FFCP PHASE1:Mm9::chr11:76822767..76822782,+: Difference between revisions
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{{FFCP|EntrezGene=15567|HGNC=|MCL_coexpression_id=12|UniProt=Q5NCR5|association_with_transcript=0bp_to_ENSMUST00000129572_5end|description=CAGE_peak_1_at_Slc6a4_5end|id=chr11:76822767..76822782,+|ontology_enrichment_celltype=CL:0002563!8.46e-10!9;CL:0002251!8.46e-10!9;CL:0000239!1.73e-07!6;CL:0000677!1.73e-07!6;CL:0000212!1.73e-07!6;CL:0000584!1.73e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,4.21e-14,9;CL:0002251,4.21e-14,9;CL:0000239,1.36e-10,6;CL:0000677,1.36e-10,6;CL:0000584,1.36e-10,6;CL:0000075,6.41e-09,7;CL:0002076,1.35e-07,15;CL:0000066,2.66e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.33e-34!43;UBERON:0005409!3.75e-29!59;UBERON:0000344!7.34e-16!15;UBERON:0001242!7.60e-14!13;UBERON:0000060!7.60e-14!13;UBERON:0001262!7.60e-14!13;UBERON:0004786!7.60e-14!13;UBERON:0004923!5.36e-12!24;UBERON:0002108!5.06e-11!16;UBERON:0004119!1.26e-10!130;UBERON:0000925!1.26e-10!130;UBERON:0006595!1.26e-10!130;UBERON:0001007!7.55e-10!128;UBERON:0001555!7.55e-10!128;UBERON:0007026!7.55e-10!128;UBERON:0003350!8.46e-10!9;UBERON:0004808!8.46e-10!9;UBERON:0001277!8.46e-10!9;UBERON:0004921!9.49e-09!126;UBERON:0004185!9.49e-09!126;UBERON:0001045!5.39e-08!13;UBERON:0000485!1.77e-07!11;UBERON:0001264!3.28e-07!12;UBERON:0003922!3.28e-07!12;UBERON:0002114!3.28e-07!12;UBERON:0003923!3.28e-07!12;UBERON:0003924!3.28e-07!12;UBERON:0003921!3.28e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.12e-42,31;UBERON:0005409,8.16e-27,47;UBERON:0000344,2.41e-23,15;UBERON:0001242,2.87e-20,13;UBERON:0001262,2.87e-20,13;UBERON:0004786,2.87e-20,13;UBERON:0004923,1.33e-14,24;UBERON:0003350,4.21e-14,9;UBERON:0004808,4.21e-14,9;UBERON:0001277,4.21e-14,9;UBERON:0000485,3.90e-11,11;UBERON:0002108,9.87e-08,4;UBERON:0004119,1.70e-07,118;UBERON:0000925,1.70e-07,118;UBERON:0006595,1.70e-07,118;UBERON:0001264,1.91e-07,12;UBERON:0001007,3.81e-07,116;UBERON:0001555,3.81e-07,116;UBERON:0007026,3.81e-07,116|phase1_expression=0,75.7276634577414,52.7799117691862,65.9371980648889,77.6388381416838,17.7952028226603,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,36.9582496652769,46.7994933377027,55.1262685550419,46.5222955851801,45.8953725620944,83.4202811413481,80.9016716529378,23.281703618807,0,0,0,8.66554859253824,9.97407872150954,9.80012910059372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0,14.3871688446016,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,13.0474232852686,0,0,51.8577822073441,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7027158643474,73.2528069658018,0,1.39342003116263,5.15469845288373,12.7060620512706,14.4545728499166,11.4135375667535,28.4717436926707,29.810510805046,16.5881237808178,23.8747766449381,21.2510854959841,35.0539569375146,31.5561552817054,36.6419942788036,0,0.342745537829186,1.1270773567308,1.01825663922657,0.775809948670503,1.33258057791605,1.96033265085198,3.83786384746966,2.66897837330337,4.44229790118482,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98235415019888,0,0.302323556964751,1.32023555829129,0.885905678642318,1.22974059177571,3.6179961043551,2.54473610634254,3.20847640546249,3.16036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,1.87737366450968,0.42366414172764,0,0,0,0,0,0,37.018066251991,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.756037385752609,0.418176592028937,0.655087691238533,0.134864346384821,0.330613822901344,0,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.943131706930381,0.561849044819294,0.576226371643824,0.746661096422973,0.952587382566147,0.463537303779422,0.578727661391115,1.23625770240992,0.147198920134397,0.685738504770831,0.887379030796687,0.238436189947321,0.872078499793971,0.470546902076653,0.676916863133412,0.914639864363863,1.05227884575137,1.08643291076689,1.12228454331548,0.474540072496697,0.788035859004508,0.818462086339379,1.08455788830176,0.964533054905707,0,0.701794825336225,1.50409737833809,0,0,0|short_description=p1@Slc6a4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15567 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NCR5 | |||
|association_with_transcript=0bp_to_ENSMUST00000129572_5end | |||
|cluster_id=chr11:76822767..76822782,+ | |||
|description=CAGE_peak_1_at_Slc6a4_5end | |||
|id=chr11:76822767..76822782,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.46e-10!9;CL:0002251!8.46e-10!9;CL:0000239!1.73e-07!6;CL:0000677!1.73e-07!6;CL:0000212!1.73e-07!6;CL:0000584!1.73e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.21e-14,9;CL:0002251,4.21e-14,9;CL:0000239,1.36e-10,6;CL:0000677,1.36e-10,6;CL:0000584,1.36e-10,6;CL:0000075,6.41e-09,7;CL:0002076,1.35e-07,15;CL:0000066,2.66e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.33e-34!43;UBERON:0005409!3.75e-29!59;UBERON:0000344!7.34e-16!15;UBERON:0001242!7.60e-14!13;UBERON:0000060!7.60e-14!13;UBERON:0001262!7.60e-14!13;UBERON:0004786!7.60e-14!13;UBERON:0004923!5.36e-12!24;UBERON:0002108!5.06e-11!16;UBERON:0004119!1.26e-10!130;UBERON:0000925!1.26e-10!130;UBERON:0006595!1.26e-10!130;UBERON:0001007!7.55e-10!128;UBERON:0001555!7.55e-10!128;UBERON:0007026!7.55e-10!128;UBERON:0003350!8.46e-10!9;UBERON:0004808!8.46e-10!9;UBERON:0001277!8.46e-10!9;UBERON:0004921!9.49e-09!126;UBERON:0004185!9.49e-09!126;UBERON:0001045!5.39e-08!13;UBERON:0000485!1.77e-07!11;UBERON:0001264!3.28e-07!12;UBERON:0003922!3.28e-07!12;UBERON:0002114!3.28e-07!12;UBERON:0003923!3.28e-07!12;UBERON:0003924!3.28e-07!12;UBERON:0003921!3.28e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.12e-42,31;UBERON:0005409,8.16e-27,47;UBERON:0000344,2.41e-23,15;UBERON:0001242,2.87e-20,13;UBERON:0001262,2.87e-20,13;UBERON:0004786,2.87e-20,13;UBERON:0004923,1.33e-14,24;UBERON:0003350,4.21e-14,9;UBERON:0004808,4.21e-14,9;UBERON:0001277,4.21e-14,9;UBERON:0000485,3.90e-11,11;UBERON:0002108,9.87e-08,4;UBERON:0004119,1.70e-07,118;UBERON:0000925,1.70e-07,118;UBERON:0006595,1.70e-07,118;UBERON:0001264,1.91e-07,12;UBERON:0001007,3.81e-07,116;UBERON:0001555,3.81e-07,116;UBERON:0007026,3.81e-07,116 | |||
|phase1_expression=0,75.7276634577414,52.7799117691862,65.9371980648889,77.6388381416838,17.7952028226603,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,36.9582496652769,46.7994933377027,55.1262685550419,46.5222955851801,45.8953725620944,83.4202811413481,80.9016716529378,23.281703618807,0,0,0,8.66554859253824,9.97407872150954,9.80012910059372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0,14.3871688446016,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,13.0474232852686,0,0,51.8577822073441,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7027158643474,73.2528069658018,0,1.39342003116263,5.15469845288373,12.7060620512706,14.4545728499166,11.4135375667535,28.4717436926707,29.810510805046,16.5881237808178,23.8747766449381,21.2510854959841,35.0539569375146,31.5561552817054,36.6419942788036,0,0.342745537829186,1.1270773567308,1.01825663922657,0.775809948670503,1.33258057791605,1.96033265085198,3.83786384746966,2.66897837330337,4.44229790118482,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98235415019888,0,0.302323556964751,1.32023555829129,0.885905678642318,1.22974059177571,3.6179961043551,2.54473610634254,3.20847640546249,3.16036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,1.87737366450968,0.42366414172764,0,0,0,0,0,0,37.018066251991,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.756037385752609,0.418176592028937,0.655087691238533,0.134864346384821,0.330613822901344,0,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.943131706930381,0.561849044819294,0.576226371643824,0.746661096422973,0.952587382566147,0.463537303779422,0.578727661391115,1.23625770240992,0.147198920134397,0.685738504770831,0.887379030796687,0.238436189947321,0.872078499793971,0.470546902076653,0.676916863133412,0.914639864363863,1.05227884575137,1.08643291076689,1.12228454331548,0.474540072496697,0.788035859004508,0.818462086339379,1.08455788830176,0.964533054905707,0,0.701794825336225,1.50409737833809,0,0,0 | |||
|short_description=p1@Slc6a4 | |||
}} |
Latest revision as of 17:11, 25 September 2015
Short description: | p1@Slc6a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc6a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000129572_5end |
EntrezGene: | Slc6a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.21e-14 | 9 |
epithelial cell of alimentary canal | 4.21e-14 | 9 |
brush border epithelial cell | 1.36e-10 | 6 |
gut absorptive cell | 1.36e-10 | 6 |
enterocyte | 1.36e-10 | 6 |
columnar/cuboidal epithelial cell | 6.41e-09 | 7 |
endo-epithelial cell | 1.35e-07 | 15 |
epithelial cell | 2.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.12e-42 | 31 |
gastrointestinal system | 8.16e-27 | 47 |
mucosa | 2.41e-23 | 15 |
intestinal mucosa | 2.87e-20 | 13 |
wall of intestine | 2.87e-20 | 13 |
gastrointestinal system mucosa | 2.87e-20 | 13 |
organ component layer | 1.33e-14 | 24 |
epithelium of mucosa | 4.21e-14 | 9 |
gastrointestinal system epithelium | 4.21e-14 | 9 |
intestinal epithelium | 4.21e-14 | 9 |
simple columnar epithelium | 3.90e-11 | 11 |
small intestine | 9.87e-08 | 4 |
endoderm-derived structure | 1.70e-07 | 118 |
endoderm | 1.70e-07 | 118 |
presumptive endoderm | 1.70e-07 | 118 |
pancreas | 1.91e-07 | 12 |
digestive system | 3.81e-07 | 116 |
digestive tract | 3.81e-07 | 116 |
primitive gut | 3.81e-07 | 116 |