |
lymphoid lineage restricted progenitor cell | 1.32e-08 | 52 |
lymphocyte | 2.39e-08 | 53 |
common lymphoid progenitor | 2.39e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.26e-10 | 17 |
gastrointestinal system | 6.22e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.38e-10 | 106 |
cancer | 1.20e-09 | 235 |
disease of cellular proliferation | 3.69e-09 | 239 |
cell type cancer | 1.10e-08 | 143 |
organ system cancer | 2.35e-07 | 137 |